RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 MXRA7P84157 204 aa26.93■■□□□ 1.9
SMARCD3-201ENST00000262188 PTK2BQ14289 1009 aa26.93■■□□□ 1.9
SMARCD3-201ENST00000262188 CCDC6Q16204 474 aa26.93■■□□□ 1.9
SMARCD3-201ENST00000262188 SYTL3Q4VX76 610 aa26.93■■□□□ 1.9
SMARCD3-201ENST00000262188 UGT3A1Q6NUS8 523 aa26.93■■□□□ 1.9
SMARCD3-201ENST00000262188 GBP7Q8N8V2 638 aaPredicted RBP26.93■■□□□ 1.9
SMARCD3-201ENST00000262188 OR2L2Q8NH16 312 aa26.93■■□□□ 1.9
SMARCD3-201ENST00000262188 ACMSDQ8TDX5 336 aa26.93■■□□□ 1.9
SMARCD3-201ENST00000262188 AGAP11Q8TF27 550 aa26.93■■□□□ 1.9
SMARCD3-201ENST00000262188 LINC00615Q96LM1 132 aaPredicted RBP26.93■■□□□ 1.9
SMARCD3-201ENST00000262188 COG4Q9H9E3 785 aa26.93■■□□□ 1.9
SMARCD3-201ENST00000262188 MLXIPLQ9NP71 852 aa26.93■■□□□ 1.9
SMARCD3-201ENST00000262188 DNAJC28Q9NX36 388 aa26.93■■□□□ 1.9
SMARCD3-201ENST00000262188 TMEM216Q9P0N5 145 aa26.93■■□□□ 1.9
SMARCD3-201ENST00000262188 PSMD13Q9UNM6 376 aa26.93■■□□□ 1.9
SMARCD3-201ENST00000262188 MGAT4DA6NG13 374 aa26.92■■□□□ 1.9
SMARCD3-201ENST00000262188 ZBTB14O43829 449 aa26.92■■□□□ 1.9
SMARCD3-201ENST00000262188 TYROBPO43914 113 aa26.92■■□□□ 1.9
SMARCD3-201ENST00000262188 RPL10P27635 214 aaKnown RBP26.92■■□□□ 1.9
SMARCD3-201ENST00000262188 RPA3P35244 121 aaPredicted RBP26.92■■□□□ 1.9
SMARCD3-201ENST00000262188 SPRED3Q2MJR0 410 aa26.92■■□□□ 1.9
SMARCD3-201ENST00000262188 APOPT1Q96IL0 206 aa26.92■■□□□ 1.9
SMARCD3-201ENST00000262188 GPR78Q96P69 363 aa26.92■■□□□ 1.9
SMARCD3-201ENST00000262188 TSSK1BQ9BXA7 367 aa26.92■■□□□ 1.9
SMARCD3-201ENST00000262188 POPDC3Q9HBV1 291 aa26.92■■□□□ 1.9
SMARCD3-201ENST00000262188 LATS2Q9NRM7 1088 aa26.92■■□□□ 1.9
SMARCD3-201ENST00000262188 A0A087X1B8 175 aa26.91■■□□□ 1.9
SMARCD3-201ENST00000262188 SLC5A10A0PJK1 596 aa26.91■■□□□ 1.9
SMARCD3-201ENST00000262188 PATE3B3GLJ2 98 aa26.91■■□□□ 1.9
SMARCD3-201ENST00000262188 GPR89AB7ZAQ6 455 aa26.91■■□□□ 1.9
SMARCD3-201ENST00000262188 TOR1BO14657 336 aa26.91■■□□□ 1.9
SMARCD3-201ENST00000262188 GPR89BP0CG08 455 aa26.91■■□□□ 1.9
SMARCD3-201ENST00000262188 NXPH1P58417 271 aa26.91■■□□□ 1.9
SMARCD3-201ENST00000262188 IL2P60568 153 aa26.91■■□□□ 1.9
SMARCD3-201ENST00000262188 BNC1Q01954 994 aa26.91■■□□□ 1.9
SMARCD3-201ENST00000262188 PARGQ86W56 976 aa26.91■■□□□ 1.9
SMARCD3-201ENST00000262188 TRIM42Q8IWZ5 723 aa26.91■■□□□ 1.9
SMARCD3-201ENST00000262188 ANKRD42Q8N9B4 389 aa26.91■■□□□ 1.9
SMARCD3-201ENST00000262188 MDM1Q8TC05 714 aa26.91■■□□□ 1.9
SMARCD3-201ENST00000262188 SKA2Q8WVK7 121 aaPredicted RBP26.91■■□□□ 1.9
SMARCD3-201ENST00000262188 RMI1Q9H9A7 625 aa26.91■■□□□ 1.9
SMARCD3-201ENST00000262188 SENP1Q9P0U3 644 aa26.91■■□□□ 1.9
SMARCD3-201ENST00000262188 EMCNQ9ULC0 261 aa26.91■■□□□ 1.9
SMARCD3-201ENST00000262188 TNFRSF10CO14798 259 aa26.91■■□□□ 1.9
SMARCD3-201ENST00000262188 GPC4O75487 556 aa26.91■■□□□ 1.9
SMARCD3-201ENST00000262188 APOA4P06727 396 aa26.91■■□□□ 1.9
SMARCD3-201ENST00000262188 HK3P52790 923 aa26.91■■□□□ 1.9
SMARCD3-201ENST00000262188 CTBSQ01459 385 aa26.91■■□□□ 1.9
SMARCD3-201ENST00000262188 C1orf61Q13536 156 aa26.91■■□□□ 1.9
SMARCD3-201ENST00000262188 ZRSR2Q15696 482 aaKnown RBP26.91■■□□□ 1.9
SMARCD3-201ENST00000262188 IQCHQ86VS3 1027 aa26.91■■□□□ 1.9
SMARCD3-201ENST00000262188 OXR1Q8N573 874 aa26.91■■□□□ 1.9
SMARCD3-201ENST00000262188 CCDC197Q8NCU1 140 aa26.91■■□□□ 1.9
SMARCD3-201ENST00000262188 TCP10LQ8TDR4 215 aa26.91■■□□□ 1.9
SMARCD3-201ENST00000262188 PTERQ96BW5 349 aa26.91■■□□□ 1.9
SMARCD3-201ENST00000262188 NAF1Q96HR8 494 aaKnown RBP26.91■■□□□ 1.9
SMARCD3-201ENST00000262188 MMADHCQ9H3L0 296 aaPredicted RBP26.91■■□□□ 1.9
SMARCD3-201ENST00000262188 SMOC1Q9H4F8 434 aa26.91■■□□□ 1.9
SMARCD3-201ENST00000262188 CAMSAP3Q9P1Y5 1249 aaPredicted RBP26.91■■□□□ 1.9
SMARCD3-201ENST00000262188 TMEM120BA0PK00 339 aa26.9■■□□□ 1.9
SMARCD3-201ENST00000262188 NPEPPSL1A6NEC2 478 aa26.9■■□□□ 1.9
SMARCD3-201ENST00000262188 CDC7O00311 574 aa26.9■■□□□ 1.9
SMARCD3-201ENST00000262188 VILLO15195 856 aa26.9■■□□□ 1.9
SMARCD3-201ENST00000262188 CD1DP15813 335 aa26.9■■□□□ 1.9
SMARCD3-201ENST00000262188 C21orf59P57076 290 aa26.9■■□□□ 1.9
SMARCD3-201ENST00000262188 ILF2Q12905 390 aaKnown RBP26.9■■□□□ 1.9
SMARCD3-201ENST00000262188 GBX1Q14549 363 aa26.9■■□□□ 1.9
SMARCD3-201ENST00000262188 N4BP2L1Q5TBK1 243 aaPredicted RBP26.9■■□□□ 1.9
SMARCD3-201ENST00000262188 HM13Q8TCT9 377 aa26.9■■□□□ 1.9
SMARCD3-201ENST00000262188 TMEM159Q96B96 161 aa26.9■■□□□ 1.9
SMARCD3-201ENST00000262188 SYTL2Q9HCH5 934 aa26.9■■□□□ 1.9
SMARCD3-201ENST00000262188 ANKRD6Q9Y2G4 727 aa26.9■■□□□ 1.9
SMARCD3-201ENST00000262188 ACTL7BQ9Y614 415 aa26.9■■□□□ 1.9
SMARCD3-201ENST00000262188 WDR87Q6ZQQ6 2873 aa26.89■■□□□ 1.9
SMARCD3-201ENST00000262188 KRT87PA6NCN2 255 aa26.89■■□□□ 1.9
SMARCD3-201ENST00000262188 KLHL2O95198 593 aa26.89■■□□□ 1.9
SMARCD3-201ENST00000262188 LTA4HP09960 611 aaKnown RBP26.89■■□□□ 1.9
SMARCD3-201ENST00000262188 PHACTR4Q8IZ21 702 aa26.89■■□□□ 1.9
SMARCD3-201ENST00000262188 MGARPQ8TDB4 240 aa26.89■■□□□ 1.9
SMARCD3-201ENST00000262188 ASZ1Q8WWH4 475 aa26.89■■□□□ 1.9
SMARCD3-201ENST00000262188 CNOT10Q9H9A5 744 aaKnown RBP26.89■■□□□ 1.9
SMARCD3-201ENST00000262188 SNX11Q9Y5W9 270 aa26.89■■□□□ 1.9
SMARCD3-201ENST00000262188 TP53BP1Q12888 1972 aaPredicted RBP26.89■■□□□ 1.9
SMARCD3-201ENST00000262188 A0A1B0GTW7 788 aa26.89■■□□□ 1.89
SMARCD3-201ENST00000262188 CRHR1P34998 444 aa26.89■■□□□ 1.89
SMARCD3-201ENST00000262188 KCNC1P48547 511 aa26.89■■□□□ 1.89
SMARCD3-201ENST00000262188 ABRQ12979 859 aa26.89■■□□□ 1.89
SMARCD3-201ENST00000262188 KIF19Q2TAC6 998 aa26.89■■□□□ 1.89
SMARCD3-201ENST00000262188 TTLL9Q3SXZ7 439 aa26.89■■□□□ 1.89
SMARCD3-201ENST00000262188 PLEKHS1Q5SXH7 462 aa26.89■■□□□ 1.89
SMARCD3-201ENST00000262188 CYHR1Q6ZMK1 362 aa26.89■■□□□ 1.89
SMARCD3-201ENST00000262188 CFAP61Q8NHU2 1237 aa26.89■■□□□ 1.89
SMARCD3-201ENST00000262188 FAM111AQ96PZ2 611 aa26.89■■□□□ 1.89
SMARCD3-201ENST00000262188 ALG9Q9H6U8 611 aa26.89■■□□□ 1.89
SMARCD3-201ENST00000262188 ADAMTS6Q9UKP5 1117 aa26.89■■□□□ 1.89
SMARCD3-201ENST00000262188 TMCO1Q9UM00 188 aa26.89■■□□□ 1.89
SMARCD3-201ENST00000262188 LRRC42Q9Y546 428 aa26.89■■□□□ 1.89
SMARCD3-201ENST00000262188 SNX2O60749 519 aa26.88■■□□□ 1.89
SMARCD3-201ENST00000262188 EML2O95834 649 aa26.88■■□□□ 1.89
SMARCD3-201ENST00000262188 TNFP01375 233 aa26.88■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms