RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 SMU1Q2TAY7 513 aa7.29□□□□□ -1.24
ZNF540-206ENST00000589117 GPR33Q49SQ1 333 aa7.29□□□□□ -1.24
ZNF540-206ENST00000589117 SETMARQ53H47 684 aaPredicted RBP7.29□□□□□ -1.24
ZNF540-206ENST00000589117 XKR7Q5GH72 579 aa7.29□□□□□ -1.24
ZNF540-206ENST00000589117 MTX3Q5HYI7 312 aa7.29□□□□□ -1.24
ZNF540-206ENST00000589117 C6orf136Q5SQH8 315 aa7.29□□□□□ -1.24
ZNF540-206ENST00000589117 CXorf57Q6NSI4 855 aaKnown RBP7.29□□□□□ -1.24
ZNF540-206ENST00000589117 BORAQ6PGQ7 559 aa7.29□□□□□ -1.24
ZNF540-206ENST00000589117 B3GNT6Q6ZMB0 384 aa7.29□□□□□ -1.24
ZNF540-206ENST00000589117 SPATC1Q76KD6 591 aa7.29□□□□□ -1.24
ZNF540-206ENST00000589117 KIAA0907Q7Z7F0 614 aaPredicted RBP7.29□□□□□ -1.24
ZNF540-206ENST00000589117 AMIGO2Q86SJ2 522 aa7.29□□□□□ -1.24
ZNF540-206ENST00000589117 SYVN1Q86TM6 617 aa7.29□□□□□ -1.24
ZNF540-206ENST00000589117 PTRH1Q86Y79 214 aaKnown RBP7.29□□□□□ -1.24
ZNF540-206ENST00000589117 HID1Q8IV36 788 aa7.29□□□□□ -1.24
ZNF540-206ENST00000589117 FAM126BQ8IXS8 530 aa7.29□□□□□ -1.24
ZNF540-206ENST00000589117 CPNE9Q8IYJ1 553 aa7.29□□□□□ -1.24
ZNF540-206ENST00000589117 FAM9CQ8IZT9 166 aa7.29□□□□□ -1.24
ZNF540-206ENST00000589117 TTC30BQ8N4P2 665 aa7.29□□□□□ -1.24
ZNF540-206ENST00000589117 CDYL2Q8N8U2 506 aa7.29□□□□□ -1.24
ZNF540-206ENST00000589117 DCAF4L2Q8NA75 395 aa7.29□□□□□ -1.24
ZNF540-206ENST00000589117 OR13H1Q8NG92 308 aa7.29□□□□□ -1.24
ZNF540-206ENST00000589117 DNAJB14Q8TBM8 379 aa7.29□□□□□ -1.24
ZNF540-206ENST00000589117 HM13Q8TCT9 377 aa7.29□□□□□ -1.24
ZNF540-206ENST00000589117 CD99L2Q8TCZ2 262 aa7.29□□□□□ -1.24
ZNF540-206ENST00000589117 SLCO4A1Q96BD0 722 aa7.29□□□□□ -1.24
ZNF540-206ENST00000589117 RMND5BQ96G75 393 aaPredicted RBP7.29□□□□□ -1.24
ZNF540-206ENST00000589117 SH3GL1Q99961 368 aa7.29□□□□□ -1.24
ZNF540-206ENST00000589117 BDH2Q9BUT1 245 aa7.29□□□□□ -1.24
ZNF540-206ENST00000589117 LRRC3Q9BY71 257 aa7.29□□□□□ -1.24
ZNF540-206ENST00000589117 CLK4Q9HAZ1 481 aaKnown RBP7.29□□□□□ -1.24
ZNF540-206ENST00000589117 PIDD1Q9HB75 910 aa7.29□□□□□ -1.24
ZNF540-206ENST00000589117 TIMMDC1Q9NPL8 285 aa7.29□□□□□ -1.24
ZNF540-206ENST00000589117 PTTG2Q9NZH5 202 aa7.29□□□□□ -1.24
ZNF540-206ENST00000589117 PFDN2Q9UHV9 154 aa7.29□□□□□ -1.24
ZNF540-206ENST00000589117 PTBP2Q9UKA9 531 aaKnown RBP7.29□□□□□ -1.24
ZNF540-206ENST00000589117 SLC8A2Q9UPR5 921 aa7.29□□□□□ -1.24
ZNF540-206ENST00000589117 EIF3LQ9Y262 564 aaKnown RBP7.29□□□□□ -1.24
ZNF540-206ENST00000589117 PCDHA9Q9Y5H5 950 aa7.29□□□□□ -1.24
ZNF540-206ENST00000589117 ACTL7AQ9Y615 435 aa7.29□□□□□ -1.24
ZNF540-206ENST00000589117 GPC6Q9Y625 555 aaPredicted RBP7.29□□□□□ -1.24
ZNF540-206ENST00000589117 BPTFQ12830 3046 aa7.28□□□□□ -1.24
ZNF540-206ENST00000589117 INPP4BO15327 924 aa7.28□□□□□ -1.24
ZNF540-206ENST00000589117 FFAR2O15552 330 aa7.28□□□□□ -1.24
ZNF540-206ENST00000589117 RGS14O43566 566 aa7.28□□□□□ -1.24
ZNF540-206ENST00000589117 SOCS5O75159 536 aa7.28□□□□□ -1.24
ZNF540-206ENST00000589117 PGLSO95336 258 aa7.28□□□□□ -1.24
ZNF540-206ENST00000589117 TSPAN12O95859 305 aa7.28□□□□□ -1.24
ZNF540-206ENST00000589117 SOD2P04179 222 aa7.28□□□□□ -1.24
ZNF540-206ENST00000589117 TFAP2AP05549 437 aa7.28□□□□□ -1.24
ZNF540-206ENST00000589117 THBS1P07996 1170 aa7.28□□□□□ -1.24
ZNF540-206ENST00000589117 ENO2P09104 434 aaPredicted RBP7.28□□□□□ -1.24
ZNF540-206ENST00000589117 EPB42P16452 691 aa7.28□□□□□ -1.24
ZNF540-206ENST00000589117 HOXB6P17509 224 aaKnown RBP7.28□□□□□ -1.24
ZNF540-206ENST00000589117 RPL17P18621 184 aaKnown RBP7.28□□□□□ -1.24
ZNF540-206ENST00000589117 CSNK1DP48730 415 aa7.28□□□□□ -1.24
ZNF540-206ENST00000589117 CDKN1CP49918 316 aaPredicted RBP7.28□□□□□ -1.24
ZNF540-206ENST00000589117 AGTR2P50052 363 aa7.28□□□□□ -1.24
ZNF540-206ENST00000589117 CLCN7P51798 805 aa7.28□□□□□ -1.24
ZNF540-206ENST00000589117 PRKCQQ04759 706 aa7.28□□□□□ -1.24
ZNF540-206ENST00000589117 LIPEQ05469 1076 aa7.28□□□□□ -1.24
ZNF540-206ENST00000589117 TRAF2Q12933 501 aa7.28□□□□□ -1.24
ZNF540-206ENST00000589117 PLD1Q13393 1074 aa7.28□□□□□ -1.24
ZNF540-206ENST00000589117 C21orf62-AS1Q17RA5 79 aa7.28□□□□□ -1.24
ZNF540-206ENST00000589117 CTSL3PQ5NE16 218 aa7.28□□□□□ -1.24
ZNF540-206ENST00000589117 AP1ARQ63HQ0 302 aa7.28□□□□□ -1.24
ZNF540-206ENST00000589117 GRAMD4Q6IC98 578 aa7.28□□□□□ -1.24
ZNF540-206ENST00000589117 TTC23LQ6PF05 361 aa7.28□□□□□ -1.24
ZNF540-206ENST00000589117 IL27RAQ6UWB1 636 aa7.28□□□□□ -1.24
ZNF540-206ENST00000589117 LINGO4Q6UY18 593 aa7.28□□□□□ -1.24
ZNF540-206ENST00000589117 SNX20Q7Z614 316 aa7.28□□□□□ -1.24
ZNF540-206ENST00000589117 MILR1Q7Z6M3 343 aa7.28□□□□□ -1.24
ZNF540-206ENST00000589117 DNAJB7Q7Z6W7 309 aaPredicted RBP7.28□□□□□ -1.24
ZNF540-206ENST00000589117 TMEM173Q86WV6 379 aaPredicted RBP7.28□□□□□ -1.24
ZNF540-206ENST00000589117 GALNT13Q8IUC8 556 aa7.28□□□□□ -1.24
ZNF540-206ENST00000589117 CRIPAKQ8N1N5 446 aa7.28□□□□□ -1.24
ZNF540-206ENST00000589117 SNX31Q8N9S9 440 aa7.28□□□□□ -1.24
ZNF540-206ENST00000589117 MFSD2AQ8NA29 543 aa7.28□□□□□ -1.24
ZNF540-206ENST00000589117 LEMD2Q8NC56 503 aa7.28□□□□□ -1.24
ZNF540-206ENST00000589117 OSCP1Q8WVF1 389 aa7.28□□□□□ -1.24
ZNF540-206ENST00000589117 DTNBP1Q96EV8 351 aa7.28□□□□□ -1.24
ZNF540-206ENST00000589117 NECAB3Q96P71 396 aaPredicted RBP7.28□□□□□ -1.24
ZNF540-206ENST00000589117 CLSTN3Q9BQT9 956 aa7.28□□□□□ -1.24
ZNF540-206ENST00000589117 ANKRD60Q9BZ19 345 aa7.28□□□□□ -1.24
ZNF540-206ENST00000589117 CIPCQ9C0C6 399 aa7.28□□□□□ -1.24
ZNF540-206ENST00000589117 RNF38Q9H0F5 515 aa7.28□□□□□ -1.24
ZNF540-206ENST00000589117 ASB8Q9H765 288 aa7.28□□□□□ -1.24
ZNF540-206ENST00000589117 ATP13A3Q9H7F0 1226 aa7.28□□□□□ -1.24
ZNF540-206ENST00000589117 CD320Q9NPF0 282 aa7.28□□□□□ -1.24
ZNF540-206ENST00000589117 EIF2B4Q9UI10 523 aaKnown RBP7.28□□□□□ -1.24
ZNF540-206ENST00000589117 MAGEL2Q9UJ55 1249 aa7.28□□□□□ -1.24
ZNF540-206ENST00000589117 ANAPC2Q9UJX6 822 aa7.28□□□□□ -1.24
ZNF540-206ENST00000589117 YIPF1Q9Y548 306 aa7.28□□□□□ -1.24
ZNF540-206ENST00000589117 PTGDR2Q9Y5Y4 395 aa7.28□□□□□ -1.24
ZNF540-206ENST00000589117 THSD7BQ9C0I4 1608 aa7.28□□□□□ -1.24
ZNF540-206ENST00000589117 SLC28A1O00337 649 aa7.28□□□□□ -1.24
ZNF540-206ENST00000589117 ARPC2O15144 300 aa7.28□□□□□ -1.24
ZNF540-206ENST00000589117 ADAM12O43184 909 aa7.28□□□□□ -1.24
ZNF540-206ENST00000589117 HTRA2O43464 458 aaPredicted RBP7.28□□□□□ -1.24
ZNF540-206ENST00000589117 SNAP91O60641 907 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms