RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 WDR20Q8TBZ3 569 aa2.71□□□□□ -1.98
CHD1-201ENST00000284049 RABGGTAQ92696 567 aa2.71□□□□□ -1.98
CHD1-201ENST00000284049 HOXB13Q92826 284 aaPredicted RBP2.71□□□□□ -1.98
CHD1-201ENST00000284049 SAMD8Q96LT4 415 aa2.71□□□□□ -1.98
CHD1-201ENST00000284049 KATNBL1Q9H079 304 aa2.71□□□□□ -1.98
CHD1-201ENST00000284049 VPS33BQ9H267 617 aa2.71□□□□□ -1.98
CHD1-201ENST00000284049 HAUS4Q9H6D7 363 aa2.71□□□□□ -1.98
CHD1-201ENST00000284049 OLAHQ9NV23 265 aa2.71□□□□□ -1.98
CHD1-201ENST00000284049 B3GNT3Q9Y2A9 372 aa2.71□□□□□ -1.98
CHD1-201ENST00000284049 UTP18Q9Y5J1 556 aaKnown RBP eCLIP2.71□□□□□ -1.98
CHD1-201ENST00000284049 C4AP0C0L4 1744 aa2.71□□□□□ -1.98
CHD1-201ENST00000284049 C4BP0C0L5 1744 aa2.71□□□□□ -1.98
CHD1-201ENST00000284049 RGPD8O14715 1765 aaPredicted RBP2.71□□□□□ -1.98
CHD1-201ENST00000284049 KANSL1LA0AUZ9 987 aa2.71□□□□□ -1.98
CHD1-201ENST00000284049 EBAG9O00559 213 aa2.71□□□□□ -1.98
CHD1-201ENST00000284049 OR6B1O95007 311 aa2.71□□□□□ -1.98
CHD1-201ENST00000284049 LINGO3P0C6S8 592 aa2.71□□□□□ -1.98
CHD1-201ENST00000284049 FCGR1AP12314 374 aa2.71□□□□□ -1.98
CHD1-201ENST00000284049 ZFXP17010 805 aaPredicted RBP2.71□□□□□ -1.98
CHD1-201ENST00000284049 ECT2LQ008S8 904 aa2.71□□□□□ -1.98
CHD1-201ENST00000284049 PDE1BQ01064 536 aa2.71□□□□□ -1.98
CHD1-201ENST00000284049 FBXO43Q4G163 708 aa2.71□□□□□ -1.98
CHD1-201ENST00000284049 FBXW8Q8N3Y1 598 aa2.71□□□□□ -1.98
CHD1-201ENST00000284049 MOB3AQ96BX8 217 aa2.71□□□□□ -1.98
CHD1-201ENST00000284049 PDLIM5Q96HC4 596 aaKnown RBP2.71□□□□□ -1.98
CHD1-201ENST00000284049 ZFYVE19Q96K21 471 aa2.71□□□□□ -1.98
CHD1-201ENST00000284049 DDX50Q9BQ39 737 aaKnown RBP2.71□□□□□ -1.98
CHD1-201ENST00000284049 G6PC3Q9BUM1 346 aa2.71□□□□□ -1.98
CHD1-201ENST00000284049 STRA6Q9BX79 667 aa2.71□□□□□ -1.98
CHD1-201ENST00000284049 RPAP3Q9H6T3 665 aaPredicted RBP2.71□□□□□ -1.98
CHD1-201ENST00000284049 TCP11L1Q9NUJ3 509 aa2.71□□□□□ -1.98
CHD1-201ENST00000284049 STK39Q9UEW8 545 aa2.71□□□□□ -1.98
CHD1-201ENST00000284049 KCNJ14Q9UNX9 436 aa2.71□□□□□ -1.98
CHD1-201ENST00000284049 TMEM184BQ9Y519 407 aaPredicted RBP2.71□□□□□ -1.98
CHD1-201ENST00000284049 FAM205AQ6ZU69 1335 aa2.7□□□□□ -1.98
CHD1-201ENST00000284049 ZNF521Q96K83 1311 aa2.7□□□□□ -1.98
CHD1-201ENST00000284049 SDR42E2A6NKP2 422 aa2.7□□□□□ -1.98
CHD1-201ENST00000284049 H0YIV9 168 aa2.7□□□□□ -1.98
CHD1-201ENST00000284049 CLDN4O14493 209 aa2.7□□□□□ -1.98
CHD1-201ENST00000284049 TRIM13O60858 407 aa2.7□□□□□ -1.98
CHD1-201ENST00000284049 IL6RP08887 468 aaPredicted RBP2.7□□□□□ -1.98
CHD1-201ENST00000284049 STAG3L3P0CL85 134 aa2.7□□□□□ -1.98
CHD1-201ENST00000284049 ITGB6P18564 788 aa2.7□□□□□ -1.98
CHD1-201ENST00000284049 GNAZP19086 355 aa2.7□□□□□ -1.98
CHD1-201ENST00000284049 CCND2P30279 289 aa2.7□□□□□ -1.98
CHD1-201ENST00000284049 MC3RP41968 323 aa2.7□□□□□ -1.98
CHD1-201ENST00000284049 CACNA2D1P54289 1103 aa2.7□□□□□ -1.98
CHD1-201ENST00000284049 OLIG2Q13516 323 aa2.7□□□□□ -1.98
CHD1-201ENST00000284049 MFSD13AQ14CX5 517 aa2.7□□□□□ -1.98
CHD1-201ENST00000284049 FAM187BQ17R55 369 aa2.7□□□□□ -1.98
CHD1-201ENST00000284049 ANXA2RQ3ZCQ2 193 aa2.7□□□□□ -1.98
CHD1-201ENST00000284049 ATF7IP2Q5U623 682 aa2.7□□□□□ -1.98
CHD1-201ENST00000284049 IL23RQ5VWK5 629 aa2.7□□□□□ -1.98
CHD1-201ENST00000284049 ERICH5Q6P6B1 374 aa2.7□□□□□ -1.98
CHD1-201ENST00000284049 DOK3Q7L591 496 aa2.7□□□□□ -1.98
CHD1-201ENST00000284049 TMC8Q8IU68 726 aa2.7□□□□□ -1.98
CHD1-201ENST00000284049 ELMOD2Q8IZ81 293 aa2.7□□□□□ -1.98
CHD1-201ENST00000284049 PNPLA1Q8N8W4 532 aa2.7□□□□□ -1.98
CHD1-201ENST00000284049 SCCPDHQ8NBX0 429 aa2.7□□□□□ -1.98
CHD1-201ENST00000284049 ST6GALNAC6Q969X2 333 aa2.7□□□□□ -1.98
CHD1-201ENST00000284049 MTBPQ96DY7 904 aa2.7□□□□□ -1.98
CHD1-201ENST00000284049 RPRD1AQ96P16 312 aaPredicted RBP2.7□□□□□ -1.98
CHD1-201ENST00000284049 CRLF2Q9HC73 371 aa2.7□□□□□ -1.98
CHD1-201ENST00000284049 ZSCAN5CA6NGD5 496 aaPredicted RBP2.7□□□□□ -1.98
CHD1-201ENST00000284049 L7N2F9 121 aa2.7□□□□□ -1.98
CHD1-201ENST00000284049 WRBO00258 174 aa2.7□□□□□ -1.98
CHD1-201ENST00000284049 POLR2DO15514 142 aaKnown RBP2.7□□□□□ -1.98
CHD1-201ENST00000284049 SSX4O60224 188 aa2.7□□□□□ -1.98
CHD1-201ENST00000284049 TRIM3O75382 744 aaPredicted RBP2.7□□□□□ -1.98
CHD1-201ENST00000284049 CNTN5O94779 1100 aa2.7□□□□□ -1.98
CHD1-201ENST00000284049 GLCEO94923 617 aa2.7□□□□□ -1.98
CHD1-201ENST00000284049 ACSL3O95573 720 aa2.7□□□□□ -1.98
CHD1-201ENST00000284049 TFP02787 698 aa2.7□□□□□ -1.98
CHD1-201ENST00000284049 CD8BP10966 210 aa2.7□□□□□ -1.98
CHD1-201ENST00000284049 PPP2R1AP30153 589 aa2.7□□□□□ -1.98
CHD1-201ENST00000284049 RUNX1T1Q06455 604 aa2.7□□□□□ -1.98
CHD1-201ENST00000284049 SGCGQ13326 291 aa2.7□□□□□ -1.98
CHD1-201ENST00000284049 DOC2AQ14183 400 aa2.7□□□□□ -1.98
CHD1-201ENST00000284049 C6orf136Q5SQH8 315 aa2.7□□□□□ -1.98
CHD1-201ENST00000284049 TMEM198Q66K66 360 aa2.7□□□□□ -1.98
CHD1-201ENST00000284049 LINGO2Q7L985 606 aa2.7□□□□□ -1.98
CHD1-201ENST00000284049 C12orf76Q8N812 135 aaPredicted RBP2.7□□□□□ -1.98
CHD1-201ENST00000284049 CAGE1Q8TC20 777 aa2.7□□□□□ -1.98
CHD1-201ENST00000284049 MIPOL1Q8TD10 442 aa2.7□□□□□ -1.98
CHD1-201ENST00000284049 RIT1Q92963 219 aa2.7□□□□□ -1.98
CHD1-201ENST00000284049 RNF183Q96D59 192 aa2.7□□□□□ -1.98
CHD1-201ENST00000284049 NAF1Q96HR8 494 aaKnown RBP2.7□□□□□ -1.98
CHD1-201ENST00000284049 CNOT6LQ96LI5 555 aaKnown RBP2.7□□□□□ -1.98
CHD1-201ENST00000284049 GORASP1Q9BQQ3 440 aa2.7□□□□□ -1.98
CHD1-201ENST00000284049 ALG12Q9BV10 488 aa2.7□□□□□ -1.98
CHD1-201ENST00000284049 ALG8Q9BVK2 526 aa2.7□□□□□ -1.98
CHD1-201ENST00000284049 CDK19Q9BWU1 502 aa2.7□□□□□ -1.98
CHD1-201ENST00000284049 PRMT8Q9NR22 394 aaPredicted RBP2.7□□□□□ -1.98
CHD1-201ENST00000284049 MRPS18AQ9NVS2 196 aaKnown RBP2.7□□□□□ -1.98
CHD1-201ENST00000284049 ETAA1Q9NY74 926 aa2.7□□□□□ -1.98
CHD1-201ENST00000284049 MBD1Q9UIS9 605 aaPredicted RBP2.7□□□□□ -1.98
CHD1-201ENST00000284049 CD207Q9UJ71 328 aa2.7□□□□□ -1.98
CHD1-201ENST00000284049 TNS2Q63HR2 1409 aa2.7□□□□□ -1.98
CHD1-201ENST00000284049 SCN11AQ9UI33 1791 aa2.7□□□□□ -1.98
CHD1-201ENST00000284049 C5orf51A6NDU8 294 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms