RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 DUS1LQ6P1R4 473 aaKnown RBP10.33□□□□□ -0.76
LIG1-210ENST00000596332 TRMT10CQ7L0Y3 403 aaKnown RBP10.33□□□□□ -0.76
LIG1-210ENST00000596332 TMPRSS9Q7Z410 1059 aa10.33□□□□□ -0.76
LIG1-210ENST00000596332 OTUD6BQ8N6M0 293 aa10.33□□□□□ -0.76
LIG1-210ENST00000596332 PHC3Q8NDX5 983 aa10.33□□□□□ -0.76
LIG1-210ENST00000596332 UHMK1Q8TAS1 419 aaKnown RBP10.33□□□□□ -0.76
LIG1-210ENST00000596332 DCAKDQ8WVC6 231 aa10.33□□□□□ -0.76
LIG1-210ENST00000596332 SLC44A1Q8WWI5 657 aa10.33□□□□□ -0.76
LIG1-210ENST00000596332 ELMO1Q92556 727 aa10.33□□□□□ -0.76
LIG1-210ENST00000596332 DLG3Q92796 817 aa10.33□□□□□ -0.76
LIG1-210ENST00000596332 VPS39Q96JC1 886 aa10.33□□□□□ -0.76
LIG1-210ENST00000596332 GPR21Q99679 349 aa10.33□□□□□ -0.76
LIG1-210ENST00000596332 GPR22Q99680 433 aa10.33□□□□□ -0.76
LIG1-210ENST00000596332 RBBP8Q99708 897 aa10.33□□□□□ -0.76
LIG1-210ENST00000596332 CPNE1Q99829 537 aa10.33□□□□□ -0.76
LIG1-210ENST00000596332 RTKNQ9BST9 563 aa10.33□□□□□ -0.76
LIG1-210ENST00000596332 OSGEPL1Q9H4B0 414 aa10.33□□□□□ -0.76
LIG1-210ENST00000596332 RHOJQ9H4E5 214 aa10.33□□□□□ -0.76
LIG1-210ENST00000596332 VPS37BQ9H9H4 285 aa10.33□□□□□ -0.76
LIG1-210ENST00000596332 SARS2Q9NP81 518 aaKnown RBP10.33□□□□□ -0.76
LIG1-210ENST00000596332 PPANQ9NQ55 473 aaKnown RBP10.33□□□□□ -0.76
LIG1-210ENST00000596332 EURLQ9NYK6 297 aa10.33□□□□□ -0.76
LIG1-210ENST00000596332 KLHL42Q9P2K6 505 aa10.33□□□□□ -0.76
LIG1-210ENST00000596332 CPNE7Q9UBL6 633 aa10.33□□□□□ -0.76
LIG1-210ENST00000596332 WASF3Q9UPY6 502 aa10.33□□□□□ -0.76
LIG1-210ENST00000596332 VWA7Q9Y334 891 aa10.33□□□□□ -0.76
LIG1-210ENST00000596332 NFS1Q9Y697 457 aa10.33□□□□□ -0.76
LIG1-210ENST00000596332 CFAP20Q9Y6A4 193 aaKnown RBP10.33□□□□□ -0.76
LIG1-210ENST00000596332 ZFC3H1O60293 1989 aaKnown RBP10.33□□□□□ -0.76
LIG1-210ENST00000596332 KIR2DS5A0A0G2JLQ3 304 aa10.32□□□□□ -0.76
LIG1-210ENST00000596332 A0A0G2JNG1 304 aa10.32□□□□□ -0.76
LIG1-210ENST00000596332 KIR2DS3K7RE56 304 aa10.32□□□□□ -0.76
LIG1-210ENST00000596332 NTN3O00634 580 aaPredicted RBP10.32□□□□□ -0.76
LIG1-210ENST00000596332 NUDT21O43809 227 aaKnown RBP10.32□□□□□ -0.76
LIG1-210ENST00000596332 MTHFD1P11586 935 aaKnown RBP10.32□□□□□ -0.76
LIG1-210ENST00000596332 GLB1P16278 677 aa10.32□□□□□ -0.76
LIG1-210ENST00000596332 STX2P32856 288 aa10.32□□□□□ -0.76
LIG1-210ENST00000596332 HSD17B3P37058 310 aa10.32□□□□□ -0.76
LIG1-210ENST00000596332 GP5P40197 560 aa10.32□□□□□ -0.76
LIG1-210ENST00000596332 LIMK2P53671 638 aa10.32□□□□□ -0.76
LIG1-210ENST00000596332 CSE1LP55060 971 aaKnown RBP10.32□□□□□ -0.76
LIG1-210ENST00000596332 CLDN6P56747 220 aa10.32□□□□□ -0.76
LIG1-210ENST00000596332 HSPA14Q0VDF9 509 aa10.32□□□□□ -0.76
LIG1-210ENST00000596332 SQSTM1Q13501 440 aa10.32□□□□□ -0.76
LIG1-210ENST00000596332 BOP1Q14137 746 aaKnown RBP10.32□□□□□ -0.76
LIG1-210ENST00000596332 ZNF460Q14592 562 aa10.32□□□□□ -0.76
LIG1-210ENST00000596332 KIR2DS5Q14953 304 aa10.32□□□□□ -0.76
LIG1-210ENST00000596332 ZKSCAN8Q15776 578 aaPredicted RBP10.32□□□□□ -0.76
LIG1-210ENST00000596332 ZXDCQ2QGD7 858 aaPredicted RBP10.32□□□□□ -0.76
LIG1-210ENST00000596332 CCSMST1Q4G0I0 132 aa10.32□□□□□ -0.76
LIG1-210ENST00000596332 PAQR3Q6TCH7 311 aa10.32□□□□□ -0.76
LIG1-210ENST00000596332 ZNF574Q6ZN55 896 aaPredicted RBP10.32□□□□□ -0.76
LIG1-210ENST00000596332 PDZD3Q86UT5 571 aa10.32□□□□□ -0.76
LIG1-210ENST00000596332 ZNF761Q86XN6 746 aaPredicted RBP10.32□□□□□ -0.76
LIG1-210ENST00000596332 PPM1NQ8N819 430 aa10.32□□□□□ -0.76
LIG1-210ENST00000596332 MZB1Q8WU39 189 aa10.32□□□□□ -0.76
LIG1-210ENST00000596332 ANKRD49Q8WVL7 239 aa10.32□□□□□ -0.76
LIG1-210ENST00000596332 GLMNQ92990 594 aa10.32□□□□□ -0.76
LIG1-210ENST00000596332 CAVIN3Q969G5 261 aa10.32□□□□□ -0.76
LIG1-210ENST00000596332 CCDC74AQ96AQ1 378 aa10.32□□□□□ -0.76
LIG1-210ENST00000596332 CYTH2Q99418 400 aa10.32□□□□□ -0.76
LIG1-210ENST00000596332 CDC6Q99741 560 aa10.32□□□□□ -0.76
LIG1-210ENST00000596332 CAB39LQ9H9S4 337 aa10.32□□□□□ -0.76
LIG1-210ENST00000596332 LRIT1Q9P2V4 623 aa10.32□□□□□ -0.76
LIG1-210ENST00000596332 FTSJ1Q9UET6 329 aa10.32□□□□□ -0.76
LIG1-210ENST00000596332 RUVBL2Q9Y230 463 aaKnown RBP10.32□□□□□ -0.76
LIG1-210ENST00000596332 VPS9D1Q9Y2B5 631 aa10.32□□□□□ -0.76
LIG1-210ENST00000596332 COMMD10Q9Y6G5 202 aa10.32□□□□□ -0.76
LIG1-210ENST00000596332 FAM95CA0A1B0GW59 222 aa10.31□□□□□ -0.76
LIG1-210ENST00000596332 KRT87PA6NCN2 255 aa10.31□□□□□ -0.76
LIG1-210ENST00000596332 OR5K4A6NMS3 321 aa10.31□□□□□ -0.76
LIG1-210ENST00000596332 H3BMM5 538 aa10.31□□□□□ -0.76
LIG1-210ENST00000596332 ALPPL2P10696 532 aa10.31□□□□□ -0.76
LIG1-210ENST00000596332 PNLIPP16233 465 aa10.31□□□□□ -0.76
LIG1-210ENST00000596332 VCLP18206 1134 aa10.31□□□□□ -0.76
LIG1-210ENST00000596332 CHRM3P20309 590 aa10.31□□□□□ -0.76
LIG1-210ENST00000596332 CD1CP29017 333 aa10.31□□□□□ -0.76
LIG1-210ENST00000596332 ATP5DP30049 168 aa10.31□□□□□ -0.76
LIG1-210ENST00000596332 MAGEA12P43365 314 aa10.31□□□□□ -0.76
LIG1-210ENST00000596332 PDX1P52945 283 aa10.31□□□□□ -0.76
LIG1-210ENST00000596332 OR1D5P58170 312 aa10.31□□□□□ -0.76
LIG1-210ENST00000596332 DLG1Q12959 904 aa10.31□□□□□ -0.76
LIG1-210ENST00000596332 NR0B2Q15466 257 aa10.31□□□□□ -0.76
LIG1-210ENST00000596332 GRTP1Q5TC63 336 aa10.31□□□□□ -0.76
LIG1-210ENST00000596332 CDCP2Q5VXM1 449 aa10.31□□□□□ -0.76
LIG1-210ENST00000596332 CEP128Q6ZU80 1094 aa10.31□□□□□ -0.76
LIG1-210ENST00000596332 EFL1Q7Z2Z2 1120 aaKnown RBP10.31□□□□□ -0.76
LIG1-210ENST00000596332 CPNE9Q8IYJ1 553 aa10.31□□□□□ -0.76
LIG1-210ENST00000596332 ZBTB2Q8N680 514 aa10.31□□□□□ -0.76
LIG1-210ENST00000596332 LMNTD1Q8N9Z9 388 aa10.31□□□□□ -0.76
LIG1-210ENST00000596332 OR5AR1Q8NGP9 310 aa10.31□□□□□ -0.76
LIG1-210ENST00000596332 IFI44Q8TCB0 444 aa10.31□□□□□ -0.76
LIG1-210ENST00000596332 EEF1AKMT1Q8WVE0 214 aa10.31□□□□□ -0.76
LIG1-210ENST00000596332 ASZ1Q8WWH4 475 aa10.31□□□□□ -0.76
LIG1-210ENST00000596332 TFGQ92734 400 aaPredicted RBP10.31□□□□□ -0.76
LIG1-210ENST00000596332 INPP5DQ92835 1189 aa10.31□□□□□ -0.76
LIG1-210ENST00000596332 ISL2Q96A47 359 aa10.31□□□□□ -0.76
LIG1-210ENST00000596332 ATXN7L3BQ96GX2 97 aa10.31□□□□□ -0.76
LIG1-210ENST00000596332 PDLIM5Q96HC4 596 aaKnown RBP10.31□□□□□ -0.76
LIG1-210ENST00000596332 PANX3Q96QZ0 392 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms