RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Dcun1d5Q9CXV9 237 aa16.37■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Nxpe2Q3U095 558 aa16.37■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Gprc5aQ8BHL4 356 aa16.37■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Fam92aQ8BP22 355 aa16.37■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Nt5dc1Q8C5P5 467 aa16.37■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 AcppQ8CE08 381 aa16.37■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 HyiQ8R1F5 277 aa16.37■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Snapc5Q8R2K7 98 aa16.37■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Ints14Q8R3P6 515 aa16.37■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Olfr345Q8VGK4 311 aa16.37■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Clec4aQ9QZ15 238 aa16.37■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Gm16434J3QN10 205 aa16.37■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Olfr603L7N1Y4 312 aa16.37■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 4930555G01RikL7N253 205 aa16.37■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Gja3Q64448 417 aa16.37■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 PdgfcQ8CI19 345 aa16.37■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Itgb3bpQ9CQ82 176 aa16.37■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Tchhl1Q9D3P1 638 aa16.37■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Bpifa3Q9D9J8 232 aa16.37■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Fgf1P61148 155 aa16.37■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Rasgrp3Q6NZH9 691 aa16.37■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Oog2Q7TPX8 476 aa16.37■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Ogfrl1Q8VE52 464 aa16.37■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Olfr1502Q8VG66 316 aa16.37■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Otub2Q9CQX0 234 aa16.37■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 PigkQ9CXY9 395 aa16.37■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Slc19a2Q9EQN9 498 aa16.37■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Bin3Q9JI08 253 aa16.37■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Gm14459A2BI73 179 aa16.37■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Vmn2r49D3Z6L3 852 aa16.37■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Calhm3J3QMI4 347 aa16.37■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Vmn2r32K7N686 852 aa16.37■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Gpr158Q8C419 1200 aa16.37■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 RadxQ8C779 850 aa16.37■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Tmem259Q8CIV2 574 aa16.37■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Ugt3a2Q8JZZ0 523 aa16.37■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Prkd3Q8K1Y2 889 aa16.37■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 AuhQ9JLZ3 314 aa16.37■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Wnt3aP27467 352 aa16.37■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Zfp957Q3UT76 567 aa16.37■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Sat2Q6P8J2 170 aa16.37■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Ogfod2Q9CQ04 349 aa16.37■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Zfp384E9Q1A5 584 aaKnown RBP16.37■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 SmgcF6VRN1 385 aa16.37■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Mid1O70583 680 aa16.37■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Gh1P06880 216 aa16.37■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 MaptP10637 733 aa16.37■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 TgfbiP82198 683 aa16.37■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Gabra5Q8BHJ7 463 aa16.37■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Havcr2Q8VIM0 281 aa16.37■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 PglsQ9CQ60 257 aa16.37■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Tmem9Q9CR23 183 aa16.37■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Lrrc69Q9D9Q0 347 aa16.37■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Gm7682A0A0J9YUM1 481 aa16.36■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Gm2035J3QP87 144 aa16.36■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Vmn2r93L7N1Z9 857 aa16.36■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Nr5a2P45448 560 aa16.36■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Dsg4Q7TMD7 1041 aa16.36■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Olfr684Q7TRN8 312 aa16.36■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 LipmQ8K2A6 422 aa16.36■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Olfr1176Q8VG40 315 aa16.36■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Psma1Q9R1P4 263 aa16.36■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Vmn1r3A2AMT7 306 aa16.36■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Pold1P52431 1105 aa16.36■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Papss1Q60967 624 aa16.36■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Snta1Q61234 503 aa16.36■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Vmn1r79Q8R285 306 aa16.36■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Q9D2Q3 444 aa16.36■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Clk4O35493 481 aa16.36■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Mapk14P47811 360 aa16.36■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Slc22a16Q497L8 649 aa16.36■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Stfa2l1Q8BWM3 103 aa16.36■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Cyp2j9Q924D1 502 aa16.36■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Olfr239A0PK55 315 aa16.36■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Rnf169E9Q7F2 694 aa16.36■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Olfr55K7N6Q1 315 aa16.36■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 CamkmtQ3U2J5 323 aa16.36■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Mapk10Q61831 464 aa16.36■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Spin4Q8K1L2 249 aa16.36■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Ptbp2Q91Z31 531 aaKnown RBP16.36■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Cldn9Q9Z0S7 217 aa16.36■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Vmn2r19G5E8G4 854 aa16.36■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Npr3P70180 536 aa16.36■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 R3hdm4Q4VBF2 262 aa16.36■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Osgepl1Q6PEB4 414 aa16.36■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Pacsin3Q99JB8 424 aa16.36■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Vmn2r125D3Z3M1 369 aa16.36■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Zfp809G3X9G7 402 aa16.36■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Pitpnm1O35954 1243 aa16.36■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Dcst1Q059Y8 732 aa16.36■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Cep76Q0VEJ0 659 aa16.36■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Fut11Q8BHC9 489 aa16.36■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 TpbglQ8C013 384 aa16.36■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Olfr809Q8VEX8 328 aa16.36■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Cacna1bO55017 2327 aa16.36■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Gm10037E9PX85 104 aa16.36■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Vmn2r57L7N269 863 aa16.36■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Tspan5P62080 268 aa16.36■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Sdhaf3Q8BQU3 125 aa16.36■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Tmem72Q8C3K5 275 aa16.36■□□□□ 0.21
Retrieved 100 of 22,080 RNA–protein pairs in 55.8 ms