RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 PNMA8BQ9ULN7 279 aaPredicted RBP13.82□□□□□ -0.2
COL6A1-207ENST00000612273 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.82□□□□□ -0.2
COL6A1-207ENST00000612273 S100BP04271 92 aaPredicted RBP13.82□□□□□ -0.2
COL6A1-207ENST00000612273 PLA2G16P53816 162 aa13.82□□□□□ -0.2
COL6A1-207ENST00000612273 CASP9P55211 416 aa13.82□□□□□ -0.2
COL6A1-207ENST00000612273 EEFSECP57772 596 aaKnown RBP13.82□□□□□ -0.2
COL6A1-207ENST00000612273 ZNF177Q13360 481 aaPredicted RBP13.82□□□□□ -0.2
COL6A1-207ENST00000612273 SPCS2Q15005 226 aa13.82□□□□□ -0.2
COL6A1-207ENST00000612273 TAF12Q16514 161 aa13.82□□□□□ -0.2
COL6A1-207ENST00000612273 BROXQ5VW32 411 aa13.82□□□□□ -0.2
COL6A1-207ENST00000612273 THAP5Q7Z6K1 395 aa13.82□□□□□ -0.2
COL6A1-207ENST00000612273 TMEM179BQ7Z7N9 219 aa13.82□□□□□ -0.2
COL6A1-207ENST00000612273 STON2Q8WXE9 905 aa13.82□□□□□ -0.2
COL6A1-207ENST00000612273 ZNF583Q96ND8 569 aa13.82□□□□□ -0.2
COL6A1-207ENST00000612273 AGRPO00253 132 aa13.82□□□□□ -0.2
COL6A1-207ENST00000612273 KLKB1P03952 638 aa13.82□□□□□ -0.2
COL6A1-207ENST00000612273 FUCA1P04066 466 aa13.82□□□□□ -0.2
COL6A1-207ENST00000612273 MZF1P28698 734 aaPredicted RBP13.82□□□□□ -0.2
COL6A1-207ENST00000612273 HLCSP50747 726 aa13.82□□□□□ -0.2
COL6A1-207ENST00000612273 ADARB1P78563 741 aaKnown RBP13.82□□□□□ -0.2
COL6A1-207ENST00000612273 CD47Q08722 323 aa13.82□□□□□ -0.2
COL6A1-207ENST00000612273 TYSND1Q2T9J0 566 aa13.82□□□□□ -0.2
COL6A1-207ENST00000612273 XKR7Q5GH72 579 aa13.82□□□□□ -0.2
COL6A1-207ENST00000612273 RTP2Q5QGT7 225 aa13.82□□□□□ -0.2
COL6A1-207ENST00000612273 CRTC3Q6UUV7 619 aa13.82□□□□□ -0.2
COL6A1-207ENST00000612273 SLC47A1Q96FL8 570 aa13.82□□□□□ -0.2
COL6A1-207ENST00000612273 OR52E6Q96RD3 313 aa13.82□□□□□ -0.2
COL6A1-207ENST00000612273 TRIB3Q96RU7 358 aa13.82□□□□□ -0.2
COL6A1-207ENST00000612273 AMBRA1Q9C0C7 1298 aa13.82□□□□□ -0.2
COL6A1-207ENST00000612273 CD320Q9NPF0 282 aa13.82□□□□□ -0.2
COL6A1-207ENST00000612273 HPS4Q9NQG7 708 aa13.82□□□□□ -0.2
COL6A1-207ENST00000612273 RASSF1Q9NS23 344 aa13.82□□□□□ -0.2
COL6A1-207ENST00000612273 COQ6Q9Y2Z9 468 aa13.82□□□□□ -0.2
COL6A1-207ENST00000612273 ZNF236Q9UL36 1845 aa13.81□□□□□ -0.2
COL6A1-207ENST00000612273 UPK1AO00322 258 aa13.81□□□□□ -0.2
COL6A1-207ENST00000612273 FFAR2O15552 330 aa13.81□□□□□ -0.2
COL6A1-207ENST00000612273 TBC1D4O60343 1298 aa13.81□□□□□ -0.2
COL6A1-207ENST00000612273 SLC25A14O95258 325 aaPredicted RBP13.81□□□□□ -0.2
COL6A1-207ENST00000612273 ALPLP05186 524 aa13.81□□□□□ -0.2
COL6A1-207ENST00000612273 TYMPP19971 482 aa13.81□□□□□ -0.2
COL6A1-207ENST00000612273 CCND3P30281 292 aaPredicted RBP13.81□□□□□ -0.2
COL6A1-207ENST00000612273 FLT3LGP49771 235 aa13.81□□□□□ -0.2
COL6A1-207ENST00000612273 ALDH3A2P51648 485 aa13.81□□□□□ -0.2
COL6A1-207ENST00000612273 SUOXP51687 545 aa13.81□□□□□ -0.2
COL6A1-207ENST00000612273 YBEYP58557 167 aaPredicted RBP13.81□□□□□ -0.2
COL6A1-207ENST00000612273 ACVR1Q04771 509 aa13.81□□□□□ -0.2
COL6A1-207ENST00000612273 MGAT3Q09327 533 aa13.81□□□□□ -0.2
COL6A1-207ENST00000612273 CTU2Q2VPK5 515 aaKnown RBP13.81□□□□□ -0.2
COL6A1-207ENST00000612273 BEND5Q7L4P6 421 aa13.81□□□□□ -0.2
COL6A1-207ENST00000612273 SLC13A3Q8WWT9 602 aa13.81□□□□□ -0.2
