RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 GBA3Q9H227 469 aa7.41□□□□□ -1.22
RIF1-201ENST00000243326 ABCC13Q9NSE7 274 aa7.41□□□□□ -1.22
RIF1-201ENST00000243326 LDB2O43679 373 aa7.41□□□□□ -1.22
RIF1-201ENST00000243326 GAS2O43903 313 aaKnown RBP7.41□□□□□ -1.22
RIF1-201ENST00000243326 MATKP42679 507 aa7.41□□□□□ -1.22
RIF1-201ENST00000243326 ZACNQ401N2 412 aa7.41□□□□□ -1.22
RIF1-201ENST00000243326 SYPL2Q5VXT5 272 aa7.41□□□□□ -1.22
RIF1-201ENST00000243326 TEX19Q8NA77 164 aa7.41□□□□□ -1.22
RIF1-201ENST00000243326 HSFY1Q96LI6 401 aa7.41□□□□□ -1.22
RIF1-201ENST00000243326 KLF15Q9UIH9 416 aa7.41□□□□□ -1.22
RIF1-201ENST00000243326 HSPB11Q9Y547 144 aa7.41□□□□□ -1.22
RIF1-201ENST00000243326 RNASEH2AO75792 299 aaKnown RBP7.41□□□□□ -1.22
RIF1-201ENST00000243326 PLATP00750 562 aa7.41□□□□□ -1.22
RIF1-201ENST00000243326 RPLP0P05388 317 aaKnown RBP7.41□□□□□ -1.22
RIF1-201ENST00000243326 STAT5AP42229 794 aa7.41□□□□□ -1.22
RIF1-201ENST00000243326 HNRNPA0Q13151 305 aaKnown RBP7.41□□□□□ -1.22
RIF1-201ENST00000243326 ZNF627Q7L945 461 aa7.41□□□□□ -1.22
RIF1-201ENST00000243326 Q96MT0 163 aa7.41□□□□□ -1.22
RIF1-201ENST00000243326 PEBP4Q96S96 227 aa7.41□□□□□ -1.22
RIF1-201ENST00000243326 RIPK3Q9Y572 518 aa7.41□□□□□ -1.22
RIF1-201ENST00000243326 UBIAD1Q9Y5Z9 338 aa7.41□□□□□ -1.22
RIF1-201ENST00000243326 F5P12259 2224 aa7.41□□□□□ -1.22
RIF1-201ENST00000243326 ATP5BP06576 529 aaKnown RBP7.41□□□□□ -1.22
RIF1-201ENST00000243326 PBX3P40426 434 aa7.41□□□□□ -1.22
RIF1-201ENST00000243326 SP140Q13342 867 aa7.41□□□□□ -1.22
RIF1-201ENST00000243326 UBE2UQ5VVX9 321 aa7.41□□□□□ -1.22
RIF1-201ENST00000243326 FBXL19Q6PCT2 694 aa7.41□□□□□ -1.22
RIF1-201ENST00000243326 PARK7Q99497 189 aaKnown RBP7.41□□□□□ -1.22
RIF1-201ENST00000243326 SORCS3Q9UPU3 1222 aa7.41□□□□□ -1.22
RIF1-201ENST00000243326 SPACA6W5XKT8 324 aa7.41□□□□□ -1.22
RIF1-201ENST00000243326 SDC2P34741 201 aa7.41□□□□□ -1.22
RIF1-201ENST00000243326 DUSP4Q13115 394 aa7.41□□□□□ -1.22
RIF1-201ENST00000243326 KAT8Q9H7Z6 458 aaKnown RBP7.41□□□□□ -1.22
RIF1-201ENST00000243326 ZNF232Q9UNY5 417 aa7.41□□□□□ -1.22
RIF1-201ENST00000243326 C5orf51A6NDU8 294 aa7.41□□□□□ -1.22
RIF1-201ENST00000243326 KCNC4Q03721 635 aa7.41□□□□□ -1.22
RIF1-201ENST00000243326 OR4F3Q6IEY1 312 aa7.41□□□□□ -1.22
RIF1-201ENST00000243326 TNFAIP8L1Q8WVP5 186 aa7.41□□□□□ -1.22
RIF1-201ENST00000243326 SERPINB11Q96P15 392 aa7.41□□□□□ -1.22
RIF1-201ENST00000243326 SLC39A8Q9C0K1 460 aa7.41□□□□□ -1.22
RIF1-201ENST00000243326 GMPR2Q9P2T1 348 aaKnown RBP7.41□□□□□ -1.22
RIF1-201ENST00000243326 TIMM8BQ9Y5J9 83 aaPredicted RBP7.41□□□□□ -1.22
RIF1-201ENST00000243326 RAI2Q9Y5P3 530 aa7.41□□□□□ -1.22
RIF1-201ENST00000243326 ZFP37Q9Y6Q3 630 aaPredicted RBP7.41□□□□□ -1.22
RIF1-201ENST00000243326 CLUHO75153 1309 aa7.41□□□□□ -1.22
RIF1-201ENST00000243326 ECI2O75521 394 aa7.4□□□□□ -1.22
RIF1-201ENST00000243326 TBX18O95935 607 aa7.4□□□□□ -1.22
RIF1-201ENST00000243326 CHRM1P11229 460 aaPredicted RBP7.4□□□□□ -1.22
RIF1-201ENST00000243326 SERPINA4P29622 427 aa7.4□□□□□ -1.22
RIF1-201ENST00000243326 CRY2Q49AN0 593 aa7.4□□□□□ -1.22
RIF1-201ENST00000243326 HLA-DQA1Q5Y7H0 255 aa7.4□□□□□ -1.22
RIF1-201ENST00000243326 USP45Q70EL2 814 aa7.4□□□□□ -1.22
RIF1-201ENST00000243326 GATAD2BQ8WXI9 593 aa7.4□□□□□ -1.22
RIF1-201ENST00000243326 LMLNQ96KR4 655 aa7.4□□□□□ -1.22
RIF1-201ENST00000243326 PCDHB12Q9Y5F1 795 aa7.4□□□□□ -1.22
RIF1-201ENST00000243326 NEDD8-MDP1E9PL57 170 aa7.4□□□□□ -1.22
RIF1-201ENST00000243326 H7C4K7 107 aa7.4□□□□□ -1.22
RIF1-201ENST00000243326 NRP1O14786 923 aa7.4□□□□□ -1.22
RIF1-201ENST00000243326 ZXDBP98169 803 aa7.4□□□□□ -1.22
RIF1-201ENST00000243326 CYP2A13Q16696 494 aa7.4□□□□□ -1.22
RIF1-201ENST00000243326 XRRA1Q6P2D8 792 aa7.4□□□□□ -1.22
RIF1-201ENST00000243326 ZCCHC12Q6PEW1 402 aa7.4□□□□□ -1.22
RIF1-201ENST00000243326 DEFB132Q7Z7B7 95 aa7.4□□□□□ -1.22
RIF1-201ENST00000243326 NAT8LQ8N9F0 302 aa7.4□□□□□ -1.22
RIF1-201ENST00000243326 SCAMP5Q8TAC9 235 aa7.4□□□□□ -1.22
RIF1-201ENST00000243326 PKP4Q99569 1192 aa7.4□□□□□ -1.22
RIF1-201ENST00000243326 S100A13Q99584 98 aa7.4□□□□□ -1.22
RIF1-201ENST00000243326 CARD8Q9Y2G2 431 aa7.4□□□□□ -1.22
RIF1-201ENST00000243326 TTC3P53804 2025 aa7.4□□□□□ -1.22
RIF1-201ENST00000243326 PER2O15055 1255 aa7.4□□□□□ -1.22
RIF1-201ENST00000243326 TNFRSF1BP20333 461 aa7.4□□□□□ -1.22
RIF1-201ENST00000243326 RXRGP48443 463 aa7.4□□□□□ -1.22
RIF1-201ENST00000243326 CDKL1Q00532 357 aa7.4□□□□□ -1.22
RIF1-201ENST00000243326 SF1Q15637 639 aaKnown RBP7.4□□□□□ -1.22
RIF1-201ENST00000243326 OGFRL1Q5TC84 451 aaPredicted RBP7.4□□□□□ -1.22
RIF1-201ENST00000243326 NKAPQ8N5F7 415 aaKnown RBP7.4□□□□□ -1.22
RIF1-201ENST00000243326 MOSPD2Q8NHP6 518 aa7.4□□□□□ -1.22
RIF1-201ENST00000243326 PSMG2Q969U7 264 aa7.4□□□□□ -1.22
RIF1-201ENST00000243326 SLC15A5A6NIM6 579 aa7.4□□□□□ -1.22
RIF1-201ENST00000243326 ALPIP09923 528 aa7.4□□□□□ -1.22
RIF1-201ENST00000243326 ADRA2BP18089 450 aa7.4□□□□□ -1.22
RIF1-201ENST00000243326 XIAPP98170 497 aa7.4□□□□□ -1.22
RIF1-201ENST00000243326 ZBED5Q49AG3 693 aa7.4□□□□□ -1.22
RIF1-201ENST00000243326 CXorf40AQ8TE69 158 aa7.4□□□□□ -1.22
RIF1-201ENST00000243326 MTA2O94776 668 aa7.4□□□□□ -1.22
RIF1-201ENST00000243326 OXSR1O95747 527 aaPredicted RBP7.4□□□□□ -1.22
RIF1-201ENST00000243326 ALPPL2P10696 532 aa7.4□□□□□ -1.22
RIF1-201ENST00000243326 CDK18Q07002 472 aa7.4□□□□□ -1.22
RIF1-201ENST00000243326 FAM92BQ6ZTR7 304 aa7.4□□□□□ -1.22
RIF1-201ENST00000243326 GRHL3Q8TE85 626 aa7.4□□□□□ -1.22
RIF1-201ENST00000243326 SKA1Q96BD8 255 aa7.4□□□□□ -1.22
RIF1-201ENST00000243326 BIRC7Q96CA5 298 aa7.4□□□□□ -1.22
RIF1-201ENST00000243326 HTATIP2Q9BUP3 242 aa7.4□□□□□ -1.22
RIF1-201ENST00000243326 A0A0U1RQS6 177 aa7.4□□□□□ -1.22
RIF1-201ENST00000243326 CCNB2O95067 398 aa7.4□□□□□ -1.22
RIF1-201ENST00000243326 URODP06132 367 aa7.4□□□□□ -1.22
RIF1-201ENST00000243326 TKTP29401 623 aaKnown RBP7.4□□□□□ -1.22
RIF1-201ENST00000243326 PCLAFQ15004 111 aa7.4□□□□□ -1.22
RIF1-201ENST00000243326 SHFQ7M4L6 423 aa7.4□□□□□ -1.22
RIF1-201ENST00000243326 CEP97Q8IW35 865 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms