RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 EPHX3Q9H6B9 360 aa21.88■■□□□ 1.09
SIX3-201ENST00000260653 KLC4Q9NSK0 619 aa21.88■■□□□ 1.09
SIX3-201ENST00000260653 SLC5A10A0PJK1 596 aa21.87■■□□□ 1.09
SIX3-201ENST00000260653 UBDO15205 165 aa21.87■■□□□ 1.09
SIX3-201ENST00000260653 GRSF1Q12849 480 aaKnown RBP eCLIP21.87■■□□□ 1.09
SIX3-201ENST00000260653 TRAF3Q13114 568 aa21.87■■□□□ 1.09
SIX3-201ENST00000260653 BCL7AQ4VC05 210 aa21.87■■□□□ 1.09
SIX3-201ENST00000260653 HEATR4Q86WZ0 1026 aa21.87■■□□□ 1.09
SIX3-201ENST00000260653 OR4F6Q8NGB9 312 aa21.87■■□□□ 1.09
SIX3-201ENST00000260653 CFAP61Q8NHU2 1237 aa21.87■■□□□ 1.09
SIX3-201ENST00000260653 GLMNQ92990 594 aa21.87■■□□□ 1.09
SIX3-201ENST00000260653 ATP6V1E2Q96A05 226 aa21.87■■□□□ 1.09
SIX3-201ENST00000260653 HIC2Q96JB3 615 aa21.87■■□□□ 1.09
SIX3-201ENST00000260653 PRR23AA6NEV1 266 aa21.87■■□□□ 1.09
SIX3-201ENST00000260653 KATNA1O75449 491 aa21.87■■□□□ 1.09
SIX3-201ENST00000260653 ZNF8P17098 575 aaPredicted RBP21.87■■□□□ 1.09
SIX3-201ENST00000260653 PDHA2P29803 388 aa21.87■■□□□ 1.09
SIX3-201ENST00000260653 PRDX6P30041 224 aa21.87■■□□□ 1.09
SIX3-201ENST00000260653 ABRQ12979 859 aa21.87■■□□□ 1.09
SIX3-201ENST00000260653 ZNF658BQ4V348 819 aaPredicted RBP21.87■■□□□ 1.09
SIX3-201ENST00000260653 PNCKQ6P2M8 343 aa21.87■■□□□ 1.09
SIX3-201ENST00000260653 ZNF547Q8IVP9 402 aa21.87■■□□□ 1.09
SIX3-201ENST00000260653 NUSAP1Q9BXS6 441 aaKnown RBP21.87■■□□□ 1.09
SIX3-201ENST00000260653 TRIM54Q9BYV2 358 aa21.87■■□□□ 1.09
SIX3-201ENST00000260653 C8orf33Q9H7E9 229 aaPredicted RBP21.87■■□□□ 1.09
SIX3-201ENST00000260653 UBE2ZQ9H832 354 aaPredicted RBP21.87■■□□□ 1.09
SIX3-201ENST00000260653 POLG2Q9UHN1 485 aa21.87■■□□□ 1.09
SIX3-201ENST00000260653 ZFR2Q9UPR6 939 aaKnown RBP21.87■■□□□ 1.09
SIX3-201ENST00000260653 TMEM98Q9Y2Y6 226 aa21.87■■□□□ 1.09
SIX3-201ENST00000260653 ANGPTL3Q9Y5C1 460 aa21.87■■□□□ 1.09
SIX3-201ENST00000260653 K7EPI3 171 aa21.86■■□□□ 1.09
SIX3-201ENST00000260653 SOX1O00570 391 aaPredicted RBP21.86■■□□□ 1.09
SIX3-201ENST00000260653 NARSO43776 548 aaKnown RBP21.86■■□□□ 1.09
SIX3-201ENST00000260653 STK16O75716 305 aa21.86■■□□□ 1.09
SIX3-201ENST00000260653 MATN4O95460 622 aa21.86■■□□□ 1.09
SIX3-201ENST00000260653 HIST1H2AGP0C0S8 130 aaPredicted RBP21.86■■□□□ 1.09
SIX3-201ENST00000260653 HIST1H2ADP20671 130 aa21.86■■□□□ 1.09
SIX3-201ENST00000260653 CYP2A7P20853 494 aa21.86■■□□□ 1.09
SIX3-201ENST00000260653 DRD1P21728 446 aa21.86■■□□□ 1.09
SIX3-201ENST00000260653 CPOXP36551 454 aa21.86■■□□□ 1.09
SIX3-201ENST00000260653 CDKL1Q00532 357 aa21.86■■□□□ 1.09
SIX3-201ENST00000260653 SMAD4Q13485 552 aaKnown RBP21.86■■□□□ 1.09
SIX3-201ENST00000260653 CRTC3Q6UUV7 619 aa21.86■■□□□ 1.09
SIX3-201ENST00000260653 SCIMPQ6UWF3 145 aa21.86■■□□□ 1.09
SIX3-201ENST00000260653 SNX32Q86XE0 403 aa21.86■■□□□ 1.09
SIX3-201ENST00000260653 RASGRP3Q8IV61 690 aa21.86■■□□□ 1.09
SIX3-201ENST00000260653 MCUR1Q96AQ8 359 aa21.86■■□□□ 1.09
SIX3-201ENST00000260653 HIST1H2AHQ96KK5 128 aa21.86■■□□□ 1.09
SIX3-201ENST00000260653 HIST1H2AJQ99878 128 aa21.86■■□□□ 1.09
SIX3-201ENST00000260653 H2AFJQ9BTM1 129 aa21.86■■□□□ 1.09
SIX3-201ENST00000260653 COLQQ9Y215 455 aaPredicted RBP21.86■■□□□ 1.09
SIX3-201ENST00000260653 SLC22A2O15244 555 aa21.86■■□□□ 1.09
SIX3-201ENST00000260653 SLC16A5O15375 505 aa21.86■■□□□ 1.09
SIX3-201ENST00000260653 MGRN1O60291 552 aa21.86■■□□□ 1.09
SIX3-201ENST00000260653 OTCP00480 354 aa21.86■■□□□ 1.09
SIX3-201ENST00000260653 DNTTP04053 509 aa21.86■■□□□ 1.09
SIX3-201ENST00000260653 GSTM1P09488 218 aa21.86■■□□□ 1.09
SIX3-201ENST00000260653 SLC25A3Q00325 362 aa21.86■■□□□ 1.09
SIX3-201ENST00000260653 GSTM4Q03013 218 aa21.86■■□□□ 1.09
SIX3-201ENST00000260653 FGL2Q14314 439 aa21.86■■□□□ 1.09
SIX3-201ENST00000260653 CDKL4Q5MAI5 379 aa21.86■■□□□ 1.09
SIX3-201ENST00000260653 ADAMTSL4Q6UY14 1074 aa21.86■■□□□ 1.09
SIX3-201ENST00000260653 FAM13CQ8NE31 585 aa21.86■■□□□ 1.09
SIX3-201ENST00000260653 KLK6Q92876 244 aa21.86■■□□□ 1.09
SIX3-201ENST00000260653 COX14Q96I36 57 aa21.86■■□□□ 1.09
SIX3-201ENST00000260653 CD248Q9HCU0 757 aa21.86■■□□□ 1.09
SIX3-201ENST00000260653 PCYT1BQ9Y5K3 369 aaPredicted RBP21.86■■□□□ 1.09
SIX3-201ENST00000260653 ST14Q9Y5Y6 855 aa21.86■■□□□ 1.09
SIX3-201ENST00000260653 CHEK2O96017 543 aa21.85■■□□□ 1.09
SIX3-201ENST00000260653 CAPN1P07384 714 aa21.85■■□□□ 1.09
SIX3-201ENST00000260653 ALDOCP09972 364 aaKnown RBP21.85■■□□□ 1.09
SIX3-201ENST00000260653 MNAT1P51948 309 aa21.85■■□□□ 1.09
SIX3-201ENST00000260653 CCNG1P51959 295 aa21.85■■□□□ 1.09
SIX3-201ENST00000260653 GTF2H3Q13889 308 aa21.85■■□□□ 1.09
SIX3-201ENST00000260653 GRB7Q14451 532 aa21.85■■□□□ 1.09
SIX3-201ENST00000260653 DOK6Q6PKX4 331 aa21.85■■□□□ 1.09
SIX3-201ENST00000260653 OR14C36Q8NHC7 312 aa21.85■■□□□ 1.09
SIX3-201ENST00000260653 HMGCLL1Q8TB92 370 aa21.85■■□□□ 1.09
SIX3-201ENST00000260653 KCNV2Q8TDN2 545 aa21.85■■□□□ 1.09
SIX3-201ENST00000260653 DNASE1L2Q92874 299 aa21.85■■□□□ 1.09
SIX3-201ENST00000260653 TUBGCP3Q96CW5 907 aa21.85■■□□□ 1.09
SIX3-201ENST00000260653 LGR4Q9BXB1 951 aa21.85■■□□□ 1.09
SIX3-201ENST00000260653 C1orf21Q9H246 121 aa21.85■■□□□ 1.09
SIX3-201ENST00000260653 MBNL1Q9NR56 388 aaKnown RBP21.85■■□□□ 1.09
SIX3-201ENST00000260653 PABPN1LA6NDY0 278 aaKnown RBP21.85■■□□□ 1.09
SIX3-201ENST00000260653 ARHGEF33A8MVX0 844 aa21.85■■□□□ 1.09
SIX3-201ENST00000260653 ADSLP30566 484 aaPredicted RBP21.85■■□□□ 1.09
SIX3-201ENST00000260653 SKIV2LQ15477 1246 aaKnown RBP21.85■■□□□ 1.09
SIX3-201ENST00000260653 EEF1AKMT2Q5JPI9 291 aaKnown RBP21.85■■□□□ 1.09
SIX3-201ENST00000260653 SLC22A15Q8IZD6 547 aa21.85■■□□□ 1.09
SIX3-201ENST00000260653 SNX31Q8N9S9 440 aa21.85■■□□□ 1.09
SIX3-201ENST00000260653 MCOLN3Q8TDD5 553 aa21.85■■□□□ 1.09
SIX3-201ENST00000260653 OSBPL6Q9BZF3 934 aa21.85■■□□□ 1.09
SIX3-201ENST00000260653 PSIP1O75475 530 aaKnown RBP21.84■■□□□ 1.09
SIX3-201ENST00000260653 PAK4O96013 591 aaPredicted RBP21.84■■□□□ 1.09
SIX3-201ENST00000260653 CDK3Q00526 305 aa21.84■■□□□ 1.09
SIX3-201ENST00000260653 CUL3Q13618 768 aa21.84■■□□□ 1.09
SIX3-201ENST00000260653 PLA2G4EQ3MJ16 856 aa21.84■■□□□ 1.09
SIX3-201ENST00000260653 MILR1Q7Z6M3 343 aa21.84■■□□□ 1.09
SIX3-201ENST00000260653 CFAP206Q8IYR0 622 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms