RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 ITM2CQ9NQX7 267 aa14.81□□□□□ -0.04
EFNB1-201ENST00000204961 NLE1Q9NVX2 485 aaPredicted RBP14.81□□□□□ -0.04
EFNB1-201ENST00000204961 PCDHGA4Q9Y5G9 962 aa14.81□□□□□ -0.04
EFNB1-201ENST00000204961 GMEB1Q9Y692 573 aa14.81□□□□□ -0.04
EFNB1-201ENST00000204961 M0R129 80 aa14.81□□□□□ -0.04
EFNB1-201ENST00000204961 PFKLP17858 780 aa14.81□□□□□ -0.04
EFNB1-201ENST00000204961 PSMB9P28065 219 aa14.81□□□□□ -0.04
EFNB1-201ENST00000204961 KPNA1P52294 538 aaPredicted RBP14.81□□□□□ -0.04
EFNB1-201ENST00000204961 ARF5P84085 180 aa14.81□□□□□ -0.04
EFNB1-201ENST00000204961 KCNAB2Q13303 367 aa14.81□□□□□ -0.04
EFNB1-201ENST00000204961 RCAN2Q14206 197 aa14.81□□□□□ -0.04
EFNB1-201ENST00000204961 NR1D2Q14995 579 aa14.81□□□□□ -0.04
EFNB1-201ENST00000204961 FAM98BQ52LJ0 330 aaKnown RBP14.81□□□□□ -0.04
EFNB1-201ENST00000204961 ZNF621Q6ZSS3 439 aa14.81□□□□□ -0.04
EFNB1-201ENST00000204961 VTCN1Q7Z7D3 282 aa14.81□□□□□ -0.04
EFNB1-201ENST00000204961 TMCO5AQ8N6Q1 288 aa14.81□□□□□ -0.04
EFNB1-201ENST00000204961 FBXO22Q8NEZ5 403 aa14.81□□□□□ -0.04
EFNB1-201ENST00000204961 GPR156Q8NFN8 814 aa14.81□□□□□ -0.04
EFNB1-201ENST00000204961 OR52J3Q8NH60 311 aa14.81□□□□□ -0.04
EFNB1-201ENST00000204961 FAM120BQ96EK7 910 aaKnown RBP14.81□□□□□ -0.04
EFNB1-201ENST00000204961 ZBTB18Q99592 522 aa14.81□□□□□ -0.04
EFNB1-201ENST00000204961 SEZ6LQ9BYH1 1024 aa14.81□□□□□ -0.04
EFNB1-201ENST00000204961 OSBPL6Q9BZF3 934 aa14.81□□□□□ -0.04
EFNB1-201ENST00000204961 DERL2Q9GZP9 239 aa14.81□□□□□ -0.04
EFNB1-201ENST00000204961 TRNAU1APQ9NX07 287 aaKnown RBP14.81□□□□□ -0.04
EFNB1-201ENST00000204961 OPTCQ9UBM4 332 aa14.81□□□□□ -0.04
EFNB1-201ENST00000204961 EYSQ5T1H1 3165 aa14.8□□□□□ -0.04
EFNB1-201ENST00000204961 SEPT4O43236 478 aa14.8□□□□□ -0.04
EFNB1-201ENST00000204961 TSPAN12O95859 305 aa14.8□□□□□ -0.04
EFNB1-201ENST00000204961 THRBP10828 461 aa14.8□□□□□ -0.04
EFNB1-201ENST00000204961 MAGEA8P43361 318 aa14.8□□□□□ -0.04
EFNB1-201ENST00000204961 CYP4F8P98187 520 aa14.8□□□□□ -0.04
EFNB1-201ENST00000204961 CHRNA6Q15825 494 aa14.8□□□□□ -0.04
EFNB1-201ENST00000204961 ATP6AP1Q15904 470 aa14.8□□□□□ -0.04
EFNB1-201ENST00000204961 ZBED5Q49AG3 693 aa14.8□□□□□ -0.04
EFNB1-201ENST00000204961 HID1Q8IV36 788 aa14.8□□□□□ -0.04
EFNB1-201ENST00000204961 RGL4Q8IZJ4 473 aa14.8□□□□□ -0.04
EFNB1-201ENST00000204961 NKAPQ8N5F7 415 aaKnown RBP14.8□□□□□ -0.04
EFNB1-201ENST00000204961 SLC15A4Q8N697 577 aa14.8□□□□□ -0.04
EFNB1-201ENST00000204961 ZBTB8BQ8NAP8 495 aaPredicted RBP14.8□□□□□ -0.04
EFNB1-201ENST00000204961 ACTL8Q9H568 366 aa14.8□□□□□ -0.04
EFNB1-201ENST00000204961 MYO15AQ9UKN7 3530 aa14.8□□□□□ -0.04
EFNB1-201ENST00000204961 OR2AG2A6NM03 316 aa14.8□□□□□ -0.04
EFNB1-201ENST00000204961 AQP12BA6NM10 295 aa14.8□□□□□ -0.04
EFNB1-201ENST00000204961 PRMT5O14744 637 aaPredicted RBP14.8□□□□□ -0.04
EFNB1-201ENST00000204961 SEC24AO95486 1093 aa14.8□□□□□ -0.04
EFNB1-201ENST00000204961 CKMP06732 381 aa14.8□□□□□ -0.04
EFNB1-201ENST00000204961 ANXA6P08133 673 aa14.8□□□□□ -0.04
EFNB1-201ENST00000204961 CYBAP13498 195 aa14.8□□□□□ -0.04
EFNB1-201ENST00000204961 EPHA2P29317 976 aa14.8□□□□□ -0.04
EFNB1-201ENST00000204961 POLD2P49005 469 aa14.8□□□□□ -0.04
EFNB1-201ENST00000204961 MFSD4BQ5TF39 518 aa14.8□□□□□ -0.04
EFNB1-201ENST00000204961 TMEM236Q5W0B7 351 aa14.8□□□□□ -0.04
EFNB1-201ENST00000204961 SULT1C3Q6IMI6 304 aa14.8□□□□□ -0.04
EFNB1-201ENST00000204961 AQP12AQ8IXF9 295 aa14.8□□□□□ -0.04
EFNB1-201ENST00000204961 SELENOMQ8WWX9 145 aa14.8□□□□□ -0.04
EFNB1-201ENST00000204961 STARD7Q9NQZ5 370 aa14.8□□□□□ -0.04
EFNB1-201ENST00000204961 DLGAP4Q9Y2H0 992 aa14.8□□□□□ -0.04
EFNB1-201ENST00000204961 TDRD15B5MCY1 1934 aaKnown RBP14.79□□□□□ -0.04
EFNB1-201ENST00000204961 OR7A17O14581 309 aa14.79□□□□□ -0.04
EFNB1-201ENST00000204961 DEAF1O75398 565 aaPredicted RBP14.79□□□□□ -0.04
EFNB1-201ENST00000204961 VNN2O95498 520 aa14.79□□□□□ -0.04
EFNB1-201ENST00000204961 BCL10O95999 233 aa14.79□□□□□ -0.04
EFNB1-201ENST00000204961 OPN1SWP03999 348 aa14.79□□□□□ -0.04
EFNB1-201ENST00000204961 OCM2P0CE71 109 aa14.79□□□□□ -0.04
EFNB1-201ENST00000204961 OCMP0CE72 109 aaPredicted RBP14.79□□□□□ -0.04
EFNB1-201ENST00000204961 COL6A1P12109 1028 aa14.79□□□□□ -0.04
EFNB1-201ENST00000204961 HALP42357 657 aa14.79□□□□□ -0.04
EFNB1-201ENST00000204961 ACLYP53396 1101 aa14.79□□□□□ -0.04
EFNB1-201ENST00000204961 MLLT10P55197 1068 aa14.79□□□□□ -0.04
EFNB1-201ENST00000204961 ZNF33AQ06730 810 aa14.79□□□□□ -0.04
EFNB1-201ENST00000204961 HECTD3Q5T447 861 aa14.79□□□□□ -0.04
EFNB1-201ENST00000204961 ADNP2Q6IQ32 1131 aa14.79□□□□□ -0.04
EFNB1-201ENST00000204961 SUSD1Q6UWL2 747 aa14.79□□□□□ -0.04
EFNB1-201ENST00000204961 C11orf74Q86VG3 221 aa14.79□□□□□ -0.04
EFNB1-201ENST00000204961 NETO1Q8TDF5 533 aa14.79□□□□□ -0.04
EFNB1-201ENST00000204961 SNX19Q92543 992 aa14.79□□□□□ -0.04
EFNB1-201ENST00000204961 GLMNQ92990 594 aa14.79□□□□□ -0.04
EFNB1-201ENST00000204961 SLC47A1Q96FL8 570 aa14.79□□□□□ -0.04
EFNB1-201ENST00000204961 PSKH2Q96QS6 385 aa14.79□□□□□ -0.04
EFNB1-201ENST00000204961 ADGRE3Q9BY15 652 aa14.79□□□□□ -0.04
EFNB1-201ENST00000204961 LRRC3Q9BY71 257 aa14.79□□□□□ -0.04
EFNB1-201ENST00000204961 RMI1Q9H9A7 625 aa14.79□□□□□ -0.04
EFNB1-201ENST00000204961 ARMC1Q9NVT9 282 aa14.79□□□□□ -0.04
EFNB1-201ENST00000204961 LINC00854A0A1B0GVQ3 168 aa14.79□□□□□ -0.04
EFNB1-201ENST00000204961 CAPN15O75808 1086 aa14.79□□□□□ -0.04
EFNB1-201ENST00000204961 RASAL1O95294 804 aa14.79□□□□□ -0.04
EFNB1-201ENST00000204961 RPS17P08708 135 aaKnown RBP14.79□□□□□ -0.04
EFNB1-201ENST00000204961 ALDH3B2P48448 385 aa14.79□□□□□ -0.04
EFNB1-201ENST00000204961 TTPAP49638 278 aa14.79□□□□□ -0.04
EFNB1-201ENST00000204961 BMXP51813 675 aa14.79□□□□□ -0.04
EFNB1-201ENST00000204961 BNIP2Q12982 314 aa14.79□□□□□ -0.04
EFNB1-201ENST00000204961 DSC3Q14574 896 aa14.79□□□□□ -0.04
EFNB1-201ENST00000204961 TCEA2Q15560 299 aa14.79□□□□□ -0.04
EFNB1-201ENST00000204961 OR4F3Q6IEY1 312 aa14.79□□□□□ -0.04
EFNB1-201ENST00000204961 LCN8Q6JVE9 175 aa14.79□□□□□ -0.04
EFNB1-201ENST00000204961 ZCCHC8Q6NZY4 707 aaKnown RBP14.79□□□□□ -0.04
EFNB1-201ENST00000204961 ELMSAN1Q6PJG2 1045 aa14.79□□□□□ -0.04
EFNB1-201ENST00000204961 RBM23Q86U06 439 aaKnown RBP14.79□□□□□ -0.04
EFNB1-201ENST00000204961 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms