RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 OR52A5Q9H2C5 316 aa18.9■□□□□ 0.62
PNKP-207ENST00000596014 CCDC68Q9H2F9 335 aa18.9■□□□□ 0.62
PNKP-207ENST00000596014 SARS2Q9NP81 518 aaKnown RBP18.9■□□□□ 0.62
PNKP-207ENST00000596014 RABGEF1Q9UJ41 708 aa18.9■□□□□ 0.62
PNKP-207ENST00000596014 CACNA1AO00555 2505 aa18.9■□□□□ 0.62
PNKP-207ENST00000596014 RHPN2P1A8MT19 583 aa18.89■□□□□ 0.61
PNKP-207ENST00000596014 PIAS1O75925 651 aa18.89■□□□□ 0.61
PNKP-207ENST00000596014 C1QAP02745 245 aa18.89■□□□□ 0.61
PNKP-207ENST00000596014 PNLIPP16233 465 aa18.89■□□□□ 0.61
PNKP-207ENST00000596014 CHRM3P20309 590 aa18.89■□□□□ 0.61
PNKP-207ENST00000596014 CSE1LP55060 971 aaKnown RBP18.89■□□□□ 0.61
PNKP-207ENST00000596014 UBE2IP63279 158 aaKnown RBP18.89■□□□□ 0.61
PNKP-207ENST00000596014 HHEXQ03014 270 aa18.89■□□□□ 0.61
PNKP-207ENST00000596014 GABPB1Q06547 395 aaPredicted RBP18.89■□□□□ 0.61
PNKP-207ENST00000596014 HSPA14Q0VDF9 509 aa18.89■□□□□ 0.61
PNKP-207ENST00000596014 SYTL3Q4VX76 610 aa18.89■□□□□ 0.61
PNKP-207ENST00000596014 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.89■□□□□ 0.61
PNKP-207ENST00000596014 EIF1ADQ8N9N8 165 aaKnown RBP18.89■□□□□ 0.61
PNKP-207ENST00000596014 TMEM159Q96B96 161 aa18.89■□□□□ 0.61
PNKP-207ENST00000596014 RMDN2Q96LZ7 410 aa18.89■□□□□ 0.61
PNKP-207ENST00000596014 NINJ2Q9NZG7 142 aa18.89■□□□□ 0.61
PNKP-207ENST00000596014 PSAT1Q9Y617 370 aa18.89■□□□□ 0.61
PNKP-207ENST00000596014 COMMD10Q9Y6G5 202 aa18.89■□□□□ 0.61
PNKP-207ENST00000596014 KNTC1P50748 2209 aa18.89■□□□□ 0.61
PNKP-207ENST00000596014 CXorf49A8MYA2 514 aaPredicted RBP18.89■□□□□ 0.61
PNKP-207ENST00000596014 KPNA5O15131 536 aa18.89■□□□□ 0.61
PNKP-207ENST00000596014 GPC4O75487 556 aa18.89■□□□□ 0.61
PNKP-207ENST00000596014 APOA4P06727 396 aa18.89■□□□□ 0.61
PNKP-207ENST00000596014 PLOD1Q02809 727 aaPredicted RBP18.89■□□□□ 0.61
PNKP-207ENST00000596014 OTOAQ7RTW8 1153 aa18.89■□□□□ 0.61
PNKP-207ENST00000596014 ZNF438Q7Z4V0 828 aa18.89■□□□□ 0.61
PNKP-207ENST00000596014 SLC26A11Q86WA9 606 aa18.89■□□□□ 0.61
PNKP-207ENST00000596014 AVL9Q8NBF6 648 aa18.89■□□□□ 0.61
PNKP-207ENST00000596014 CDKL2Q92772 493 aa18.89■□□□□ 0.61
PNKP-207ENST00000596014 FAM136AQ96C01 138 aa18.89■□□□□ 0.61
PNKP-207ENST00000596014 CCDC3Q9BQI4 270 aa18.89■□□□□ 0.61
PNKP-207ENST00000596014 CDC42EP4Q9H3Q1 356 aaKnown RBP18.89■□□□□ 0.61
PNKP-207ENST00000596014 LATS2Q9NRM7 1088 aa18.89■□□□□ 0.61
PNKP-207ENST00000596014 GALPQ9UBC7 116 aa18.89■□□□□ 0.61
PNKP-207ENST00000596014 CDYLQ9Y232 598 aa18.89■□□□□ 0.61
PNKP-207ENST00000596014 MED16Q9Y2X0 877 aa18.89■□□□□ 0.61
PNKP-207ENST00000596014 FAM159BA6NKW6 160 aa18.88■□□□□ 0.61
PNKP-207ENST00000596014 E5RI56 91 aa18.88■□□□□ 0.61
PNKP-207ENST00000596014 VIPP01282 170 aa18.88■□□□□ 0.61
PNKP-207ENST00000596014 CDK4P11802 303 aa18.88■□□□□ 0.61
PNKP-207ENST00000596014 ABCG1P45844 678 aa18.88■□□□□ 0.61
PNKP-207ENST00000596014 CD151P48509 253 aa18.88■□□□□ 0.61
PNKP-207ENST00000596014 E2F1Q01094 437 aa18.88■□□□□ 0.61
PNKP-207ENST00000596014 SLMAPQ14BN4 828 aa18.88■□□□□ 0.61
PNKP-207ENST00000596014 STRA8Q7Z7C7 330 aa18.88■□□□□ 0.61
PNKP-207ENST00000596014 TRIM48Q8IWZ4 208 aa18.88■□□□□ 0.61
PNKP-207ENST00000596014 FBF1Q8TES7 1133 aa18.88■□□□□ 0.61
PNKP-207ENST00000596014 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.88■□□□□ 0.61
PNKP-207ENST00000596014 CXorf40BQ96DE9 158 aa18.88■□□□□ 0.61
PNKP-207ENST00000596014 C12orf66Q96MD2 445 aa18.88■□□□□ 0.61
PNKP-207ENST00000596014 AARSD1Q9BTE6 412 aaKnown RBP18.88■□□□□ 0.61
PNKP-207ENST00000596014 STN1Q9H668 368 aaKnown RBP18.88■□□□□ 0.61
PNKP-207ENST00000596014 SLC40A1Q9NP59 571 aa18.88■□□□□ 0.61
PNKP-207ENST00000596014 IMP3Q9NV31 184 aaKnown RBP18.88■□□□□ 0.61
PNKP-207ENST00000596014 NSMCE4AQ9NXX6 385 aa18.88■□□□□ 0.61
PNKP-207ENST00000596014 CFAP20Q9Y6A4 193 aaKnown RBP18.88■□□□□ 0.61
PNKP-207ENST00000596014 PRAMEF33A0A0G2JMD5 474 aa18.87■□□□□ 0.61
PNKP-207ENST00000596014 SLCO2B1O94956 709 aa18.87■□□□□ 0.61
PNKP-207ENST00000596014 FAM153BP0C7A2 387 aa18.87■□□□□ 0.61
PNKP-207ENST00000596014 MTHFD1P11586 935 aaKnown RBP18.87■□□□□ 0.61
PNKP-207ENST00000596014 STX2P32856 288 aa18.87■□□□□ 0.61
PNKP-207ENST00000596014 GPR3P46089 330 aa18.87■□□□□ 0.61
PNKP-207ENST00000596014 NR1D2Q14995 579 aa18.87■□□□□ 0.61
PNKP-207ENST00000596014 FAM153CQ494X1 144 aa18.87■□□□□ 0.61
PNKP-207ENST00000596014 UBAP2Q5T6F2 1119 aaKnown RBP18.87■□□□□ 0.61
PNKP-207ENST00000596014 N4BP2L1Q5TBK1 243 aaPredicted RBP18.87■□□□□ 0.61
PNKP-207ENST00000596014 DHRS13Q6UX07 377 aa18.87■□□□□ 0.61
PNKP-207ENST00000596014 ZNF761Q86XN6 746 aaPredicted RBP18.87■□□□□ 0.61
PNKP-207ENST00000596014 VRK3Q8IV63 474 aa18.87■□□□□ 0.61
PNKP-207ENST00000596014 Q8N9G6 341 aaPredicted RBP18.87■□□□□ 0.61
PNKP-207ENST00000596014 KCNJ9Q92806 393 aa18.87■□□□□ 0.61
PNKP-207ENST00000596014 SH3KBP1Q96B97 665 aa18.87■□□□□ 0.61
PNKP-207ENST00000596014 NDNQ99608 321 aa18.87■□□□□ 0.61
PNKP-207ENST00000596014 MED4Q9NPJ6 270 aa18.87■□□□□ 0.61
PNKP-207ENST00000596014 POT1Q9NUX5 634 aa18.87■□□□□ 0.61
PNKP-207ENST00000596014 IFRD1O00458 451 aaPredicted RBP18.86■□□□□ 0.61
PNKP-207ENST00000596014 CASC3O15234 703 aaKnown RBP18.86■□□□□ 0.61
PNKP-207ENST00000596014 B4GAT1O43505 415 aa18.86■□□□□ 0.61
PNKP-207ENST00000596014 ACADLP28330 430 aa18.86■□□□□ 0.61
PNKP-207ENST00000596014 CLCN7P51798 805 aa18.86■□□□□ 0.61
PNKP-207ENST00000596014 TMED2Q15363 201 aa18.86■□□□□ 0.61
PNKP-207ENST00000596014 KBTBD12Q3ZCT8 623 aa18.86■□□□□ 0.61
PNKP-207ENST00000596014 PLEKHS1Q5SXH7 462 aa18.86■□□□□ 0.61
PNKP-207ENST00000596014 RBM20Q5T481 1227 aaKnown RBP18.86■□□□□ 0.61
PNKP-207ENST00000596014 SPRED1Q7Z699 444 aa18.86■□□□□ 0.61
PNKP-207ENST00000596014 PDZD3Q86UT5 571 aa18.86■□□□□ 0.61
PNKP-207ENST00000596014 SLC22A15Q8IZD6 547 aa18.86■□□□□ 0.61
PNKP-207ENST00000596014 ADAMTS14Q8WXS8 1223 aa18.86■□□□□ 0.61
PNKP-207ENST00000596014 SLC38A3Q99624 504 aa18.86■□□□□ 0.61
PNKP-207ENST00000596014 ABCG4Q9H172 646 aa18.86■□□□□ 0.61
PNKP-207ENST00000596014 OPA1O60313 960 aa18.85■□□□□ 0.61
PNKP-207ENST00000596014 ACSL3O95573 720 aa18.85■□□□□ 0.61
PNKP-207ENST00000596014 ALDH4A1P30038 563 aa18.85■□□□□ 0.61
PNKP-207ENST00000596014 PHBP35232 272 aa18.85■□□□□ 0.61
PNKP-207ENST00000596014 OR1D5P58170 312 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms