RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 COQ6Q9Y2Z9 468 aa8.97□□□□□ -0.97
MSH4-201ENST00000263187 GREB1Q4ZG55 1949 aa8.96□□□□□ -0.97
MSH4-201ENST00000263187 DOCK4Q8N1I0 1966 aa8.96□□□□□ -0.97
MSH4-201ENST00000263187 LOC730098B7Z3J9 87 aa8.96□□□□□ -0.97
MSH4-201ENST00000263187 hCG_2039718K7EN88 272 aa8.96□□□□□ -0.97
MSH4-201ENST00000263187 ACSL4O60488 711 aa8.96□□□□□ -0.97
MSH4-201ENST00000263187 VPS4BO75351 444 aa8.96□□□□□ -0.97
MSH4-201ENST00000263187 OAZ2O95190 189 aa8.96□□□□□ -0.97
MSH4-201ENST00000263187 SERPINA1P01009 418 aa8.96□□□□□ -0.97
MSH4-201ENST00000263187 S100BP04271 92 aaPredicted RBP8.96□□□□□ -0.97
MSH4-201ENST00000263187 PRR35P0CG20 571 aa8.96□□□□□ -0.97
MSH4-201ENST00000263187 KPNA1P52294 538 aaPredicted RBP8.96□□□□□ -0.97
MSH4-201ENST00000263187 CRHR2Q13324 411 aa8.96□□□□□ -0.97
MSH4-201ENST00000263187 AQP6Q13520 282 aa8.96□□□□□ -0.97
MSH4-201ENST00000263187 CRY1Q16526 586 aa8.96□□□□□ -0.97
MSH4-201ENST00000263187 SMN1Q16637 294 aaKnown RBP8.96□□□□□ -0.97
MSH4-201ENST00000263187 BROXQ5VW32 411 aa8.96□□□□□ -0.97
MSH4-201ENST00000263187 CRTC3Q6UUV7 619 aa8.96□□□□□ -0.97
MSH4-201ENST00000263187 PTRH1Q86Y79 214 aaKnown RBP8.96□□□□□ -0.97
MSH4-201ENST00000263187 RIMKLAQ8IXN7 391 aa8.96□□□□□ -0.97
MSH4-201ENST00000263187 ADGRG2Q8IZP9 1017 aa8.96□□□□□ -0.97
MSH4-201ENST00000263187 SPARTQ8N0X7 666 aa8.96□□□□□ -0.97
MSH4-201ENST00000263187 NETO1Q8TDF5 533 aa8.96□□□□□ -0.97
MSH4-201ENST00000263187 BPIFB1Q8TDL5 484 aa8.96□□□□□ -0.97
MSH4-201ENST00000263187 SLC13A3Q8WWT9 602 aa8.96□□□□□ -0.97
MSH4-201ENST00000263187 EGLN2Q96KS0 407 aa8.96□□□□□ -0.97
MSH4-201ENST00000263187 PSKH2Q96QS6 385 aa8.96□□□□□ -0.97
MSH4-201ENST00000263187 OR52E6Q96RD3 313 aa8.96□□□□□ -0.97
MSH4-201ENST00000263187 MGME1Q9BQP7 344 aa8.96□□□□□ -0.97
MSH4-201ENST00000263187 FEM1AQ9BSK4 669 aa8.96□□□□□ -0.97
MSH4-201ENST00000263187 FUNDC2Q9BWH2 189 aa8.96□□□□□ -0.97
MSH4-201ENST00000263187 BRINP2Q9C0B6 783 aa8.96□□□□□ -0.97
MSH4-201ENST00000263187 CD320Q9NPF0 282 aa8.96□□□□□ -0.97
MSH4-201ENST00000263187 RASSF1Q9NS23 344 aa8.96□□□□□ -0.97
MSH4-201ENST00000263187 FAM118AQ9NWS6 357 aa8.96□□□□□ -0.97
MSH4-201ENST00000263187 SLC25A37Q9NYZ2 338 aa8.96□□□□□ -0.97
MSH4-201ENST00000263187 ZNF510Q9Y2H8 683 aa8.96□□□□□ -0.97
MSH4-201ENST00000263187 C2orf78A6NCI8 922 aa8.96□□□□□ -0.98
MSH4-201ENST00000263187 PRSS23O95084 383 aa8.96□□□□□ -0.98
MSH4-201ENST00000263187 VNN2O95498 520 aa8.96□□□□□ -0.98
MSH4-201ENST00000263187 PRAMEF1O95521 474 aa8.96□□□□□ -0.98
MSH4-201ENST00000263187 GLUD1P00367 558 aa8.96□□□□□ -0.98
MSH4-201ENST00000263187 HTR1AP08908 422 aa8.96□□□□□ -0.98
MSH4-201ENST00000263187 RAP2AP10114 183 aa8.96□□□□□ -0.98
MSH4-201ENST00000263187 MBL2P11226 248 aaPredicted RBP8.96□□□□□ -0.98
MSH4-201ENST00000263187 ATF6P18850 670 aa8.96□□□□□ -0.98
MSH4-201ENST00000263187 MAGP20916 626 aa8.96□□□□□ -0.98
MSH4-201ENST00000263187 HTR1EP28566 365 aa8.96□□□□□ -0.98
MSH4-201ENST00000263187 OPRL1P41146 370 aa8.96□□□□□ -0.98
MSH4-201ENST00000263187 TTPAP49638 278 aa8.96□□□□□ -0.98
MSH4-201ENST00000263187 ZXDBP98169 803 aa8.96□□□□□ -0.98
MSH4-201ENST00000263187 CYP4F3Q08477 520 aa8.96□□□□□ -0.98
MSH4-201ENST00000263187 ZNF773Q6PK81 442 aa8.96□□□□□ -0.98
MSH4-201ENST00000263187 SUSD1Q6UWL2 747 aa8.96□□□□□ -0.98
MSH4-201ENST00000263187 Q6ZNX1 250 aa8.96□□□□□ -0.98
MSH4-201ENST00000263187 SERPINA9Q86WD7 417 aa8.96□□□□□ -0.98
MSH4-201ENST00000263187 PSD4Q8NDX1 1056 aa8.96□□□□□ -0.98
MSH4-201ENST00000263187 C8orf48Q96LL4 319 aa8.96□□□□□ -0.98
MSH4-201ENST00000263187 EBPLQ9BY08 206 aa8.96□□□□□ -0.98
MSH4-201ENST00000263187 RNF38Q9H0F5 515 aa8.96□□□□□ -0.98
MSH4-201ENST00000263187 TNKS2Q9H2K2 1166 aa8.96□□□□□ -0.98
MSH4-201ENST00000263187 ASB8Q9H765 288 aa8.96□□□□□ -0.98
MSH4-201ENST00000263187 CREBZFQ9NS37 354 aa8.96□□□□□ -0.98
MSH4-201ENST00000263187 FAIMQ9NVQ4 179 aa8.96□□□□□ -0.98
MSH4-201ENST00000263187 TUBA8Q9NY65 449 aaPredicted RBP8.96□□□□□ -0.98
MSH4-201ENST00000263187 BAG5Q9UL15 447 aa8.96□□□□□ -0.98
MSH4-201ENST00000263187 TDRD15B5MCY1 1934 aaKnown RBP8.96□□□□□ -0.98
MSH4-201ENST00000263187 CXCR6O00574 342 aa8.95□□□□□ -0.98
MSH4-201ENST00000263187 ZSCAN9O15535 394 aaPredicted RBP8.95□□□□□ -0.98
MSH4-201ENST00000263187 TBC1D4O60343 1298 aa8.95□□□□□ -0.98
MSH4-201ENST00000263187 CRHBPP24387 322 aa8.95□□□□□ -0.98
MSH4-201ENST00000263187 HTR1BP28222 390 aa8.95□□□□□ -0.98
MSH4-201ENST00000263187 ATP5C1P36542 298 aaKnown RBP8.95□□□□□ -0.98
MSH4-201ENST00000263187 CLCN7P51798 805 aa8.95□□□□□ -0.98
MSH4-201ENST00000263187 YBEYP58557 167 aaPredicted RBP8.95□□□□□ -0.98
MSH4-201ENST00000263187 RHOAP61586 193 aa8.95□□□□□ -0.98
MSH4-201ENST00000263187 CBX3Q13185 183 aa8.95□□□□□ -0.98
MSH4-201ENST00000263187 DNASE1L3Q13609 305 aa8.95□□□□□ -0.98
MSH4-201ENST00000263187 DPY19L1Q2PZI1 675 aa8.95□□□□□ -0.98
MSH4-201ENST00000263187 PDCD4Q53EL6 469 aaKnown RBP8.95□□□□□ -0.98
MSH4-201ENST00000263187 TMEM236Q5W0B7 351 aa8.95□□□□□ -0.98
MSH4-201ENST00000263187 SBSNQ6UWP8 590 aa8.95□□□□□ -0.98
MSH4-201ENST00000263187 DCDC5Q6ZRR9 648 aa8.95□□□□□ -0.98
MSH4-201ENST00000263187 GALNT7Q86SF2 657 aa8.95□□□□□ -0.98
MSH4-201ENST00000263187 PROSER1Q86XN7 944 aa8.95□□□□□ -0.98
MSH4-201ENST00000263187 ZNF555Q8NEP9 628 aa8.95□□□□□ -0.98
MSH4-201ENST00000263187 OR13F1Q8NGS4 319 aa8.95□□□□□ -0.98
MSH4-201ENST00000263187 MBOAT4Q96T53 435 aa8.95□□□□□ -0.98
MSH4-201ENST00000263187 AMBNQ9NP70 447 aa8.95□□□□□ -0.98
MSH4-201ENST00000263187 PAK1IP1Q9NWT1 392 aaPredicted RBP8.95□□□□□ -0.98
MSH4-201ENST00000263187 MAGEL2Q9UJ55 1249 aa8.95□□□□□ -0.98
MSH4-201ENST00000263187 PTBP2Q9UKA9 531 aaKnown RBP8.95□□□□□ -0.98
MSH4-201ENST00000263187 PDE10AQ9Y233 779 aa8.95□□□□□ -0.98
MSH4-201ENST00000263187 TMEM88BA6NKF7 163 aa8.95□□□□□ -0.98
MSH4-201ENST00000263187 CFAP99D6REC4 459 aa8.95□□□□□ -0.98
MSH4-201ENST00000263187 TAPBPO15533 448 aa8.95□□□□□ -0.98
MSH4-201ENST00000263187 SMAD6O43541 496 aaKnown RBP8.95□□□□□ -0.98
MSH4-201ENST00000263187 CLDN7O95471 211 aa8.95□□□□□ -0.98
MSH4-201ENST00000263187 GGT1P19440 569 aa8.95□□□□□ -0.98
MSH4-201ENST00000263187 TACR1P25103 407 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms