RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 G3BP2Q9UN86 482 aaKnown RBP9.26□□□□□ -0.93
BRCA1-226ENST00000591534 HYOU1Q9Y4L1 999 aa9.26□□□□□ -0.93
BRCA1-226ENST00000591534 PCDHGA6Q9Y5G7 932 aa9.26□□□□□ -0.93
BRCA1-226ENST00000591534 BSNQ9UPA5 3926 aa9.26□□□□□ -0.93
BRCA1-226ENST00000591534 NAV2Q8IVL1 2488 aa9.26□□□□□ -0.93
BRCA1-226ENST00000591534 GRID2IPA4D2P6 1211 aa9.25□□□□□ -0.93
BRCA1-226ENST00000591534 CYSRT1A8MQ03 144 aa9.25□□□□□ -0.93
BRCA1-226ENST00000591534 NDC80O14777 642 aa9.25□□□□□ -0.93
BRCA1-226ENST00000591534 CHUKO15111 745 aa9.25□□□□□ -0.93
BRCA1-226ENST00000591534 PSTPIP1O43586 416 aa9.25□□□□□ -0.93
BRCA1-226ENST00000591534 SPAG6O75602 509 aa9.25□□□□□ -0.93
BRCA1-226ENST00000591534 CREG1O75629 220 aa9.25□□□□□ -0.93
BRCA1-226ENST00000591534 KIAA0754O94854 1291 aa9.25□□□□□ -0.93
BRCA1-226ENST00000591534 PROSCO94903 275 aa9.25□□□□□ -0.93
BRCA1-226ENST00000591534 GSTT1P30711 240 aa9.25□□□□□ -0.93
BRCA1-226ENST00000591534 CD97P48960 835 aa9.25□□□□□ -0.93
BRCA1-226ENST00000591534 PMS2P54278 862 aa9.25□□□□□ -0.93
BRCA1-226ENST00000591534 GFERP55789 205 aa9.25□□□□□ -0.93
BRCA1-226ENST00000591534 RPS15P62841 145 aaKnown RBP9.25□□□□□ -0.93
BRCA1-226ENST00000591534 IFI35P80217 286 aaPredicted RBP9.25□□□□□ -0.93
BRCA1-226ENST00000591534 ACY1Q03154 408 aa9.25□□□□□ -0.93
BRCA1-226ENST00000591534 CDK18Q07002 472 aa9.25□□□□□ -0.93
BRCA1-226ENST00000591534 PPIDQ08752 370 aaKnown RBP9.25□□□□□ -0.93
BRCA1-226ENST00000591534 AP1B1Q10567 949 aa9.25□□□□□ -0.93
BRCA1-226ENST00000591534 SLC14A2Q15849 920 aa9.25□□□□□ -0.93
BRCA1-226ENST00000591534 SEPT7Q16181 437 aaKnown RBP9.25□□□□□ -0.93
BRCA1-226ENST00000591534 RNFT1Q5M7Z0 435 aa9.25□□□□□ -0.93
BRCA1-226ENST00000591534 ALS2CLQ60I27 953 aa9.25□□□□□ -0.93
BRCA1-226ENST00000591534 IRGCQ6NXR0 463 aa9.25□□□□□ -0.93
BRCA1-226ENST00000591534 CRTC3Q6UUV7 619 aa9.25□□□□□ -0.93
BRCA1-226ENST00000591534 SYT10Q6XYQ8 523 aa9.25□□□□□ -0.93
BRCA1-226ENST00000591534 TMC3Q7Z5M5 1100 aa9.25□□□□□ -0.93
BRCA1-226ENST00000591534 ADGRG6Q86SQ4 1221 aa9.25□□□□□ -0.93
BRCA1-226ENST00000591534 VSIG1Q86XK7 387 aa9.25□□□□□ -0.93
BRCA1-226ENST00000591534 KMT5CQ86Y97 462 aa9.25□□□□□ -0.93
BRCA1-226ENST00000591534 TRAPPC5Q8IUR0 188 aa9.25□□□□□ -0.93
BRCA1-226ENST00000591534 BEND7Q8N7W2 519 aaPredicted RBP9.25□□□□□ -0.93
BRCA1-226ENST00000591534 GDAP1Q8TB36 358 aa9.25□□□□□ -0.93
BRCA1-226ENST00000591534 KLHL6Q8WZ60 621 aa9.25□□□□□ -0.93
BRCA1-226ENST00000591534 FAF2Q96CS3 445 aa9.25□□□□□ -0.93
BRCA1-226ENST00000591534 VPS35Q96QK1 796 aa9.25□□□□□ -0.93
BRCA1-226ENST00000591534 SMIM14Q96QK8 99 aa9.25□□□□□ -0.93
BRCA1-226ENST00000591534 WDR24Q96S15 920 aa9.25□□□□□ -0.93
BRCA1-226ENST00000591534 SLC25A51Q9H1U9 297 aa9.25□□□□□ -0.93
BRCA1-226ENST00000591534 SLC40A1Q9NP59 571 aa9.25□□□□□ -0.93
BRCA1-226ENST00000591534 DTLQ9NZJ0 730 aa9.25□□□□□ -0.93
BRCA1-226ENST00000591534 RARRES3Q9UL19 164 aa9.25□□□□□ -0.93
BRCA1-226ENST00000591534 TP53TG5Q9Y2B4 290 aa9.25□□□□□ -0.93
BRCA1-226ENST00000591534 MAN2B2Q9Y2E5 1009 aa9.25□□□□□ -0.93
BRCA1-226ENST00000591534 DNAJC16Q9Y2G8 782 aa9.25□□□□□ -0.93
BRCA1-226ENST00000591534 REXO2Q9Y3B8 237 aaKnown RBP9.25□□□□□ -0.93
BRCA1-226ENST00000591534 PCDHGB7Q9Y5F8 929 aa9.25□□□□□ -0.93
BRCA1-226ENST00000591534 KLHL33A6NCF5 533 aa9.24□□□□□ -0.93
BRCA1-226ENST00000591534 ZNF487B1APH4 448 aa9.24□□□□□ -0.93
BRCA1-226ENST00000591534 KCNK1O00180 336 aa9.24□□□□□ -0.93
BRCA1-226ENST00000591534 WFS1O76024 890 aa9.24□□□□□ -0.93
BRCA1-226ENST00000591534 GHRHP01286 108 aa9.24□□□□□ -0.93
BRCA1-226ENST00000591534 SLC4A1P02730 911 aa9.24□□□□□ -0.93
BRCA1-226ENST00000591534 NELFEP18615 380 aaKnown RBP9.24□□□□□ -0.93
BRCA1-226ENST00000591534 GBE1Q04446 702 aa9.24□□□□□ -0.93
BRCA1-226ENST00000591534 TUBB3Q13509 450 aa9.24□□□□□ -0.93
BRCA1-226ENST00000591534 DNASE1L3Q13609 305 aa9.24□□□□□ -0.93
BRCA1-226ENST00000591534 GALNT3Q14435 633 aa9.24□□□□□ -0.93
BRCA1-226ENST00000591534 IHHQ14623 411 aa9.24□□□□□ -0.93
BRCA1-226ENST00000591534 PLA2G4EQ3MJ16 856 aa9.24□□□□□ -0.93
BRCA1-226ENST00000591534 TMTC4Q5T4D3 741 aa9.24□□□□□ -0.93
BRCA1-226ENST00000591534 LCE2CQ5TA81 110 aa9.24□□□□□ -0.93
BRCA1-226ENST00000591534 SEL1L2Q5TEA6 688 aa9.24□□□□□ -0.93
BRCA1-226ENST00000591534 PAPD7Q5XG87 772 aaKnown RBP9.24□□□□□ -0.93
BRCA1-226ENST00000591534 ARMC6Q6NXE6 501 aa9.24□□□□□ -0.93
BRCA1-226ENST00000591534 AMZ2Q86W34 360 aa9.24□□□□□ -0.93
BRCA1-226ENST00000591534 APLFQ8IW19 511 aaPredicted RBP9.24□□□□□ -0.93
BRCA1-226ENST00000591534 RHOT1Q8IXI2 618 aa9.24□□□□□ -0.93
BRCA1-226ENST00000591534 SIDT2Q8NBJ9 832 aaKnown RBP9.24□□□□□ -0.93
BRCA1-226ENST00000591534 GPR26Q8NDV2 337 aa9.24□□□□□ -0.93
BRCA1-226ENST00000591534 OR8K5Q8NH50 307 aa9.24□□□□□ -0.93
BRCA1-226ENST00000591534 DTX3LQ8TDB6 740 aa9.24□□□□□ -0.93
BRCA1-226ENST00000591534 MIB2Q96AX9 1013 aa9.24□□□□□ -0.93
BRCA1-226ENST00000591534 IMP4Q96G21 291 aaKnown RBP9.24□□□□□ -0.93
BRCA1-226ENST00000591534 RBM41Q96IZ5 413 aaKnown RBP9.24□□□□□ -0.93
BRCA1-226ENST00000591534 ELMO2Q96JJ3 720 aa9.24□□□□□ -0.93
BRCA1-226ENST00000591534 RNF157Q96PX1 679 aa9.24□□□□□ -0.93
BRCA1-226ENST00000591534 CD180Q99467 661 aa9.24□□□□□ -0.93
BRCA1-226ENST00000591534 FERMT1Q9BQL6 677 aa9.24□□□□□ -0.93
BRCA1-226ENST00000591534 TRIM56Q9BRZ2 755 aaKnown RBP9.24□□□□□ -0.93
BRCA1-226ENST00000591534 LACRTQ9GZZ8 138 aa9.24□□□□□ -0.93
BRCA1-226ENST00000591534 GOLPH3Q9H4A6 298 aa9.24□□□□□ -0.93
BRCA1-226ENST00000591534 TRABDQ9H4I3 376 aa9.24□□□□□ -0.93
BRCA1-226ENST00000591534 LHX9Q9NQ69 397 aa9.24□□□□□ -0.93
BRCA1-226ENST00000591534 ZNF624Q9P2J8 865 aaPredicted RBP9.24□□□□□ -0.93
BRCA1-226ENST00000591534 CDC23Q9UJX2 597 aa9.24□□□□□ -0.93
BRCA1-226ENST00000591534 SHOC2Q9UQ13 582 aa9.24□□□□□ -0.93
BRCA1-226ENST00000591534 PLAAQ9Y263 795 aa9.24□□□□□ -0.93
BRCA1-226ENST00000591534 ZNF711Q9Y462 761 aa9.24□□□□□ -0.93
BRCA1-226ENST00000591534 HEY1Q9Y5J3 304 aa9.24□□□□□ -0.93
BRCA1-226ENST00000591534 PCYT1BQ9Y5K3 369 aaPredicted RBP9.24□□□□□ -0.93
BRCA1-226ENST00000591534 MRPS18BQ9Y676 258 aaKnown RBP9.24□□□□□ -0.93
BRCA1-226ENST00000591534 SDK2Q58EX2 2172 aa9.24□□□□□ -0.93
BRCA1-226ENST00000591534 ARHGEF17Q96PE2 2063 aaPredicted RBP9.24□□□□□ -0.93
BRCA1-226ENST00000591534 UBA6A0AVT1 1052 aaPredicted RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms