RNA–Protein interactions for RNA: ENST00000600517.1

ARHGEF1-222, Transcript of Rho guanine nucleotide exchange factor 1, human

TSL 3

Gene ARHGEF1, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGEF1-222	ENST00000600517	MPP5	Q8N3R9	675 aa		13.14	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	NAT8L	Q8N9F0	302 aa		13.14	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	SLCO2A1	Q92959	643 aa		13.14	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	ART4	Q93070	314 aa		13.14	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	MFSD3	Q96ES6	412 aa		13.14	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	TGM7	Q96PF1	710 aa		13.14	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	DDA1	Q9BW61	102 aa		13.14	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	DDX47	Q9H0S4	455 aa	Known RBP	13.14	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	PRORY	Q9H606	182 aa		13.14	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	FBXO8	Q9NRD0	319 aa		13.14	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	KCND1	Q9NSA2	647 aa		13.14	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	SLC39A1	Q9NY26	324 aa		13.14	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	SEMA5B	Q9P283	1151 aa		13.14	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	PCYOX1	Q9UHG3	505 aa		13.14	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	SAR1B	Q9Y6B6	198 aa		13.14	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	SLC5A10	A0PJK1	596 aa		13.13	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	CTAGE9	A4FU28	777 aa		13.13	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	SDR42E2	A6NKP2	422 aa		13.13	□□□□□ -0.31
ARHGEF1-222	ENST00000600517		F8W8V4	182 aa		13.13	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	IFRD1	O00458	451 aa	Predicted RBP	13.13	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	KIF1C	O43896	1103 aa	Known RBP	13.13	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	VAPB	O95292	243 aa		13.13	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	LIPC	P11150	499 aa		13.13	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	PREP	P48147	710 aa		13.13	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	ARCN1	P48444	511 aa	Known RBP	13.13	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	UCN	P55089	124 aa		13.13	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	RAB15	P59190	212 aa		13.13	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	BOP1	Q14137	746 aa	Known RBP	13.13	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	KRT33B	Q14525	404 aa		13.13	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	PLCL1	Q15111	1095 aa		13.13	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	DCAF12	Q5T6F0	453 aa		13.13	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	BROX	Q5VW32	411 aa		13.13	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	IRGC	Q6NXR0	463 aa		13.13	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	CES3	Q6UWW8	571 aa		13.13	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	PRSS42	Q7Z5A4	293 aa		13.13	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	ZFAND4	Q86XD8	727 aa		13.13	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	FAM129C	Q86XR2	697 aa		13.13	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	PHC3	Q8NDX5	983 aa		13.13	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	ACVR1C	Q8NER5	493 aa		13.13	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	JPH3	Q8WXH2	748 aa	Predicted RBP	13.13	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	KLHL6	Q8WZ60	621 aa		13.13	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	ELMO1	Q92556	727 aa		13.13	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	TFG	Q92734	400 aa	Predicted RBP	13.13	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	PMEPA1	Q969W9	287 aa		13.13	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	CRELD1	Q96HD1	420 aa		13.13	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	FERD3L	Q96RJ6	166 aa		13.13	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	CARD6	Q9BX69	1037 aa		13.13	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	MVB12B	Q9H7P6	319 aa		13.13	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	HRASLS2	Q9NWW9	162 aa		13.13	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	13.13	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	FAM237B	A0A1B0GVD1	139 aa		13.12	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	OR5K3	A6NET4	321 aa		13.12	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	BHMG1	C9JSJ3	638 aa	Predicted RBP	13.12	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	GOLGA8M	H3BSY2	632 aa		13.12	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	PRMT5	O14744	637 aa	Predicted RBP	13.12	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	FANCG	O15287	622 aa		13.12	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	ACADL	P28330	430 aa		13.12	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	CCR7	P32248	378 aa		13.12	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	PTGIR	P43119	386 aa		13.12	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	MAGEA3	P43357	314 aa		13.12	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	PPP1R7	Q15435	360 aa		13.12	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	TGIF1	Q15583	401 aa		13.12	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	RNASEH2B	Q5TBB1	312 aa	Known RBP	13.12	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	CACHD1	Q5VU97	1274 aa		13.12	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	ANKS6	Q68DC2	871 aa		13.12	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	KIAA0930	Q6ICG6	404 aa	Predicted RBP	13.12	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	MRNIP	Q6NTE8	343 aa		13.12	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	13.12	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	TMEM135	Q86UB9	458 aa		13.12	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	LRRC6	Q86X45	466 aa		13.12	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	PPIL6	Q8IXY8	311 aa		13.12	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	CAPZA3	Q96KX2	299 aa		13.12	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	SERPINB12	Q96P63	405 aa		13.12	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	TEFM	Q96QE5	360 aa	Known RBP	13.12	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	TCF12	Q99081	682 aa		13.12	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	CD180	Q99467	661 aa		13.12	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	ZPBP	Q9BS86	351 aa		13.12	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	SPRY4	Q9C004	299 aa		13.12	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	P2RY12	Q9H244	342 aa		13.12	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	ZNF768	Q9H5H4	540 aa	Known RBP	13.12	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	TFB2M	Q9H5Q4	396 aa	Known RBP	13.12	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	SIDT1	Q9NXL6	827 aa	Known RBP	13.12	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	RNF14	Q9UBS8	474 aa		13.12	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	B3GALT1	Q9Y5Z6	326 aa		13.12	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	13.12	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	AHCTF1	Q8WYP5	2266 aa		13.12	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	PTPRQ	Q9UMZ3	2332 aa		13.12	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	OR6C74	A6NCV1	312 aa		13.11	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	GPC4	O75487	556 aa		13.11	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	NDUFS3	O75489	264 aa		13.11	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	RASSF9	O75901	435 aa		13.11	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	NELFE	P18615	380 aa	Known RBP	13.11	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	RPS3	P23396	243 aa	Known RBP eCLIP	13.11	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	IVD	P26440	423 aa		13.11	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	TMPRSS3	P57727	454 aa		13.11	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	PPP1CA	P62136	330 aa		13.11	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	PTK6	Q13882	451 aa		13.11	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	BRD3	Q15059	726 aa		13.11	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	ANKRD20A4	Q4UJ75	823 aa		13.11	□□□□□ -0.31
ARHGEF1-222	ENST00000600517	CASC4	Q6P4E1	433 aa		13.11	□□□□□ -0.31

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