RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 IFRD1O00458 451 aaPredicted RBP15.4■□□□□ 0.06
VRK3-221ENST00000600284 TERTO14746 1132 aaKnown RBP15.4■□□□□ 0.06
VRK3-221ENST00000600284 KRT86O43790 486 aa15.4■□□□□ 0.06
VRK3-221ENST00000600284 AP2A2O94973 939 aa15.4■□□□□ 0.06
VRK3-221ENST00000600284 ZBTB11O95625 1053 aaPredicted RBP15.4■□□□□ 0.06
VRK3-221ENST00000600284 DLSTP36957 453 aa15.4■□□□□ 0.06
VRK3-221ENST00000600284 KCNAB2Q13303 367 aa15.4■□□□□ 0.06
VRK3-221ENST00000600284 LAMB3Q13751 1172 aa15.4■□□□□ 0.06
VRK3-221ENST00000600284 POU6F1Q14863 301 aa15.4■□□□□ 0.06
VRK3-221ENST00000600284 ZNF658BQ4V348 819 aaPredicted RBP15.4■□□□□ 0.06
VRK3-221ENST00000600284 SEL1L2Q5TEA6 688 aa15.4■□□□□ 0.06
VRK3-221ENST00000600284 TAS2R42Q7RTR8 314 aa15.4■□□□□ 0.06
VRK3-221ENST00000600284 SPC24Q8NBT2 197 aa15.4■□□□□ 0.06
VRK3-221ENST00000600284 ACVR1CQ8NER5 493 aa15.4■□□□□ 0.06
VRK3-221ENST00000600284 OR8K5Q8NH50 307 aa15.4■□□□□ 0.06
VRK3-221ENST00000600284 NAT14Q8WUY8 206 aa15.4■□□□□ 0.06
VRK3-221ENST00000600284 APOBEC4Q8WW27 367 aaKnown RBP15.4■□□□□ 0.06
VRK3-221ENST00000600284 ELMO2Q96JJ3 720 aa15.4■□□□□ 0.06
VRK3-221ENST00000600284 OR52A5Q9H2C5 316 aa15.4■□□□□ 0.06
VRK3-221ENST00000600284 COG4Q9H9E3 785 aa15.4■□□□□ 0.06
VRK3-221ENST00000600284 LNPEPQ9UIQ6 1025 aa15.4■□□□□ 0.06
VRK3-221ENST00000600284 PCDHGA6Q9Y5G7 932 aa15.4■□□□□ 0.06
VRK3-221ENST00000600284 OR6C74A6NCV1 312 aa15.39■□□□□ 0.05
VRK3-221ENST00000600284 CCL22O00626 93 aa15.39■□□□□ 0.05
VRK3-221ENST00000600284 SUV39H1O43463 412 aa15.39■□□□□ 0.05
VRK3-221ENST00000600284 GAS8O95995 478 aa15.39■□□□□ 0.05
VRK3-221ENST00000600284 PRKAR1AP10644 381 aa15.39■□□□□ 0.05
VRK3-221ENST00000600284 F8A1P23610 371 aa15.39■□□□□ 0.05
VRK3-221ENST00000600284 FDFT1P37268 417 aa15.39■□□□□ 0.05
VRK3-221ENST00000600284 NSG1P42857 185 aa15.39■□□□□ 0.05
VRK3-221ENST00000600284 CDKN1CP49918 316 aaPredicted RBP15.39■□□□□ 0.05
VRK3-221ENST00000600284 TUBB4BP68371 445 aa15.39■□□□□ 0.05
VRK3-221ENST00000600284 CDH17Q12864 832 aa15.39■□□□□ 0.05
VRK3-221ENST00000600284 PRKAA1Q13131 559 aa15.39■□□□□ 0.05
VRK3-221ENST00000600284 TUBB2AQ13885 445 aa15.39■□□□□ 0.05
VRK3-221ENST00000600284 SEPT6Q14141 434 aa15.39■□□□□ 0.05
VRK3-221ENST00000600284 ITIH4Q14624 930 aa15.39■□□□□ 0.05
VRK3-221ENST00000600284 OASLQ15646 514 aaKnown RBP15.39■□□□□ 0.05
VRK3-221ENST00000600284 TMTC4Q5T4D3 741 aa15.39■□□□□ 0.05
VRK3-221ENST00000600284 DUS1LQ6P1R4 473 aaKnown RBP15.39■□□□□ 0.05
VRK3-221ENST00000600284 ATG14Q6ZNE5 492 aa15.39■□□□□ 0.05
VRK3-221ENST00000600284 PRICKLE2Q7Z3G6 844 aa15.39■□□□□ 0.05
VRK3-221ENST00000600284 LILRA3Q8N6C8 439 aaPredicted RBP15.39■□□□□ 0.05
VRK3-221ENST00000600284 TUBB2BQ9BVA1 445 aa15.39■□□□□ 0.05
VRK3-221ENST00000600284 TFB2MQ9H5Q4 396 aaKnown RBP15.39■□□□□ 0.05
VRK3-221ENST00000600284 MVB12BQ9H7P6 319 aa15.39■□□□□ 0.05
VRK3-221ENST00000600284 LHX9Q9NQ69 397 aa15.39■□□□□ 0.05
VRK3-221ENST00000600284 C1GALT1Q9NS00 363 aa15.39■□□□□ 0.05
VRK3-221ENST00000600284 FGF21Q9NSA1 209 aa15.39■□□□□ 0.05
VRK3-221ENST00000600284 FAM8A1Q9UBU6 413 aa15.39■□□□□ 0.05
VRK3-221ENST00000600284 CROTQ9UKG9 612 aa15.39■□□□□ 0.05
VRK3-221ENST00000600284 RIMKLBQ9ULI2 386 aa15.39■□□□□ 0.05
VRK3-221ENST00000600284 BTRCQ9Y297 605 aa15.39■□□□□ 0.05
VRK3-221ENST00000600284 BSNQ9UPA5 3926 aa15.39■□□□□ 0.05
VRK3-221ENST00000600284 C21orf140B9A014 251 aa15.38■□□□□ 0.05
VRK3-221ENST00000600284 LIASO43766 372 aa15.38■□□□□ 0.05
VRK3-221ENST00000600284 SUN1O94901 812 aa15.38■□□□□ 0.05
VRK3-221ENST00000600284 EBLN1P0CF75 366 aa15.38■□□□□ 0.05
VRK3-221ENST00000600284 OAS2P29728 719 aaKnown RBP15.38■□□□□ 0.05
VRK3-221ENST00000600284 KPNA2P52292 529 aaKnown RBP15.38■□□□□ 0.05
VRK3-221ENST00000600284 GSDMDP57764 484 aa15.38■□□□□ 0.05
VRK3-221ENST00000600284 KCNAB1Q14722 419 aa15.38■□□□□ 0.05
VRK3-221ENST00000600284 PWWP2BQ6NUJ5 590 aa15.38■□□□□ 0.05
VRK3-221ENST00000600284 C16orf46Q6P387 395 aa15.38■□□□□ 0.05
VRK3-221ENST00000600284 SLC13A5Q86YT5 568 aaPredicted RBP15.38■□□□□ 0.05
VRK3-221ENST00000600284 PIANPQ8IYJ0 282 aa15.38■□□□□ 0.05
VRK3-221ENST00000600284 DNAAF3Q8N9W5 541 aa15.38■□□□□ 0.05
VRK3-221ENST00000600284 OR4E2Q8NGC2 313 aa15.38■□□□□ 0.05
VRK3-221ENST00000600284 LCN9Q8WX39 176 aa15.38■□□□□ 0.05
VRK3-221ENST00000600284 FERD3LQ96RJ6 166 aa15.38■□□□□ 0.05
VRK3-221ENST00000600284 SRMSQ9H3Y6 488 aa15.38■□□□□ 0.05
VRK3-221ENST00000600284 SYTL2Q9HCH5 934 aa15.38■□□□□ 0.05
VRK3-221ENST00000600284 LATS2Q9NRM7 1088 aa15.38■□□□□ 0.05
VRK3-221ENST00000600284 KCND1Q9NSA2 647 aa15.38■□□□□ 0.05
VRK3-221ENST00000600284 POMT2Q9UKY4 750 aa15.38■□□□□ 0.05
VRK3-221ENST00000600284 GUCA1BQ9UMX6 200 aa15.38■□□□□ 0.05
VRK3-221ENST00000600284 HEATR9A2RTY3 570 aa15.37■□□□□ 0.05
VRK3-221ENST00000600284 LIN7AO14910 233 aaPredicted RBP15.37■□□□□ 0.05
VRK3-221ENST00000600284 TIAF1O95411 115 aa15.37■□□□□ 0.05
VRK3-221ENST00000600284 POLR2CP19387 275 aaPredicted RBP15.37■□□□□ 0.05
VRK3-221ENST00000600284 MSNP26038 577 aaKnown RBP15.37■□□□□ 0.05
VRK3-221ENST00000600284 PLOD1Q02809 727 aaPredicted RBP15.37■□□□□ 0.05
VRK3-221ENST00000600284 DBN1Q16643 649 aa15.37■□□□□ 0.05
VRK3-221ENST00000600284 DEFB109BQ30KR1 87 aa15.37■□□□□ 0.05
VRK3-221ENST00000600284 LYPLAL1Q5VWZ2 237 aa15.37■□□□□ 0.05
VRK3-221ENST00000600284 PACS1Q6VY07 963 aa15.37■□□□□ 0.05
VRK3-221ENST00000600284 CLDN19Q8N6F1 224 aa15.37■□□□□ 0.05
VRK3-221ENST00000600284 OR52K1Q8NGK4 314 aa15.37■□□□□ 0.05
VRK3-221ENST00000600284 ATG4AQ8WYN0 398 aa15.37■□□□□ 0.05
VRK3-221ENST00000600284 SEC14L1Q92503 715 aa15.37■□□□□ 0.05
VRK3-221ENST00000600284 PEX13Q92968 403 aa15.37■□□□□ 0.05
VRK3-221ENST00000600284 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.37■□□□□ 0.05
VRK3-221ENST00000600284 ZNF501Q96CX3 271 aaPredicted RBP15.37■□□□□ 0.05
VRK3-221ENST00000600284 RANBP9Q96S59 729 aa15.37■□□□□ 0.05
VRK3-221ENST00000600284 TTC1Q99614 292 aa15.37■□□□□ 0.05
VRK3-221ENST00000600284 GPR87Q9BY21 358 aa15.37■□□□□ 0.05
VRK3-221ENST00000600284 ETNK1Q9HBU6 452 aa15.37■□□□□ 0.05
VRK3-221ENST00000600284 SMARCAL1Q9NZC9 954 aa15.37■□□□□ 0.05
VRK3-221ENST00000600284 ZNF148Q9UQR1 794 aa15.37■□□□□ 0.05
VRK3-221ENST00000600284 MRPS18BQ9Y676 258 aaKnown RBP15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms