RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Snx20Q9D2Y5 313 aa9.04□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Clec4aQ9QZ15 238 aa9.04□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Ilf3Q9Z1X4 898 aaKnown RBP9.04□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 A0A286YDU1 74 aa9.04□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 GabreA2AMW3 916 aa9.04□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Gm8020F6WLE9 229 aa9.04□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Gosr2O35166 212 aa9.04□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Ltb4rO88855 351 aa9.04□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Cyp2b9P12790 491 aa9.04□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Gna12P27600 379 aa9.04□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Ckmt1P30275 418 aaKnown RBP9.04□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 FauP35545 74 aaKnown RBP9.04□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 UqcrhP99028 89 aa9.04□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Arhgap20Q6IFT4 1182 aa9.04□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Znf366Q6NS86 746 aa9.04□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Osgepl1Q6PEB4 414 aa9.04□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Thnsl2Q80W22 483 aa9.04□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Spag1Q80ZX8 901 aa9.04□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Kctd15Q8K0E1 283 aa9.04□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 SelenomQ8VHC3 145 aa9.04□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Caskin2Q8VHK1 1201 aa9.04□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Marc2Q922Q1 338 aa9.04□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Rcbtb2Q99LJ7 551 aa9.04□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Col25a1Q99MQ5 666 aa9.04□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Gm16286Q9CQX6 220 aa9.04□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Nkiras2Q9CR56 191 aa9.04□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Smok1Q9QYZ4 484 aa9.04□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Htatip2Q9Z2G9 242 aa9.04□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Gm14692A2BH01 229 aa9.04□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Gm3099J3QPA5 205 aa9.04□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Hsd17b10O08756 261 aaKnown RBP9.04□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 TtkP35761 856 aa9.04□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 ItgavP43406 1044 aa9.04□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 SqleP52019 572 aa9.04□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Arf5P84084 180 aaKnown RBP9.04□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Sox10Q04888 466 aa9.04□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Cep76Q0VEJ0 659 aa9.04□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Prkg2Q61410 762 aa9.04□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Galnt10Q6P9S7 603 aa9.04□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 EnkurQ6SP97 255 aa9.04□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Olfr735Q7TRM4 354 aa9.04□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 AasdhQ80WC9 1100 aa9.04□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Psmd11Q8BG32 422 aa9.04□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Echs1Q8BH95 290 aaKnown RBP9.04□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Olfml2aQ8BHP7 681 aa9.04□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Tdp1Q8BJ37 609 aa9.04□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 MaelQ8BVN9 434 aa9.04□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Bbs4Q8C1Z7 520 aa9.04□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Fam25cQ8CF02 89 aa9.04□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Rasgef1bQ8JZL7 473 aa9.04□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Capn8Q91VA3 703 aa9.04□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Sdcbp2Q99JZ0 292 aa9.04□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Nufip1Q9QXX8 484 aa9.04□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Abca6Q8K441 1624 aa9.04□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Olfr456B2RT27 312 aa9.04□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 En2P09066 324 aa9.04□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Nr2f6P43136 390 aa9.04□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Arf4P61750 180 aa9.04□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Btg1-ps1Q3V0S2 161 aa9.04□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Btg1-ps2Q3V0X0 161 aa9.04□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Tmem65Q4VAE3 234 aa9.04□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Lin54Q571G4 749 aa9.04□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Gm11487Q5RIS0 354 aa9.04□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Adam6bQ6IMH7 756 aa9.04□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 C6.1alQ7M757 291 aa9.04□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Olfr1477Q7TQQ7 315 aa9.04□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Cxcr1Q810W6 351 aa9.04□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Fbxl8Q8CIG9 374 aa9.04□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Hid1Q8R1F6 788 aa9.04□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Olfr458Q8VF80 313 aa9.04□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Olfr183Q8VFB9 309 aa9.04□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Olfr457Q8VGP5 313 aa9.04□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Mrgpra1Q91WW5 304 aa9.04□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Cyp3a41aQ9JMA7 504 aa9.04□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Epb41l4bQ9JMC8 527 aa9.04□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 DnmbpQ6TXD4 1580 aa9.03□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Skint1A7TZE6 364 aa9.03□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Vmn2r11E9Q4X4 861 aa9.03□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Rnf169E9Q7F2 694 aa9.03□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 FaimlJ3QPY3 178 aa9.03□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Vmn2r42O35192 852 aa9.03□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Mid1O70583 680 aa9.03□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Camk2bP28652 542 aa9.03□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Stfa3P35173 103 aa9.03□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Kcnj12P52187 427 aa9.03□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Cpt2P52825 658 aaKnown RBP9.03□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Pecam1Q08481 727 aaKnown RBP9.03□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Gm732Q3V0P9 516 aa9.03□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 HecaQ3V1N5 544 aaKnown RBP9.03□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Pacs2Q3V3Q7 862 aa9.03□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Uimc1Q5U5Q9 727 aa9.03□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Lrrn1Q61809 716 aa9.03□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Abhd10Q6PE15 297 aa9.03□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Olfr1313Q7TQW8 311 aa9.03□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Gabra5Q8BHJ7 463 aa9.03□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Frmd6Q8C0V9 622 aa9.03□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Dennd1aQ8K382 1016 aa9.03□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Prokr2Q8K458 381 aa9.03□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Q91Z58 1206 aa9.03□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Lrch4Q921G6 680 aa9.03□□□□□ -0.96
Retrieved 100 of 22,080 RNA–protein pairs in 23.4 ms