RNA–Protein interactions for RNA: ENSMUST00000111816.2

Trim71-201, Transcript of E3 ubiquitin-protein ligase TRIM71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim71, Length 9,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim71-201ENSMUST00000111816 Ephx2P34914 554 aa18.17■□□□□ 0.5
Trim71-201ENSMUST00000111816 Gng8P63078 70 aa18.17■□□□□ 0.5
Trim71-201ENSMUST00000111816 Smim15Q3UTD9 74 aa18.17■□□□□ 0.5
Trim71-201ENSMUST00000111816 Gm906Q3V0M1 1017 aa18.17■□□□□ 0.5
Trim71-201ENSMUST00000111816 Myo19Q5SV80 963 aa18.17■□□□□ 0.5
Trim71-201ENSMUST00000111816 Trpm4Q7TN37 1213 aa18.17■□□□□ 0.5
Trim71-201ENSMUST00000111816 Cpsf7Q8BTV2 471 aaKnown RBP18.17■□□□□ 0.5
Trim71-201ENSMUST00000111816 Gpr61Q8C010 449 aa18.17■□□□□ 0.5
Trim71-201ENSMUST00000111816 Swsap1Q8VCI7 278 aa18.17■□□□□ 0.5
Trim71-201ENSMUST00000111816 Htra2Q9JIY5 458 aa18.17■□□□□ 0.5
Trim71-201ENSMUST00000111816 Cyp2c39P56656 490 aa18.17■□□□□ 0.5
Trim71-201ENSMUST00000111816 VldlrP98156 873 aa18.17■□□□□ 0.5
Trim71-201ENSMUST00000111816 Trp53i11Q4QQM4 189 aa18.17■□□□□ 0.5
Trim71-201ENSMUST00000111816 FcrlbQ5DRQ8 427 aa18.17■□□□□ 0.5
Trim71-201ENSMUST00000111816 Q8BHG2 160 aa18.17■□□□□ 0.5
Trim71-201ENSMUST00000111816 Ptcd2Q8R3K3 381 aaKnown RBP18.17■□□□□ 0.5
Trim71-201ENSMUST00000111816 GmpsQ3THK7 693 aa18.17■□□□□ 0.5
Trim71-201ENSMUST00000111816 Eci3Q78JN3 317 aa18.17■□□□□ 0.5
Trim71-201ENSMUST00000111816 AftphQ80WT5 931 aa18.17■□□□□ 0.5
Trim71-201ENSMUST00000111816 Impg1Q8R1W8 798 aa18.17■□□□□ 0.5
Trim71-201ENSMUST00000111816 Mat2bQ99LB6 334 aa18.17■□□□□ 0.5
Trim71-201ENSMUST00000111816 Gng13Q9JMF3 67 aa18.17■□□□□ 0.5
Trim71-201ENSMUST00000111816 Wscd2D4PHA7 571 aa18.17■□□□□ 0.5
Trim71-201ENSMUST00000111816 Dph1Q5NCQ5 438 aa18.17■□□□□ 0.5
Trim71-201ENSMUST00000111816 TdrpQ8C5P7 182 aa18.17■□□□□ 0.5
Trim71-201ENSMUST00000111816 Phox2bO35690 314 aa18.17■□□□□ 0.5
Trim71-201ENSMUST00000111816 Gm8773Q3UQ24 132 aa18.17■□□□□ 0.5
Trim71-201ENSMUST00000111816 Fbxo21Q8VDH1 627 aa18.17■□□□□ 0.5
Trim71-201ENSMUST00000111816 Olfr689Q8VG18 320 aa18.17■□□□□ 0.5
Trim71-201ENSMUST00000111816 Acad8Q9D7B6 413 aa18.17■□□□□ 0.5
Trim71-201ENSMUST00000111816 Fam217bA2AJW5 387 aa18.17■□□□□ 0.5
Trim71-201ENSMUST00000111816 Cxcr3O88410 367 aa18.17■□□□□ 0.5
Trim71-201ENSMUST00000111816 Hoxa10P31310 416 aa18.17■□□□□ 0.5
Trim71-201ENSMUST00000111816 UrodP70697 367 aa18.17■□□□□ 0.5
Trim71-201ENSMUST00000111816 Muc1Q02496 630 aa18.17■□□□□ 0.5
Trim71-201ENSMUST00000111816 Cdc14aQ6GQT0 603 aa18.17■□□□□ 0.5
Trim71-201ENSMUST00000111816 Uhrf2Q7TMI3 803 aa18.17■□□□□ 0.5
Trim71-201ENSMUST00000111816 Imp4Q8VHZ7 291 aaKnown RBP18.17■□□□□ 0.5
Trim71-201ENSMUST00000111816 Necab3Q9D6J4 353 aa18.17■□□□□ 0.5
Trim71-201ENSMUST00000111816 Fabp1P12710 127 aa18.17■□□□□ 0.5
Trim71-201ENSMUST00000111816 Lpar1P61793 364 aa18.17■□□□□ 0.5
Trim71-201ENSMUST00000111816 Bpifa6Q0VGU8 367 aa18.17■□□□□ 0.5
Trim71-201ENSMUST00000111816 Ccdc115Q8VE99 180 aaKnown RBP18.17■□□□□ 0.5
Trim71-201ENSMUST00000111816 Actl6bQ99MR0 426 aa18.17■□□□□ 0.5
Trim71-201ENSMUST00000111816 MsraQ9D6Y7 233 aa18.17■□□□□ 0.5
Trim71-201ENSMUST00000111816 Praf2Q9JIG8 178 aa18.17■□□□□ 0.5
Trim71-201ENSMUST00000111816 Clec4aQ9QZ15 238 aa18.17■□□□□ 0.5
Trim71-201ENSMUST00000111816 Glud1P26443 558 aaKnown RBP18.16■□□□□ 0.5
Trim71-201ENSMUST00000111816 Epha3P29319 983 aa18.16■□□□□ 0.5
Trim71-201ENSMUST00000111816 KcnrgQ2TUM3 264 aa18.16■□□□□ 0.5
Trim71-201ENSMUST00000111816 Fbxl8Q8CIG9 374 aa18.16■□□□□ 0.5
Trim71-201ENSMUST00000111816 Acad10Q8K370 1069 aa18.16■□□□□ 0.5
Trim71-201ENSMUST00000111816 Arl6ip5Q8R5J9 188 aa18.16■□□□□ 0.5
Trim71-201ENSMUST00000111816 Slc22a19Q8VCA0 551 aa18.16■□□□□ 0.5
Trim71-201ENSMUST00000111816 Itm2cQ91VK4 269 aa18.16■□□□□ 0.5
Trim71-201ENSMUST00000111816 Snapc2Q91XA5 359 aa18.16■□□□□ 0.5
Trim71-201ENSMUST00000111816 Vta1Q9CR26 309 aa18.16■□□□□ 0.5
Trim71-201ENSMUST00000111816 Fam90a1bQ9D4F3 419 aa18.16■□□□□ 0.5
Trim71-201ENSMUST00000111816 Gys1Q9Z1E4 738 aaKnown RBP18.16■□□□□ 0.5
Trim71-201ENSMUST00000111816 Garem1Q3UFT3 876 aa18.16■□□□□ 0.5
Trim71-201ENSMUST00000111816 Zfp872Q3UVL3 465 aa18.16■□□□□ 0.5
Trim71-201ENSMUST00000111816 Grm4Q68EF4 912 aa18.16■□□□□ 0.5
Trim71-201ENSMUST00000111816 Kctd5Q8VC57 234 aa18.16■□□□□ 0.5
Trim71-201ENSMUST00000111816 Krcc1Q99JT5 256 aa18.16■□□□□ 0.5
Trim71-201ENSMUST00000111816 Olfr221B2RVX8 311 aa18.16■□□□□ 0.5
Trim71-201ENSMUST00000111816 Serpina3jD3Z451 420 aa18.16■□□□□ 0.5
Trim71-201ENSMUST00000111816 Hsf1P38532 525 aa18.16■□□□□ 0.5
Trim71-201ENSMUST00000111816 Clec3bP43025 202 aa18.16■□□□□ 0.5
Trim71-201ENSMUST00000111816 Stt3bQ3TDQ1 823 aa18.16■□□□□ 0.5
Trim71-201ENSMUST00000111816 Abcd2Q61285 741 aa18.16■□□□□ 0.5
Trim71-201ENSMUST00000111816 Inppl1Q6P549 1257 aa18.16■□□□□ 0.5
Trim71-201ENSMUST00000111816 Copz2Q9JHH9 205 aa18.16■□□□□ 0.5
Trim71-201ENSMUST00000111816 1700057G04RikQ3V0U0 232 aa18.16■□□□□ 0.5
Trim71-201ENSMUST00000111816 Znf821Q6PD05 413 aa18.16■□□□□ 0.5
Trim71-201ENSMUST00000111816 Slc25a36Q922G0 311 aa18.16■□□□□ 0.5
Trim71-201ENSMUST00000111816 Fam3bQ9D309 235 aa18.16■□□□□ 0.5
Trim71-201ENSMUST00000111816 Cd63P41731 238 aa18.16■□□□□ 0.5
Trim71-201ENSMUST00000111816 Taf1cQ6PDZ2 836 aa18.16■□□□□ 0.5
Trim71-201ENSMUST00000111816 Med16Q6PGF3 828 aa18.16■□□□□ 0.5
Trim71-201ENSMUST00000111816 Rad9bQ6WBX7 403 aa18.16■□□□□ 0.5
Trim71-201ENSMUST00000111816 Cdkl3Q8BLF2 595 aa18.16■□□□□ 0.5
Trim71-201ENSMUST00000111816 Pop1Q8K205 1045 aa18.16■□□□□ 0.5
Trim71-201ENSMUST00000111816 Kcnip3Q9QXT8 256 aa18.16■□□□□ 0.5
Trim71-201ENSMUST00000111816 Emilin3P59900 758 aa18.16■□□□□ 0.5
Trim71-201ENSMUST00000111816 Tle3Q08122 772 aaKnown RBP18.16■□□□□ 0.5
Trim71-201ENSMUST00000111816 Csgalnact1Q8BJQ9 530 aa18.16■□□□□ 0.5
Trim71-201ENSMUST00000111816 Robo4Q8C310 1012 aa18.16■□□□□ 0.5
Trim71-201ENSMUST00000111816 Mettl1Q9Z120 268 aa18.16■□□□□ 0.5
Trim71-201ENSMUST00000111816 Olfr239A0PK55 315 aa18.16■□□□□ 0.5
Trim71-201ENSMUST00000111816 Olfr55K7N6Q1 315 aa18.16■□□□□ 0.5
Trim71-201ENSMUST00000111816 CatP24270 527 aa18.16■□□□□ 0.5
Trim71-201ENSMUST00000111816 Ap5b1Q3TAP4 876 aa18.16■□□□□ 0.5
Trim71-201ENSMUST00000111816 Trcg1Q58Y74 825 aa18.16■□□□□ 0.5
Trim71-201ENSMUST00000111816 Olfr1474Q7TQQ8 314 aa18.16■□□□□ 0.5
Trim71-201ENSMUST00000111816 Olfr1472Q7TQQ9 314 aa18.16■□□□□ 0.5
Trim71-201ENSMUST00000111816 Cdca5Q9CPY3 264 aa18.16■□□□□ 0.5
Trim71-201ENSMUST00000111816 Armc1Q9D7A8 282 aa18.16■□□□□ 0.5
Trim71-201ENSMUST00000111816 Fabp12Q9DAK4 132 aa18.16■□□□□ 0.5
Trim71-201ENSMUST00000111816 Rdh11Q9QYF1 316 aa18.16■□□□□ 0.5
Trim71-201ENSMUST00000111816 PrlP06879 226 aa18.15■□□□□ 0.5
Retrieved 100 of 22,080 RNA–protein pairs in 30.6 ms