RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 LEPRP48357 1165 aaKnown RBP16.32■□□□□ 0.2
CBWD3-211ENST00000615061 MAPK10P53779 464 aa16.32■□□□□ 0.2
CBWD3-211ENST00000615061 PLCL1Q15111 1095 aa16.32■□□□□ 0.2
CBWD3-211ENST00000615061 ZNF789Q5FWF6 425 aa16.32■□□□□ 0.2
CBWD3-211ENST00000615061 SYDE1Q6ZW31 735 aaPredicted RBP16.32■□□□□ 0.2
CBWD3-211ENST00000615061 HOOK3Q86VS8 718 aa16.32■□□□□ 0.2
CBWD3-211ENST00000615061 UNC5BQ8IZJ1 945 aa16.32■□□□□ 0.2
CBWD3-211ENST00000615061 PHC3Q8NDX5 983 aa16.32■□□□□ 0.2
CBWD3-211ENST00000615061 TGM7Q96PF1 710 aa16.32■□□□□ 0.2
CBWD3-211ENST00000615061 P2RY12Q9H244 342 aa16.32■□□□□ 0.2
CBWD3-211ENST00000615061 SNRNP200O75643 2136 aaKnown RBP16.32■□□□□ 0.2
CBWD3-211ENST00000615061 UBA6A0AVT1 1052 aaPredicted RBP16.31■□□□□ 0.2
CBWD3-211ENST00000615061 SLC5A10A0PJK1 596 aa16.31■□□□□ 0.2
CBWD3-211ENST00000615061 MAGEB16A2A368 324 aa16.31■□□□□ 0.2
CBWD3-211ENST00000615061 CDRT15L2A8MXV6 281 aa16.31■□□□□ 0.2
CBWD3-211ENST00000615061 CAPN5O15484 640 aaPredicted RBP16.31■□□□□ 0.2
CBWD3-211ENST00000615061 KIF1CO43896 1103 aaKnown RBP16.31■□□□□ 0.2
CBWD3-211ENST00000615061 NDUFS3O75489 264 aa16.31■□□□□ 0.2
CBWD3-211ENST00000615061 ITGA2BP08514 1039 aa16.31■□□□□ 0.2
CBWD3-211ENST00000615061 PPARGP37231 505 aaPredicted RBP16.31■□□□□ 0.2
CBWD3-211ENST00000615061 ITGA8P53708 1063 aa16.31■□□□□ 0.2
CBWD3-211ENST00000615061 EIF3BP55884 814 aaKnown RBP16.31■□□□□ 0.2
CBWD3-211ENST00000615061 HP1BP3Q5SSJ5 553 aaPredicted RBP16.31■□□□□ 0.2
CBWD3-211ENST00000615061 NEPROQ6NW34 567 aa16.31■□□□□ 0.2
CBWD3-211ENST00000615061 IGF2-ASQ6U949 168 aa16.31■□□□□ 0.2
CBWD3-211ENST00000615061 CENPUQ71F23 418 aa16.31■□□□□ 0.2
CBWD3-211ENST00000615061 ARHGAP22Q7Z5H3 698 aa16.31■□□□□ 0.2
CBWD3-211ENST00000615061 PCGF5Q86SE9 256 aa16.31■□□□□ 0.2
CBWD3-211ENST00000615061 IGDCC3Q8IVU1 814 aa16.31■□□□□ 0.2
CBWD3-211ENST00000615061 PMEPA1Q969W9 287 aa16.31■□□□□ 0.2
CBWD3-211ENST00000615061 NAF1Q96HR8 494 aaKnown RBP16.31■□□□□ 0.2
CBWD3-211ENST00000615061 ZNF578Q96N58 590 aaPredicted RBP16.31■□□□□ 0.2
CBWD3-211ENST00000615061 DPYSL5Q9BPU6 564 aa16.31■□□□□ 0.2
CBWD3-211ENST00000615061 EPB41L1Q9H4G0 881 aa16.31■□□□□ 0.2
CBWD3-211ENST00000615061 THSD1Q9NS62 852 aa16.31■□□□□ 0.2
CBWD3-211ENST00000615061 OCIAD1Q9NX40 245 aa16.31■□□□□ 0.2
CBWD3-211ENST00000615061 SLC24A2Q9UI40 661 aa16.31■□□□□ 0.2
CBWD3-211ENST00000615061 MN1Q10571 1320 aaPredicted RBP16.31■□□□□ 0.2
CBWD3-211ENST00000615061 BHMG1C9JSJ3 638 aaPredicted RBP16.31■□□□□ 0.2
CBWD3-211ENST00000615061 IFRD1O00458 451 aaPredicted RBP16.31■□□□□ 0.2
CBWD3-211ENST00000615061 LIN7AO14910 233 aaPredicted RBP16.31■□□□□ 0.2
CBWD3-211ENST00000615061 HGSO14964 777 aaPredicted RBP16.31■□□□□ 0.2
CBWD3-211ENST00000615061 SEC31AO94979 1220 aaKnown RBP16.31■□□□□ 0.2
CBWD3-211ENST00000615061 FGF3P11487 239 aaPredicted RBP16.31■□□□□ 0.2
CBWD3-211ENST00000615061 PAMP19021 973 aa16.31■□□□□ 0.2
CBWD3-211ENST00000615061 ERVPABLB-1P60509 514 aa16.31■□□□□ 0.2
CBWD3-211ENST00000615061 RPA4Q13156 261 aa16.31■□□□□ 0.2
CBWD3-211ENST00000615061 TRA2AQ13595 282 aaKnown RBP eCLIP16.31■□□□□ 0.2
CBWD3-211ENST00000615061 TYSND1Q2T9J0 566 aa16.31■□□□□ 0.2
CBWD3-211ENST00000615061 BBS9Q3SYG4 887 aa16.31■□□□□ 0.2
CBWD3-211ENST00000615061 CTSL3PQ5NE16 218 aa16.31■□□□□ 0.2
CBWD3-211ENST00000615061 MRNIPQ6NTE8 343 aa16.31■□□□□ 0.2
CBWD3-211ENST00000615061 HIBCHQ6NVY1 386 aaPredicted RBP16.31■□□□□ 0.2
CBWD3-211ENST00000615061 PDZD3Q86UT5 571 aa16.31■□□□□ 0.2
CBWD3-211ENST00000615061 PLXDC1Q8IUK5 500 aa16.31■□□□□ 0.2
CBWD3-211ENST00000615061 VRK3Q8IV63 474 aa16.31■□□□□ 0.2
CBWD3-211ENST00000615061 DENND6AQ8IWF6 608 aa16.31■□□□□ 0.2
CBWD3-211ENST00000615061 SNIP1Q8TAD8 396 aaKnown RBP16.31■□□□□ 0.2
CBWD3-211ENST00000615061 LPGAT1Q92604 370 aa16.31■□□□□ 0.2
CBWD3-211ENST00000615061 TFGQ92734 400 aaPredicted RBP16.31■□□□□ 0.2
CBWD3-211ENST00000615061 STAMBPL1Q96FJ0 436 aa16.31■□□□□ 0.2
CBWD3-211ENST00000615061 BIRC8Q96P09 236 aa16.31■□□□□ 0.2
CBWD3-211ENST00000615061 FERD3LQ96RJ6 166 aa16.31■□□□□ 0.2
CBWD3-211ENST00000615061 KIR3DX1Q9H7L2 352 aa16.31■□□□□ 0.2
CBWD3-211ENST00000615061 CRYL1Q9Y2S2 319 aa16.31■□□□□ 0.2
CBWD3-211ENST00000615061 SNX24Q9Y343 169 aa16.31■□□□□ 0.2
CBWD3-211ENST00000615061 FAM208BQ5VWN6 2430 aa16.3■□□□□ 0.2
CBWD3-211ENST00000615061 EFCAB8A8MWE9 144 aa16.3■□□□□ 0.2
CBWD3-211ENST00000615061 USP1O94782 785 aa16.3■□□□□ 0.2
CBWD3-211ENST00000615061 C9P02748 559 aa16.3■□□□□ 0.2
CBWD3-211ENST00000615061 GSTM1P09488 218 aa16.3■□□□□ 0.2
CBWD3-211ENST00000615061 CSTF2P33240 577 aaKnown RBP eCLIP16.3■□□□□ 0.2
CBWD3-211ENST00000615061 EIF2S3P41091 472 aaKnown RBP16.3■□□□□ 0.2
CBWD3-211ENST00000615061 RPL21P46778 160 aaKnown RBP16.3■□□□□ 0.2
CBWD3-211ENST00000615061 GSTM4Q03013 218 aa16.3■□□□□ 0.2
CBWD3-211ENST00000615061 HSPA14Q0VDF9 509 aa16.3■□□□□ 0.2
CBWD3-211ENST00000615061 PRKG2Q13237 762 aa16.3■□□□□ 0.2
CBWD3-211ENST00000615061 CTBP1Q13363 440 aa16.3■□□□□ 0.2
CBWD3-211ENST00000615061 KRT33BQ14525 404 aa16.3■□□□□ 0.2
CBWD3-211ENST00000615061 MORF4L2Q15014 288 aa16.3■□□□□ 0.2
CBWD3-211ENST00000615061 SYTL3Q4VX76 610 aa16.3■□□□□ 0.2
CBWD3-211ENST00000615061 ARMC3Q5W041 872 aa16.3■□□□□ 0.2
CBWD3-211ENST00000615061 ZNF470Q6ECI4 717 aa16.3■□□□□ 0.2
CBWD3-211ENST00000615061 PTRHD1Q6GMV3 140 aaKnown RBP16.3■□□□□ 0.2
CBWD3-211ENST00000615061 IRGCQ6NXR0 463 aa16.3■□□□□ 0.2
CBWD3-211ENST00000615061 FAM92BQ6ZTR7 304 aa16.3■□□□□ 0.2
CBWD3-211ENST00000615061 CILP2Q8IUL8 1156 aa16.3■□□□□ 0.2
CBWD3-211ENST00000615061 SPNS2Q8IVW8 549 aa16.3■□□□□ 0.2
CBWD3-211ENST00000615061 AGBL5Q8NDL9 886 aa16.3■□□□□ 0.2
CBWD3-211ENST00000615061 FAM136AQ96C01 138 aa16.3■□□□□ 0.2
CBWD3-211ENST00000615061 WDR83Q9BRX9 315 aaKnown RBP16.3■□□□□ 0.2
CBWD3-211ENST00000615061 CDYLQ9Y232 598 aa16.3■□□□□ 0.2
CBWD3-211ENST00000615061 RAD51CO43502 376 aa16.29■□□□□ 0.2
CBWD3-211ENST00000615061 ACADLP28330 430 aa16.29■□□□□ 0.2
CBWD3-211ENST00000615061 FMO4P31512 558 aa16.29■□□□□ 0.2
CBWD3-211ENST00000615061 SLC5A2P31639 672 aa16.29■□□□□ 0.2
CBWD3-211ENST00000615061 SDCCAG8Q86SQ7 713 aaPredicted RBP16.29■□□□□ 0.2
CBWD3-211ENST00000615061 CLEC14AQ86T13 490 aa16.29■□□□□ 0.2
CBWD3-211ENST00000615061 FAM129CQ86XR2 697 aa16.29■□□□□ 0.2
CBWD3-211ENST00000615061 OR5AR1Q8NGP9 310 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms