RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 SLC24A2Q9UI40 661 aa20.57■□□□□ 0.88
PNKP-209ENST00000596726 PCDHGA3Q9Y5H0 932 aa20.57■□□□□ 0.88
PNKP-209ENST00000596726 PTPRQQ9UMZ3 2332 aa20.56■□□□□ 0.88
PNKP-209ENST00000596726 FAM237BA0A1B0GVD1 139 aa20.56■□□□□ 0.88
PNKP-209ENST00000596726 MAGEB16A2A368 324 aa20.56■□□□□ 0.88
PNKP-209ENST00000596726 F8W8V4 182 aa20.56■□□□□ 0.88
PNKP-209ENST00000596726 GOLGA8MH3BSY2 632 aa20.56■□□□□ 0.88
PNKP-209ENST00000596726 DNALI1O14645 258 aaPredicted RBP20.56■□□□□ 0.88
PNKP-209ENST00000596726 TOX3O15405 576 aaPredicted RBP20.56■□□□□ 0.88
PNKP-209ENST00000596726 PRAMEF10O60809 474 aa20.56■□□□□ 0.88
PNKP-209ENST00000596726 IVDP26440 423 aa20.56■□□□□ 0.88
PNKP-209ENST00000596726 NDUFS1P28331 727 aa20.56■□□□□ 0.88
PNKP-209ENST00000596726 ABCG1P45844 678 aa20.56■□□□□ 0.88
PNKP-209ENST00000596726 PREPP48147 710 aa20.56■□□□□ 0.88
PNKP-209ENST00000596726 LEPRP48357 1165 aaKnown RBP20.56■□□□□ 0.88
PNKP-209ENST00000596726 TLE3Q04726 772 aa20.56■□□□□ 0.88
PNKP-209ENST00000596726 COL28A1Q2UY09 1125 aa20.56■□□□□ 0.88
PNKP-209ENST00000596726 ZNF449Q6P9G9 518 aa20.56■□□□□ 0.88
PNKP-209ENST00000596726 AGGF1Q8N302 714 aaeCLIP20.56■□□□□ 0.88
PNKP-209ENST00000596726 C17orf53Q8N3J3 647 aaPredicted RBP20.56■□□□□ 0.88
PNKP-209ENST00000596726 ELMO1Q92556 727 aa20.56■□□□□ 0.88
PNKP-209ENST00000596726 RUNDC3BQ96NL0 473 aa20.56■□□□□ 0.88
PNKP-209ENST00000596726 FCRL3Q96P31 734 aaPredicted RBP20.56■□□□□ 0.88
PNKP-209ENST00000596726 CARD6Q9BX69 1037 aa20.56■□□□□ 0.88
PNKP-209ENST00000596726 P2RY12Q9H244 342 aa20.56■□□□□ 0.88
PNKP-209ENST00000596726 KLHL3Q9UH77 587 aa20.56■□□□□ 0.88
PNKP-209ENST00000596726 SDK2Q58EX2 2172 aa20.56■□□□□ 0.88
PNKP-209ENST00000596726 CHD6Q8TD26 2715 aa20.55■□□□□ 0.88
PNKP-209ENST00000596726 EFCAB7A8K855 629 aa20.55■□□□□ 0.88
PNKP-209ENST00000596726 CCDC188H7C350 402 aa20.55■□□□□ 0.88
PNKP-209ENST00000596726 IFRD1O00458 451 aaPredicted RBP20.55■□□□□ 0.88
PNKP-209ENST00000596726 PRMT5O14744 637 aaPredicted RBP20.55■□□□□ 0.88
PNKP-209ENST00000596726 ACADLP28330 430 aa20.55■□□□□ 0.88
PNKP-209ENST00000596726 PAFAH1B1P43034 410 aa20.55■□□□□ 0.88
PNKP-209ENST00000596726 MC2RQ01718 297 aa20.55■□□□□ 0.88
PNKP-209ENST00000596726 PLCL1Q15111 1095 aa20.55■□□□□ 0.88
PNKP-209ENST00000596726 ANKRD20A4Q4UJ75 823 aa20.55■□□□□ 0.88
PNKP-209ENST00000596726 KLHL35Q6PF15 583 aa20.55■□□□□ 0.88
PNKP-209ENST00000596726 SYDE1Q6ZW31 735 aaPredicted RBP20.55■□□□□ 0.88
PNKP-209ENST00000596726 PRSS42Q7Z5A4 293 aa20.55■□□□□ 0.88
PNKP-209ENST00000596726 TMEM135Q86UB9 458 aa20.55■□□□□ 0.88
PNKP-209ENST00000596726 PDZD3Q86UT5 571 aa20.55■□□□□ 0.88
PNKP-209ENST00000596726 TFGQ92734 400 aaPredicted RBP20.55■□□□□ 0.88
PNKP-209ENST00000596726 ZDHHC12Q96GR4 267 aa20.55■□□□□ 0.88
PNKP-209ENST00000596726 SIGLEC10Q96LC7 697 aa20.55■□□□□ 0.88
PNKP-209ENST00000596726 TRIM56Q9BRZ2 755 aaKnown RBP20.55■□□□□ 0.88
PNKP-209ENST00000596726 FOXJ2Q9P0K8 574 aa20.55■□□□□ 0.88
PNKP-209ENST00000596726 SEMA5BQ9P283 1151 aa20.55■□□□□ 0.88
PNKP-209ENST00000596726 ASIC3Q9UHC3 531 aa20.55■□□□□ 0.88
PNKP-209ENST00000596726 OR5K3A6NET4 321 aa20.54■□□□□ 0.88
PNKP-209ENST00000596726 BHMG1C9JSJ3 638 aaPredicted RBP20.54■□□□□ 0.88
PNKP-209ENST00000596726 RPS3P23396 243 aaKnown RBP eCLIP20.54■□□□□ 0.88
PNKP-209ENST00000596726 CCR7P32248 378 aa20.54■□□□□ 0.88
PNKP-209ENST00000596726 PPP1CAP62136 330 aa20.54■□□□□ 0.88
PNKP-209ENST00000596726 PLOD1Q02809 727 aaPredicted RBP20.54■□□□□ 0.88
PNKP-209ENST00000596726 CLN3Q13286 438 aa20.54■□□□□ 0.88
PNKP-209ENST00000596726 BOP1Q14137 746 aaKnown RBP20.54■□□□□ 0.88
PNKP-209ENST00000596726 TYSND1Q2T9J0 566 aa20.54■□□□□ 0.88
PNKP-209ENST00000596726 TMEM164Q5U3C3 297 aa20.54■□□□□ 0.88
PNKP-209ENST00000596726 MRNIPQ6NTE8 343 aa20.54■□□□□ 0.88
PNKP-209ENST00000596726 CASC4Q6P4E1 433 aa20.54■□□□□ 0.88
PNKP-209ENST00000596726 NAPRTQ6XQN6 538 aa20.54■□□□□ 0.88
PNKP-209ENST00000596726 PCGF5Q86SE9 256 aa20.54■□□□□ 0.88
PNKP-209ENST00000596726 KLHL7Q8IXQ5 586 aa20.54■□□□□ 0.88
PNKP-209ENST00000596726 ACVR1CQ8NER5 493 aa20.54■□□□□ 0.88
PNKP-209ENST00000596726 LKAAEAR1Q8TD35 194 aa20.54■□□□□ 0.88
PNKP-209ENST00000596726 KLHL6Q8WZ60 621 aa20.54■□□□□ 0.88
PNKP-209ENST00000596726 ART4Q93070 314 aa20.54■□□□□ 0.88
PNKP-209ENST00000596726 PMEPA1Q969W9 287 aa20.54■□□□□ 0.88
PNKP-209ENST00000596726 FERD3LQ96RJ6 166 aa20.54■□□□□ 0.88
PNKP-209ENST00000596726 DDA1Q9BW61 102 aa20.54■□□□□ 0.88
PNKP-209ENST00000596726 ZNF768Q9H5H4 540 aaKnown RBP20.54■□□□□ 0.88
PNKP-209ENST00000596726 MVB12BQ9H7P6 319 aa20.54■□□□□ 0.88
PNKP-209ENST00000596726 SIDT1Q9NXL6 827 aaKnown RBP20.54■□□□□ 0.88
PNKP-209ENST00000596726 SLC39A1Q9NY26 324 aa20.54■□□□□ 0.88
PNKP-209ENST00000596726 SAMD15Q9P1V8 674 aa20.54■□□□□ 0.88
PNKP-209ENST00000596726 ZCWPW2A0A1B0GU75 182 aa20.53■□□□□ 0.88
PNKP-209ENST00000596726 IQCF5A8MTL0 148 aa20.53■□□□□ 0.88
PNKP-209ENST00000596726 GOLGA8KD6RF30 607 aa20.53■□□□□ 0.88
PNKP-209ENST00000596726 GOLGA8TH3BQL2 631 aa20.53■□□□□ 0.88
PNKP-209ENST00000596726 KIF1CO43896 1103 aaKnown RBP20.53■□□□□ 0.88
PNKP-209ENST00000596726 GPC4O75487 556 aa20.53■□□□□ 0.88
PNKP-209ENST00000596726 NDUFS3O75489 264 aa20.53■□□□□ 0.88
PNKP-209ENST00000596726 PAMP19021 973 aa20.53■□□□□ 0.88
PNKP-209ENST00000596726 CD82P27701 267 aa20.53■□□□□ 0.88
PNKP-209ENST00000596726 RAB15P59190 212 aa20.53■□□□□ 0.88
PNKP-209ENST00000596726 ETF1P62495 437 aaKnown RBP20.53■□□□□ 0.88
PNKP-209ENST00000596726 KRT33BQ14525 404 aa20.53■□□□□ 0.88
PNKP-209ENST00000596726 BRD3Q15059 726 aa20.53■□□□□ 0.88
PNKP-209ENST00000596726 HOOK3Q86VS8 718 aa20.53■□□□□ 0.88
PNKP-209ENST00000596726 LRRC6Q86X45 466 aa20.53■□□□□ 0.88
PNKP-209ENST00000596726 FAM129CQ86XR2 697 aa20.53■□□□□ 0.88
PNKP-209ENST00000596726 PHC3Q8NDX5 983 aa20.53■□□□□ 0.88
PNKP-209ENST00000596726 CRELD1Q96HD1 420 aa20.53■□□□□ 0.88
PNKP-209ENST00000596726 TCF12Q99081 682 aa20.53■□□□□ 0.88
PNKP-209ENST00000596726 FBXO8Q9NRD0 319 aa20.53■□□□□ 0.88
PNKP-209ENST00000596726 HRASLS2Q9NWW9 162 aa20.53■□□□□ 0.88
PNKP-209ENST00000596726 CDYLQ9Y232 598 aa20.53■□□□□ 0.88
PNKP-209ENST00000596726 IQCJ-SCHIP1C9J366 451 aaPredicted RBP20.52■□□□□ 0.88
PNKP-209ENST00000596726 KLK10O43240 276 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms