RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 FCGR1AP12314 374 aa13.8□□□□□ -0.2
CACNA1A-228ENST00000636610 OR1D2P34982 312 aa13.8□□□□□ -0.2
CACNA1A-228ENST00000636610 TTPAP49638 278 aa13.8□□□□□ -0.2
CACNA1A-228ENST00000636610 BMXP51813 675 aa13.8□□□□□ -0.2
CACNA1A-228ENST00000636610 C21orf59P57076 290 aa13.8□□□□□ -0.2
CACNA1A-228ENST00000636610 DSC1Q08554 894 aa13.8□□□□□ -0.2
CACNA1A-228ENST00000636610 DGCR6Q14129 220 aa13.8□□□□□ -0.2
CACNA1A-228ENST00000636610 FAM98BQ52LJ0 330 aaKnown RBP13.8□□□□□ -0.2
CACNA1A-228ENST00000636610 TMEM179BQ7Z7N9 219 aa13.8□□□□□ -0.2
CACNA1A-228ENST00000636610 GALNT7Q86SF2 657 aa13.8□□□□□ -0.2
CACNA1A-228ENST00000636610 ADGRG2Q8IZP9 1017 aa13.8□□□□□ -0.2
CACNA1A-228ENST00000636610 CNIH3Q8TBE1 160 aa13.8□□□□□ -0.2
CACNA1A-228ENST00000636610 PNPT1Q8TCS8 783 aaKnown RBP13.8□□□□□ -0.2
CACNA1A-228ENST00000636610 OSCP1Q8WVF1 389 aa13.8□□□□□ -0.2
CACNA1A-228ENST00000636610 FUBP3Q96I24 572 aaKnown RBP eCLIP13.8□□□□□ -0.2
CACNA1A-228ENST00000636610 HPS4Q9NQG7 708 aa13.8□□□□□ -0.2
CACNA1A-228ENST00000636610 UPK1AO00322 258 aa13.79□□□□□ -0.2
CACNA1A-228ENST00000636610 LSM1O15116 133 aaKnown RBP13.79□□□□□ -0.2
CACNA1A-228ENST00000636610 ADAMTS4O75173 837 aa13.79□□□□□ -0.2
CACNA1A-228ENST00000636610 DEAF1O75398 565 aaPredicted RBP13.79□□□□□ -0.2
CACNA1A-228ENST00000636610 CAPN15O75808 1086 aa13.79□□□□□ -0.2
CACNA1A-228ENST00000636610 PRAMEF1O95521 474 aa13.79□□□□□ -0.2
CACNA1A-228ENST00000636610 EPOP01588 193 aa13.79□□□□□ -0.2
CACNA1A-228ENST00000636610 ANXA6P08133 673 aa13.79□□□□□ -0.2
CACNA1A-228ENST00000636610 ENO2P09104 434 aaPredicted RBP13.79□□□□□ -0.2
CACNA1A-228ENST00000636610 MAPKAPK2P49137 400 aa13.79□□□□□ -0.2
CACNA1A-228ENST00000636610 SLC11A2P49281 568 aa13.79□□□□□ -0.2
CACNA1A-228ENST00000636610 RHOAP61586 193 aa13.79□□□□□ -0.2
CACNA1A-228ENST00000636610 GTF2H3Q13889 308 aa13.79□□□□□ -0.2
CACNA1A-228ENST00000636610 SULT1C3Q6IMI6 304 aa13.79□□□□□ -0.2
CACNA1A-228ENST00000636610 CCDC81Q6ZN84 652 aa13.79□□□□□ -0.2
CACNA1A-228ENST00000636610 DET1Q7L5Y6 550 aa13.79□□□□□ -0.2
CACNA1A-228ENST00000636610 RBM23Q86U06 439 aaKnown RBP13.79□□□□□ -0.2
CACNA1A-228ENST00000636610 SAPCD2Q86UD0 394 aa13.79□□□□□ -0.2
CACNA1A-228ENST00000636610 SLC15A4Q8N697 577 aa13.79□□□□□ -0.2
CACNA1A-228ENST00000636610 PACRGLQ8N7B6 248 aa13.79□□□□□ -0.2
CACNA1A-228ENST00000636610 TBC1D15Q8TC07 691 aa13.79□□□□□ -0.2
CACNA1A-228ENST00000636610 ULK4Q96C45 1275 aa13.79□□□□□ -0.2
CACNA1A-228ENST00000636610 RHNO1Q9BSD3 238 aa13.79□□□□□ -0.2
CACNA1A-228ENST00000636610 TNKS2Q9H2K2 1166 aa13.79□□□□□ -0.2
CACNA1A-228ENST00000636610 ASB8Q9H765 288 aa13.79□□□□□ -0.2
CACNA1A-228ENST00000636610 PTPRDP23468 1912 aa13.79□□□□□ -0.2
CACNA1A-228ENST00000636610 SCN10AQ9Y5Y9 1956 aa13.79□□□□□ -0.2
CACNA1A-228ENST00000636610 SLC38A8A6NNN8 435 aa13.79□□□□□ -0.2
CACNA1A-228ENST00000636610 MYO1GB0I1T2 1018 aa13.79□□□□□ -0.2
CACNA1A-228ENST00000636610 SLC11A1P49279 550 aa13.79□□□□□ -0.2
CACNA1A-228ENST00000636610 ADARB1P78563 741 aaKnown RBP13.79□□□□□ -0.2
CACNA1A-228ENST00000636610 FAM189BP81408 668 aa13.79□□□□□ -0.2
CACNA1A-228ENST00000636610 ARF5P84085 180 aa13.79□□□□□ -0.2
CACNA1A-228ENST00000636610 VAC14Q08AM6 782 aa13.79□□□□□ -0.2
CACNA1A-228ENST00000636610 SF1Q15637 639 aaKnown RBP13.79□□□□□ -0.2
CACNA1A-228ENST00000636610 PGS1Q32NB8 556 aa13.79□□□□□ -0.2
CACNA1A-228ENST00000636610 CCNYL2Q5T2Q4 361 aa13.79□□□□□ -0.2
CACNA1A-228ENST00000636610 SERPINA9Q86WD7 417 aa13.79□□□□□ -0.2
CACNA1A-228ENST00000636610 SLC22A17Q8WUG5 538 aa13.79□□□□□ -0.2
CACNA1A-228ENST00000636610 BRINP2Q9C0B6 783 aa13.79□□□□□ -0.2
CACNA1A-228ENST00000636610 DNMT3LQ9UJW3 386 aa13.79□□□□□ -0.2
CACNA1A-228ENST00000636610 PCDHB3Q9Y5E6 796 aa13.79□□□□□ -0.2
CACNA1A-228ENST00000636610 TET1Q8NFU7 2136 aa13.79□□□□□ -0.2
CACNA1A-228ENST00000636610 SEPT4O43236 478 aa13.78□□□□□ -0.2
CACNA1A-228ENST00000636610 SMAD6O43541 496 aaKnown RBP13.78□□□□□ -0.2
CACNA1A-228ENST00000636610 VPS4BO75351 444 aa13.78□□□□□ -0.2
CACNA1A-228ENST00000636610 CLDN7O95471 211 aa13.78□□□□□ -0.2
CACNA1A-228ENST00000636610 ZNF682O95780 498 aa13.78□□□□□ -0.2
CACNA1A-228ENST00000636610 S100BP04271 92 aaPredicted RBP13.78□□□□□ -0.2
CACNA1A-228ENST00000636610 CASP9P55211 416 aa13.78□□□□□ -0.2
CACNA1A-228ENST00000636610 EEFSECP57772 596 aaKnown RBP13.78□□□□□ -0.2
CACNA1A-228ENST00000636610 KCNAB2Q13303 367 aa13.78□□□□□ -0.2
CACNA1A-228ENST00000636610 PLD1Q13393 1074 aa13.78□□□□□ -0.2
CACNA1A-228ENST00000636610 PERM1Q5SV97 790 aa13.78□□□□□ -0.2
CACNA1A-228ENST00000636610 ANKRD26P1Q6NSI1 321 aa13.78□□□□□ -0.2
CACNA1A-228ENST00000636610 SBSNQ6UWP8 590 aa13.78□□□□□ -0.2
CACNA1A-228ENST00000636610 PTRH1Q86Y79 214 aaKnown RBP13.78□□□□□ -0.2
CACNA1A-228ENST00000636610 IFNL1Q8IU54 200 aa13.78□□□□□ -0.2
CACNA1A-228ENST00000636610 DBF4BQ8NFT6 615 aa13.78□□□□□ -0.2
CACNA1A-228ENST00000636610 WFDC5Q8TCV5 224 aa13.78□□□□□ -0.2
CACNA1A-228ENST00000636610 OR52E6Q96RD3 313 aa13.78□□□□□ -0.2
CACNA1A-228ENST00000636610 CSF3RQ99062 836 aa13.78□□□□□ -0.2
CACNA1A-228ENST00000636610 BARD1Q99728 777 aaKnown RBP13.78□□□□□ -0.2
CACNA1A-228ENST00000636610 DPY30Q9C005 99 aa13.78□□□□□ -0.2
CACNA1A-228ENST00000636610 AMBRA1Q9C0C7 1298 aa13.78□□□□□ -0.2
CACNA1A-228ENST00000636610 CLPBQ9H078 707 aa13.78□□□□□ -0.2
CACNA1A-228ENST00000636610 ZNF490Q9ULM2 529 aaPredicted RBP13.78□□□□□ -0.2
CACNA1A-228ENST00000636610 LOC730098B7Z3J9 87 aa13.78□□□□□ -0.2
CACNA1A-228ENST00000636610 FTH1P02794 183 aa13.78□□□□□ -0.2
CACNA1A-228ENST00000636610 ALDH2P05091 517 aa13.78□□□□□ -0.2
CACNA1A-228ENST00000636610 ALPLP05186 524 aa13.78□□□□□ -0.2
CACNA1A-228ENST00000636610 CLCN7P51798 805 aa13.78□□□□□ -0.2
CACNA1A-228ENST00000636610 PHEXP78562 749 aa13.78□□□□□ -0.2
CACNA1A-228ENST00000636610 CD300CQ08708 224 aa13.78□□□□□ -0.2
CACNA1A-228ENST00000636610 NFATC3Q12968 1075 aa13.78□□□□□ -0.2
CACNA1A-228ENST00000636610 DAG1Q14118 895 aa13.78□□□□□ -0.2
CACNA1A-228ENST00000636610 CTU2Q2VPK5 515 aaKnown RBP13.78□□□□□ -0.2
CACNA1A-228ENST00000636610 SUSD1Q6UWL2 747 aa13.78□□□□□ -0.2
CACNA1A-228ENST00000636610 SLC13A3Q8WWT9 602 aa13.78□□□□□ -0.2
CACNA1A-228ENST00000636610 ACDQ96AP0 544 aa13.78□□□□□ -0.2
CACNA1A-228ENST00000636610 EGLN2Q96KS0 407 aa13.78□□□□□ -0.2
CACNA1A-228ENST00000636610 BEGAINQ9BUH8 593 aa13.78□□□□□ -0.2
CACNA1A-228ENST00000636610 MAGEH1Q9H213 219 aa13.78□□□□□ -0.2
CACNA1A-228ENST00000636610 ACTR8Q9H981 624 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms