RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 FREM2Q5SZK8 3169 aa19.74■□□□□ 0.75
DDX39A-207ENST00000588542 PFDN6O15212 129 aa19.73■□□□□ 0.75
DDX39A-207ENST00000588542 GPC4O75487 556 aa19.73■□□□□ 0.75
DDX39A-207ENST00000588542 HOXB3P14651 431 aaPredicted RBP19.73■□□□□ 0.75
DDX39A-207ENST00000588542 AOAHP28039 575 aa19.73■□□□□ 0.75
DDX39A-207ENST00000588542 CD151P48509 253 aa19.73■□□□□ 0.75
DDX39A-207ENST00000588542 CAV1Q03135 178 aa19.73■□□□□ 0.75
DDX39A-207ENST00000588542 ZFP36L1Q07352 338 aaKnown RBP19.73■□□□□ 0.75
DDX39A-207ENST00000588542 BOP1Q14137 746 aaKnown RBP19.73■□□□□ 0.75
DDX39A-207ENST00000588542 CLPPQ16740 277 aaPredicted RBP19.73■□□□□ 0.75
DDX39A-207ENST00000588542 TRMT10BQ6PF06 316 aaKnown RBP19.73■□□□□ 0.75
DDX39A-207ENST00000588542 PIM3Q86V86 326 aa19.73■□□□□ 0.75
DDX39A-207ENST00000588542 SLITRK4Q8IW52 837 aa19.73■□□□□ 0.75
DDX39A-207ENST00000588542 CERS2Q96G23 380 aa19.73■□□□□ 0.75
DDX39A-207ENST00000588542 FAM167BQ9BTA0 163 aa19.73■□□□□ 0.75
DDX39A-207ENST00000588542 FOXP3Q9BZS1 431 aa19.73■□□□□ 0.75
DDX39A-207ENST00000588542 FBXO5Q9UKT4 447 aa19.73■□□□□ 0.75
DDX39A-207ENST00000588542 A0A1W2PNU3 283 aaPredicted RBP19.72■□□□□ 0.75
DDX39A-207ENST00000588542 TRABD2BA6NFA1 517 aa19.72■□□□□ 0.75
DDX39A-207ENST00000588542 EIF3HO15372 352 aaKnown RBP eCLIP19.72■□□□□ 0.75
DDX39A-207ENST00000588542 NIPSNAP2O75323 286 aa19.72■□□□□ 0.75
DDX39A-207ENST00000588542 ESR1P03372 595 aa19.72■□□□□ 0.75
DDX39A-207ENST00000588542 ACADLP28330 430 aa19.72■□□□□ 0.75
DDX39A-207ENST00000588542 CSE1LP55060 971 aaKnown RBP19.72■□□□□ 0.75
DDX39A-207ENST00000588542 MPP1Q00013 466 aa19.72■□□□□ 0.75
DDX39A-207ENST00000588542 GUCY2DQ02846 1103 aa19.72■□□□□ 0.75
DDX39A-207ENST00000588542 FRG1Q14331 258 aaKnown RBP19.72■□□□□ 0.75
DDX39A-207ENST00000588542 MAP9Q49MG5 647 aa19.72■□□□□ 0.75
DDX39A-207ENST00000588542 ZNF549Q6P9A3 640 aa19.72■□□□□ 0.75
DDX39A-207ENST00000588542 ZNF449Q6P9G9 518 aa19.72■□□□□ 0.75
DDX39A-207ENST00000588542 PDZD3Q86UT5 571 aa19.72■□□□□ 0.75
DDX39A-207ENST00000588542 VRK3Q8IV63 474 aa19.72■□□□□ 0.75
DDX39A-207ENST00000588542 CNTN4Q8IWV2 1026 aa19.72■□□□□ 0.75
DDX39A-207ENST00000588542 ZBED8Q8IZ13 594 aa19.72■□□□□ 0.75
DDX39A-207ENST00000588542 CEP112Q8N8E3 955 aa19.72■□□□□ 0.75
DDX39A-207ENST00000588542 C2CD4AQ8NCU7 369 aaPredicted RBP19.72■□□□□ 0.75
DDX39A-207ENST00000588542 OR10G6Q8NH81 332 aa19.72■□□□□ 0.75
DDX39A-207ENST00000588542 ATXN7L3BQ96GX2 97 aa19.72■□□□□ 0.75
DDX39A-207ENST00000588542 TSSK1BQ9BXA7 367 aa19.72■□□□□ 0.75
DDX39A-207ENST00000588542 SEMA6CQ9H3T2 930 aa19.72■□□□□ 0.75
DDX39A-207ENST00000588542 SAYSD1Q9NPB0 183 aa19.72■□□□□ 0.75
DDX39A-207ENST00000588542 ZDHHC18Q9NUE0 388 aa19.72■□□□□ 0.75
DDX39A-207ENST00000588542 TMEM9Q9P0T7 183 aa19.72■□□□□ 0.75
DDX39A-207ENST00000588542 VPS9D1Q9Y2B5 631 aa19.72■□□□□ 0.75
DDX39A-207ENST00000588542 DUX1O43812 170 aa19.71■□□□□ 0.75
DDX39A-207ENST00000588542 HAUS5O94927 633 aa19.71■□□□□ 0.75
DDX39A-207ENST00000588542 PKMP14618 531 aaKnown RBP19.71■□□□□ 0.75
DDX39A-207ENST00000588542 CCKBRP32239 447 aa19.71■□□□□ 0.75
DDX39A-207ENST00000588542 LEPRP48357 1165 aaKnown RBP19.71■□□□□ 0.75
DDX39A-207ENST00000588542 INHBCP55103 352 aa19.71■□□□□ 0.75
DDX39A-207ENST00000588542 PLOD1Q02809 727 aaPredicted RBP19.71■□□□□ 0.75
DDX39A-207ENST00000588542 SYTL3Q4VX76 610 aa19.71■□□□□ 0.75
DDX39A-207ENST00000588542 TEDDM1Q5T9Z0 273 aa19.71■□□□□ 0.75
DDX39A-207ENST00000588542 SLC22A15Q8IZD6 547 aa19.71■□□□□ 0.75
DDX39A-207ENST00000588542 ZFPM2Q8WW38 1151 aa19.71■□□□□ 0.75
DDX39A-207ENST00000588542 ASZ1Q8WWH4 475 aa19.71■□□□□ 0.75
DDX39A-207ENST00000588542 JPH3Q8WXH2 748 aaPredicted RBP19.71■□□□□ 0.75
DDX39A-207ENST00000588542 TMEM159Q96B96 161 aa19.71■□□□□ 0.75
DDX39A-207ENST00000588542 GRAMD1AQ96CP6 724 aa19.71■□□□□ 0.75
DDX39A-207ENST00000588542 AHCYL2Q96HN2 611 aaKnown RBP19.71■□□□□ 0.75
DDX39A-207ENST00000588542 TMEM74Q96NL1 305 aa19.71■□□□□ 0.75
DDX39A-207ENST00000588542 PANX3Q96QZ0 392 aa19.71■□□□□ 0.75
DDX39A-207ENST00000588542 PHACTR1Q9C0D0 580 aa19.71■□□□□ 0.75
DDX39A-207ENST00000588542 EPB41L1Q9H4G0 881 aa19.71■□□□□ 0.75
DDX39A-207ENST00000588542 SLC17A6Q9P2U8 582 aa19.71■□□□□ 0.75
DDX39A-207ENST00000588542 GALPQ9UBC7 116 aa19.71■□□□□ 0.75
DDX39A-207ENST00000588542 HEBP2Q9Y5Z4 205 aa19.71■□□□□ 0.75
DDX39A-207ENST00000588542 IGHV5-10-1A0A0J9YXX1 117 aa19.7■□□□□ 0.74
DDX39A-207ENST00000588542 H3BMM5 538 aa19.7■□□□□ 0.74
DDX39A-207ENST00000588542 IFRD1O00458 451 aaPredicted RBP19.7■□□□□ 0.74
DDX39A-207ENST00000588542 UBXN7O94888 489 aa19.7■□□□□ 0.74
DDX39A-207ENST00000588542 SLCO2B1O94956 709 aa19.7■□□□□ 0.74
DDX39A-207ENST00000588542 PROS1P07225 676 aa19.7■□□□□ 0.74
DDX39A-207ENST00000588542 TYRP1P17643 537 aa19.7■□□□□ 0.74
DDX39A-207ENST00000588542 GABRB3P28472 473 aa19.7■□□□□ 0.74
DDX39A-207ENST00000588542 MAPK9P45984 424 aa19.7■□□□□ 0.74
DDX39A-207ENST00000588542 CARSP49589 748 aaKnown RBP19.7■□□□□ 0.74
DDX39A-207ENST00000588542 LIMK2P53671 638 aa19.7■□□□□ 0.74
DDX39A-207ENST00000588542 HSPA14Q0VDF9 509 aa19.7■□□□□ 0.74
DDX39A-207ENST00000588542 GLE1Q53GS7 698 aaKnown RBP19.7■□□□□ 0.74
DDX39A-207ENST00000588542 TMEM71Q6P5X7 295 aa19.7■□□□□ 0.74
DDX39A-207ENST00000588542 CNSTQ6PJW8 725 aa19.7■□□□□ 0.74
DDX39A-207ENST00000588542 WDR74Q6RFH5 385 aaPredicted RBP19.7■□□□□ 0.74
DDX39A-207ENST00000588542 PHC3Q8NDX5 983 aa19.7■□□□□ 0.74
DDX39A-207ENST00000588542 OR4D9Q8NGE8 314 aa19.7■□□□□ 0.74
DDX39A-207ENST00000588542 NCSTNQ92542 709 aa19.7■□□□□ 0.74
DDX39A-207ENST00000588542 TFGQ92734 400 aaPredicted RBP19.7■□□□□ 0.74
DDX39A-207ENST00000588542 LIN37Q96GY3 246 aaPredicted RBP19.7■□□□□ 0.74
DDX39A-207ENST00000588542 DPYSL5Q9BPU6 564 aa19.7■□□□□ 0.74
DDX39A-207ENST00000588542 NRSN2Q9GZP1 204 aa19.7■□□□□ 0.74
DDX39A-207ENST00000588542 KIR3DX1Q9H7L2 352 aa19.7■□□□□ 0.74
DDX39A-207ENST00000588542 LATS2Q9NRM7 1088 aa19.7■□□□□ 0.74
DDX39A-207ENST00000588542 MOCS1Q9NZB8 636 aa19.7■□□□□ 0.74
DDX39A-207ENST00000588542 PDP2Q9P2J9 529 aa19.7■□□□□ 0.74
DDX39A-207ENST00000588542 SLC24A2Q9UI40 661 aa19.7■□□□□ 0.74
DDX39A-207ENST00000588542 MED16Q9Y2X0 877 aa19.7■□□□□ 0.74
DDX39A-207ENST00000588542 COLEC10Q9Y6Z7 277 aa19.7■□□□□ 0.74
DDX39A-207ENST00000588542 ACACBO00763 2458 aa19.7■□□□□ 0.74
DDX39A-207ENST00000588542 IGF2RP11717 2491 aa19.69■□□□□ 0.74
DDX39A-207ENST00000588542 C1QTNF9BB2RNN3 333 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms