RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 LHX9Q9NQ69 397 aa10.16□□□□□ -0.78
VPS4B-207ENST00000591519 AMFRQ9UKV5 643 aa10.16□□□□□ -0.78
VPS4B-207ENST00000591519 RARRES3Q9UL19 164 aa10.16□□□□□ -0.78
VPS4B-207ENST00000591519 POLHQ9Y253 713 aa10.16□□□□□ -0.78
VPS4B-207ENST00000591519 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.16□□□□□ -0.78
VPS4B-207ENST00000591519 CAPN6Q9Y6Q1 641 aa10.16□□□□□ -0.78
VPS4B-207ENST00000591519 NBASA2RRP1 2371 aa10.15□□□□□ -0.78
VPS4B-207ENST00000591519 OR5K3A6NET4 321 aa10.15□□□□□ -0.78
VPS4B-207ENST00000591519 OR2AG2A6NM03 316 aa10.15□□□□□ -0.78
VPS4B-207ENST00000591519 C2orf81A6NN90 581 aa10.15□□□□□ -0.78
VPS4B-207ENST00000591519 MKRN2OSH3BPM6 223 aa10.15□□□□□ -0.78
VPS4B-207ENST00000591519 APOC4-APOC2K7ER74 178 aa10.15□□□□□ -0.78
VPS4B-207ENST00000591519 STX7O15400 261 aaKnown RBP10.15□□□□□ -0.78
VPS4B-207ENST00000591519 GPR39O43194 453 aa10.15□□□□□ -0.78
VPS4B-207ENST00000591519 BUD23O43709 281 aaKnown RBP10.15□□□□□ -0.78
VPS4B-207ENST00000591519 SGTAO43765 313 aa10.15□□□□□ -0.78
VPS4B-207ENST00000591519 NRDCO43847 1150 aa10.15□□□□□ -0.78
VPS4B-207ENST00000591519 KATNA1O75449 491 aa10.15□□□□□ -0.78
VPS4B-207ENST00000591519 TIAF1O95411 115 aa10.15□□□□□ -0.78
VPS4B-207ENST00000591519 APOC2P02655 101 aa10.15□□□□□ -0.78
VPS4B-207ENST00000591519 PYGMP11217 842 aa10.15□□□□□ -0.78
VPS4B-207ENST00000591519 MSH3P20585 1137 aa10.15□□□□□ -0.78
VPS4B-207ENST00000591519 LPOP22079 712 aaPredicted RBP10.15□□□□□ -0.78
VPS4B-207ENST00000591519 ADRA1AP35348 466 aa10.15□□□□□ -0.78
VPS4B-207ENST00000591519 GEMP55040 296 aa10.15□□□□□ -0.78
VPS4B-207ENST00000591519 PPP1CAP62136 330 aa10.15□□□□□ -0.78
VPS4B-207ENST00000591519 HSD11B2P80365 405 aa10.15□□□□□ -0.78
VPS4B-207ENST00000591519 XIAPP98170 497 aa10.15□□□□□ -0.78
VPS4B-207ENST00000591519 KLRB1Q12918 225 aa10.15□□□□□ -0.78
VPS4B-207ENST00000591519 DNASE1L3Q13609 305 aa10.15□□□□□ -0.78
VPS4B-207ENST00000591519 LAMB3Q13751 1172 aa10.15□□□□□ -0.78
VPS4B-207ENST00000591519 UBAP2LQ14157 1087 aaKnown RBP10.15□□□□□ -0.78
VPS4B-207ENST00000591519 PTPRCAPQ14761 206 aa10.15□□□□□ -0.78
VPS4B-207ENST00000591519 BCL7AQ4VC05 210 aa10.15□□□□□ -0.78
VPS4B-207ENST00000591519 CCDC181Q5TID7 509 aa10.15□□□□□ -0.78
VPS4B-207ENST00000591519 CAPRIN2Q6IMN6 1127 aaKnown RBP10.15□□□□□ -0.78
VPS4B-207ENST00000591519 ZNF517Q6ZMY9 492 aaPredicted RBP10.15□□□□□ -0.78
VPS4B-207ENST00000591519 VASH1Q7L8A9 365 aaPredicted RBP10.15□□□□□ -0.78
VPS4B-207ENST00000591519 LRRC57Q8N9N7 239 aa10.15□□□□□ -0.78
VPS4B-207ENST00000591519 SIDT2Q8NBJ9 832 aaKnown RBP10.15□□□□□ -0.78
VPS4B-207ENST00000591519 IPMKQ8NFU5 416 aa10.15□□□□□ -0.78
VPS4B-207ENST00000591519 GPR150Q8NGU9 434 aa10.15□□□□□ -0.78
VPS4B-207ENST00000591519 OR8K5Q8NH50 307 aa10.15□□□□□ -0.78
VPS4B-207ENST00000591519 ANP32BQ92688 251 aaKnown RBP10.15□□□□□ -0.78
VPS4B-207ENST00000591519 RBM41Q96IZ5 413 aaKnown RBP10.15□□□□□ -0.78
VPS4B-207ENST00000591519 ELMO2Q96JJ3 720 aa10.15□□□□□ -0.78
VPS4B-207ENST00000591519 CALR3Q96L12 384 aaKnown RBP10.15□□□□□ -0.78
VPS4B-207ENST00000591519 MAP3K3Q99759 626 aa10.15□□□□□ -0.78
VPS4B-207ENST00000591519 GORASP1Q9BQQ3 440 aa10.15□□□□□ -0.78
VPS4B-207ENST00000591519 FSD1LQ9BXM9 530 aa10.15□□□□□ -0.78
VPS4B-207ENST00000591519 GBA3Q9H227 469 aa10.15□□□□□ -0.78
VPS4B-207ENST00000591519 KIR3DX1Q9H7L2 352 aa10.15□□□□□ -0.78
VPS4B-207ENST00000591519 ARNT2Q9HBZ2 717 aa10.15□□□□□ -0.78
VPS4B-207ENST00000591519 FGF21Q9NSA1 209 aa10.15□□□□□ -0.78
VPS4B-207ENST00000591519 HRASLS2Q9NWW9 162 aa10.15□□□□□ -0.78
VPS4B-207ENST00000591519 RSPH14Q9UHP6 348 aa10.15□□□□□ -0.78
VPS4B-207ENST00000591519 SLC24A2Q9UI40 661 aa10.15□□□□□ -0.78
VPS4B-207ENST00000591519 LNPEPQ9UIQ6 1025 aa10.15□□□□□ -0.78
VPS4B-207ENST00000591519 PSMD13Q9UNM6 376 aa10.15□□□□□ -0.78
VPS4B-207ENST00000591519 AAR2Q9Y312 384 aaKnown RBP10.15□□□□□ -0.78
VPS4B-207ENST00000591519 FLNCQ14315 2725 aa10.15□□□□□ -0.78
VPS4B-207ENST00000591519 MAST4O15021 2626 aa10.15□□□□□ -0.79
VPS4B-207ENST00000591519 PTPN13Q12923 2485 aa10.14□□□□□ -0.79
VPS4B-207ENST00000591519 C17orf113A0A1B0GUU1 675 aa10.14□□□□□ -0.79
VPS4B-207ENST00000591519 PIPSLA2A3N6 862 aa10.14□□□□□ -0.79
VPS4B-207ENST00000591519 TLCD2A6NGC4 264 aa10.14□□□□□ -0.79
VPS4B-207ENST00000591519 F5H423 210 aaPredicted RBP10.14□□□□□ -0.79
VPS4B-207ENST00000591519 KRT86O43790 486 aa10.14□□□□□ -0.79
VPS4B-207ENST00000591519 SRP72O76094 671 aaKnown RBP10.14□□□□□ -0.79
VPS4B-207ENST00000591519 PRAMEF1O95521 474 aa10.14□□□□□ -0.79
VPS4B-207ENST00000591519 CCDC175P0C221 793 aa10.14□□□□□ -0.79
VPS4B-207ENST00000591519 RBL1P28749 1068 aa10.14□□□□□ -0.79
VPS4B-207ENST00000591519 PTPN4P29074 926 aa10.14□□□□□ -0.79
VPS4B-207ENST00000591519 CTNNA1P35221 906 aaKnown RBP10.14□□□□□ -0.79
VPS4B-207ENST00000591519 CD97P48960 835 aa10.14□□□□□ -0.79
VPS4B-207ENST00000591519 PMS2P54278 862 aa10.14□□□□□ -0.79
VPS4B-207ENST00000591519 RWDD2BP57060 319 aa10.14□□□□□ -0.79
VPS4B-207ENST00000591519 TUBB4BP68371 445 aa10.14□□□□□ -0.79
VPS4B-207ENST00000591519 TUBB3Q13509 450 aa10.14□□□□□ -0.79
VPS4B-207ENST00000591519 SEMA5AQ13591 1074 aa10.14□□□□□ -0.79
VPS4B-207ENST00000591519 TUBB2AQ13885 445 aa10.14□□□□□ -0.79
VPS4B-207ENST00000591519 IGFBP7Q16270 282 aa10.14□□□□□ -0.79
VPS4B-207ENST00000591519 FNBP1LQ5T0N5 605 aa10.14□□□□□ -0.79
VPS4B-207ENST00000591519 KLHDC8BQ8IXV7 354 aa10.14□□□□□ -0.79
VPS4B-207ENST00000591519 SYCE1Q8N0S2 351 aa10.14□□□□□ -0.79
VPS4B-207ENST00000591519 OR4K2Q8NGD2 314 aa10.14□□□□□ -0.79
VPS4B-207ENST00000591519 CT55Q8WUE5 264 aa10.14□□□□□ -0.79
VPS4B-207ENST00000591519 HEXDCQ8WVB3 486 aa10.14□□□□□ -0.79
VPS4B-207ENST00000591519 THAP4Q8WY91 577 aa10.14□□□□□ -0.79
VPS4B-207ENST00000591519 ALG3Q92685 438 aa10.14□□□□□ -0.79
VPS4B-207ENST00000591519 ZNF501Q96CX3 271 aaPredicted RBP10.14□□□□□ -0.79
VPS4B-207ENST00000591519 LRFN5Q96NI6 719 aa10.14□□□□□ -0.79
VPS4B-207ENST00000591519 FAM118BQ9BPY3 351 aa10.14□□□□□ -0.79
VPS4B-207ENST00000591519 CCM2Q9BSQ5 444 aa10.14□□□□□ -0.79
VPS4B-207ENST00000591519 TUBB2BQ9BVA1 445 aa10.14□□□□□ -0.79
VPS4B-207ENST00000591519 TSGA10Q9BZW7 698 aa10.14□□□□□ -0.79
VPS4B-207ENST00000591519 WWP1Q9H0M0 922 aa10.14□□□□□ -0.79
VPS4B-207ENST00000591519 ASB8Q9H765 288 aa10.14□□□□□ -0.79
VPS4B-207ENST00000591519 C10orf88Q9H8K7 445 aa10.14□□□□□ -0.79
VPS4B-207ENST00000591519 AKIRIN1Q9H9L7 192 aaPredicted RBP10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms