RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 L3hypdhQ9CXA2 354 aa18.43■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Zfp773Q9CZ29 471 aa18.43■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Q9D1K7 174 aaKnown RBP18.43■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 TrmuQ9DAT5 417 aa18.43■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Prl5a1Q9JII2 230 aa18.43■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Fads3Q9JJE7 449 aa18.43■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Gm3752A6NAT4 150 aa18.42■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 P01644 108 aa18.42■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 P01645 108 aa18.42■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 P01646 108 aa18.42■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 P01647 108 aa18.42■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 SrgnP13609 152 aa18.42■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Rab8aP55258 207 aa18.42■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Cyp2c65Q148B1 490 aa18.42■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 SynaQ5G5D5 617 aa18.42■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Ppp1r14bQ62084 147 aa18.42■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 LdahQ8BVA5 326 aa18.42■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 BroxQ8K2Q7 411 aa18.42■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Vmn1r18Q8R2C8 299 aa18.42■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Chid1Q922Q9 393 aa18.42■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Atp6v1c2Q99L60 427 aa18.42■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Ints11Q9CWS4 600 aa18.42■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Hs6st1Q9QYK5 411 aa18.42■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Bcl10Q9Z0H7 233 aa18.42■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Stau1Q9Z108 487 aaKnown RBP18.42■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Gm30302A0A1Y7VN40 1110 aa18.42■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Gbp4A4UUI3 631 aa18.42■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Zfp992B1ASD8 573 aa18.42■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Cdh18E9Q9Q6 790 aa18.42■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Stx7O70439 261 aa18.42■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Orm2P07361 207 aa18.42■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Fth1P09528 182 aa18.42■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Hspa1bP17879 642 aaKnown RBP18.42■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Kcnj13P86046 360 aa18.42■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Krt80Q0VBK2 452 aa18.42■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Ccdc85aQ5SP85 500 aa18.42■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Pcdhga7Q6DD96 935 aa18.42■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Krt72Q6IME9 520 aa18.42■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 PdprQ7TSQ8 878 aa18.42■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Pxylp1Q8BHA9 480 aa18.42■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Q8BHR8 331 aa18.42■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Zfp991Q8R1N3 573 aa18.42■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Cadm1Q8R5M8 456 aaKnown RBP18.42■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Olfr1310Q8VF85 312 aa18.42■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Olfr352Q8VGJ9 315 aa18.42■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 TrabdQ99JY4 376 aa18.42■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 PudpQ9D5U5 234 aa18.42■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Tas2r119Q9JKT2 335 aa18.42■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Fhl5Q9WTX7 284 aa18.42■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Ep400Q8CHI8 3072 aaKnown RBP18.42■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Olfr1480A0A140LIR8 359 aa18.41■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 TriqkB2B9E1 86 aa18.41■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Vmn2r90E9PXJ8 863 aa18.41■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Vmn1r238E9Q373 306 aa18.41■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Ctnnd2O35927 1247 aa18.41■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Nfkb1P25799 971 aa18.41■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Nfatc3P97305 1075 aa18.41■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Smim24Q0VG18 120 aa18.41■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Tmc5Q32NZ6 967 aa18.41■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Ankrd27Q3UMR0 1048 aa18.41■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Osbp2Q5QNQ6 908 aa18.41■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Rnf215Q5SPX3 379 aa18.41■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Susd6Q8BGE4 302 aa18.41■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Ikzf5Q8BU00 419 aa18.41■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Dcaf12l1Q8CBW4 501 aa18.41■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Txndc11Q8K2W3 948 aa18.41■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Ccdc59Q8R2N0 240 aaKnown RBP18.41■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Micu1Q8VCX5 477 aa18.41■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Fig4Q91WF7 907 aa18.41■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Pcdhb19Q91Y01 801 aa18.41■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Efhc2Q9D485 750 aa18.41■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Exoc2Q9D4H1 924 aa18.41■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Efhd2Q9D8Y0 240 aaKnown RBP18.41■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Rpl38Q9JJI8 70 aaKnown RBP18.41■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Wdr54Q9R0D8 334 aa18.41■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Gbf1Q6DFZ1 1861 aa18.41■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Dlgap4B1AZP2 992 aa18.41■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Catsperg2C6KI89 1145 aa18.41■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Olfr237-ps1K9J725 310 aa18.41■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Gtf2h4O70422 463 aaKnown RBP18.41■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 GzmcP08882 248 aa18.41■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Pcmt1P23506 227 aa18.41■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Faf1P54731 649 aa18.41■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Irf7P70434 457 aa18.41■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 ErgP81270 486 aa18.41■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Gpr149Q3UVY1 732 aa18.41■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Q3V0E1 1183 aa18.41■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Gngt2Q61017 69 aa18.41■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Gpr19Q61121 415 aa18.41■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Rbl1Q64701 1063 aa18.41■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Ppp1r26Q6A025 1163 aa18.41■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Olfr664Q7TRP5 306 aa18.41■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Mettl3Q8C3P7 580 aa18.41■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Gykl1Q8C635 549 aa18.41■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Nlrp10Q8CCN1 673 aa18.41■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Ist1Q9CX00 362 aa18.41■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 CtszQ9WUU7 306 aa18.41■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Btbd35f16A0A087WSN2 498 aa18.4■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Gm10406A6NAS4 205 aa18.4■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Gm3373A6NAS7 205 aa18.4■□□□□ 0.54
Retrieved 100 of 22,080 RNA–protein pairs in 34.3 ms