COL6A1-207ENST00000612273 BARD1Q99728 777 aaKnown RBP13.81□□□□□ -0.2
COL6A1-207ENST00000612273 RIBC2Q9H4K1 309 aa13.81□□□□□ -0.2
COL6A1-207ENST00000612273 PTBP2Q9UKA9 531 aaKnown RBP13.81□□□□□ -0.2
COL6A1-207ENST00000612273 BAG5Q9UL15 447 aa13.81□□□□□ -0.2
COL6A1-207ENST00000612273 C5orf42Q9H799 3197 aa13.81□□□□□ -0.2
COL6A1-207ENST00000612273 IGLV3-10A0A075B6K4 115 aa13.81□□□□□ -0.2
COL6A1-207ENST00000612273 MTMR11A4FU01 709 aa13.81□□□□□ -0.2
COL6A1-207ENST00000612273 OR7A17O14581 309 aa13.81□□□□□ -0.2
COL6A1-207ENST00000612273 ACSL4O60488 711 aa13.81□□□□□ -0.2
COL6A1-207ENST00000612273 VPS4BO75351 444 aa13.81□□□□□ -0.2
COL6A1-207ENST00000612273 RAP2AP10114 183 aa13.81□□□□□ -0.2
COL6A1-207ENST00000612273 CDH1P12830 882 aa13.81□□□□□ -0.2
COL6A1-207ENST00000612273 MAGP20916 626 aa13.81□□□□□ -0.2
COL6A1-207ENST00000612273 CORO1AP31146 461 aaKnown RBP13.81□□□□□ -0.2
COL6A1-207ENST00000612273 MAP2K4P45985 399 aa13.81□□□□□ -0.2
COL6A1-207ENST00000612273 TTPAP49638 278 aa13.81□□□□□ -0.2
COL6A1-207ENST00000612273 TAF1AQ15573 450 aaPredicted RBP13.81□□□□□ -0.2
COL6A1-207ENST00000612273 CRY1Q16526 586 aa13.81□□□□□ -0.2
COL6A1-207ENST00000612273 FAM117BQ6P1L5 589 aa13.81□□□□□ -0.2
COL6A1-207ENST00000612273 GPR150Q8NGU9 434 aa13.81□□□□□ -0.2
COL6A1-207ENST00000612273 EID2BQ96D98 161 aa13.81□□□□□ -0.2
COL6A1-207ENST00000612273 PSKH2Q96QS6 385 aa13.81□□□□□ -0.2
COL6A1-207ENST00000612273 ZBTB18Q99592 522 aa13.81□□□□□ -0.2
COL6A1-207ENST00000612273 FEM1AQ9BSK4 669 aa13.81□□□□□ -0.2
COL6A1-207ENST00000612273 ASB8Q9H765 288 aa13.81□□□□□ -0.2
COL6A1-207ENST00000612273 ZNF490Q9ULM2 529 aaPredicted RBP13.81□□□□□ -0.2
COL6A1-207ENST00000612273 PRSS21Q9Y6M0 314 aa13.81□□□□□ -0.2
COL6A1-207ENST00000612273 MYO7AQ13402 2215 aa13.81□□□□□ -0.2
COL6A1-207ENST00000612273 hCG_2039718K7EN88 272 aa13.81□□□□□ -0.2
COL6A1-207ENST00000612273 PFKLP17858 780 aa13.81□□□□□ -0.2
COL6A1-207ENST00000612273 HTR1EP28566 365 aa13.81□□□□□ -0.2
COL6A1-207ENST00000612273 RXRGP48443 463 aa13.81□□□□□ -0.2
COL6A1-207ENST00000612273 DDX39BQ13838 428 aaKnown RBP13.81□□□□□ -0.2
COL6A1-207ENST00000612273 SF1Q15637 639 aaKnown RBP13.81□□□□□ -0.2
COL6A1-207ENST00000612273 ZNF773Q6PK81 442 aa13.81□□□□□ -0.2
COL6A1-207ENST00000612273 ZNF555Q8NEP9 628 aa13.81□□□□□ -0.2
COL6A1-207ENST00000612273 BORCS5Q969J3 196 aa13.81□□□□□ -0.2
COL6A1-207ENST00000612273 UBE2FQ969M7 185 aa13.81□□□□□ -0.2
COL6A1-207ENST00000612273 EGLN2Q96KS0 407 aa13.81□□□□□ -0.2
COL6A1-207ENST00000612273 FUNDC2Q9BWH2 189 aa13.81□□□□□ -0.2
COL6A1-207ENST00000612273 CLPBQ9H078 707 aa13.81□□□□□ -0.2
COL6A1-207ENST00000612273 AMBNQ9NP70 447 aa13.81□□□□□ -0.2
COL6A1-207ENST00000612273 POLE4Q9NR33 117 aa13.81□□□□□ -0.2
COL6A1-207ENST00000612273 FAM118AQ9NWS6 357 aa13.81□□□□□ -0.2
COL6A1-207ENST00000612273 MAGEL2Q9UJ55 1249 aa13.81□□□□□ -0.2
COL6A1-207ENST00000612273 LOC730098B7Z3J9 87 aa13.8□□□□□ -0.2
COL6A1-207ENST00000612273 LSM1O15116 133 aaKnown RBP13.8□□□□□ -0.2
COL6A1-207ENST00000612273 PRAMEF1O95521 474 aa13.8□□□□□ -0.2
COL6A1-207ENST00000612273 SERPINA1P01009 418 aa13.8□□□□□ -0.2
COL6A1-207ENST00000612273 DCKP27707 260 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms