RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 MTHFD2P13995 350 aa11.07□□□□□ -0.64
VMP1-207ENST00000588131 TAC1P20366 129 aa11.07□□□□□ -0.64
VMP1-207ENST00000588131 ATP5F1P24539 256 aaPredicted RBP11.07□□□□□ -0.64
VMP1-207ENST00000588131 HTR1BP28222 390 aa11.07□□□□□ -0.64
VMP1-207ENST00000588131 ABRQ12979 859 aa11.07□□□□□ -0.64
VMP1-207ENST00000588131 CHI3L2Q15782 390 aa11.07□□□□□ -0.64
VMP1-207ENST00000588131 PHKG1Q16816 387 aa11.07□□□□□ -0.64
VMP1-207ENST00000588131 PPP1R3AQ16821 1122 aa11.07□□□□□ -0.64
VMP1-207ENST00000588131 ZCCHC23Q6ZST2 131 aa11.07□□□□□ -0.64
VMP1-207ENST00000588131 NEK10Q6ZWH5 1172 aa11.07□□□□□ -0.64
VMP1-207ENST00000588131 BMP8AQ7Z5Y6 402 aa11.07□□□□□ -0.64
VMP1-207ENST00000588131 ADAMTSL2Q86TH1 951 aa11.07□□□□□ -0.64
VMP1-207ENST00000588131 RASGRP3Q8IV61 690 aa11.07□□□□□ -0.64
VMP1-207ENST00000588131 C1orf216Q8TAB5 229 aa11.07□□□□□ -0.64
VMP1-207ENST00000588131 STAG3L4Q8TBR4 150 aa11.07□□□□□ -0.64
VMP1-207ENST00000588131 SKA2Q8WVK7 121 aaPredicted RBP11.07□□□□□ -0.64
VMP1-207ENST00000588131 ZNF75CPQ92670 426 aaPredicted RBP11.07□□□□□ -0.64
VMP1-207ENST00000588131 MOCOSQ96EN8 888 aa11.07□□□□□ -0.64
VMP1-207ENST00000588131 OR2M4Q96R27 311 aa11.07□□□□□ -0.64
VMP1-207ENST00000588131 TIMM29Q9BSF4 260 aa11.07□□□□□ -0.64
VMP1-207ENST00000588131 MIR1-1HGQ9H1L0 117 aa11.07□□□□□ -0.64
VMP1-207ENST00000588131 DUSP15Q9H1R2 295 aaPredicted RBP11.07□□□□□ -0.64
VMP1-207ENST00000588131 MANSC1Q9H8J5 431 aa11.07□□□□□ -0.64
VMP1-207ENST00000588131 TM9SF3Q9HD45 589 aa11.07□□□□□ -0.64
VMP1-207ENST00000588131 ACSS2Q9NR19 701 aa11.07□□□□□ -0.64
VMP1-207ENST00000588131 OXSMQ9NWU1 459 aa11.07□□□□□ -0.64
VMP1-207ENST00000588131 UTP6Q9NYH9 597 aaKnown RBP11.07□□□□□ -0.64
VMP1-207ENST00000588131 KLQ9UEF7 1012 aa11.07□□□□□ -0.64
VMP1-207ENST00000588131 KCNK6Q9Y257 313 aa11.07□□□□□ -0.64
VMP1-207ENST00000588131 GPSM3Q9Y4H4 160 aa11.07□□□□□ -0.64
VMP1-207ENST00000588131 ST14Q9Y5Y6 855 aa11.07□□□□□ -0.64
VMP1-207ENST00000588131 NCF1BA6NI72 391 aaPredicted RBP11.06□□□□□ -0.64
VMP1-207ENST00000588131 PRR19A6NJB7 356 aa11.06□□□□□ -0.64
VMP1-207ENST00000588131 NCF1CA8MVU1 366 aaPredicted RBP11.06□□□□□ -0.64
VMP1-207ENST00000588131 TCP11X1B4DZS4 312 aa11.06□□□□□ -0.64
VMP1-207ENST00000588131 H3BM21 787 aa11.06□□□□□ -0.64
VMP1-207ENST00000588131 TNFRSF10CO14798 259 aa11.06□□□□□ -0.64
VMP1-207ENST00000588131 NEFHP12036 1026 aa11.06□□□□□ -0.64
VMP1-207ENST00000588131 NCF1P14598 390 aaPredicted RBP11.06□□□□□ -0.64
VMP1-207ENST00000588131 CD38P28907 300 aa11.06□□□□□ -0.64
VMP1-207ENST00000588131 SRP54P61011 504 aaKnown RBP11.06□□□□□ -0.64
VMP1-207ENST00000588131 DMPKQ09013 629 aa11.06□□□□□ -0.64
VMP1-207ENST00000588131 EIF2B5Q13144 721 aaKnown RBP11.06□□□□□ -0.64
VMP1-207ENST00000588131 FZD2Q14332 565 aa11.06□□□□□ -0.64
VMP1-207ENST00000588131 TGFBIQ15582 683 aa11.06□□□□□ -0.64
VMP1-207ENST00000588131 RGS9BPQ6ZS82 235 aa11.06□□□□□ -0.64
VMP1-207ENST00000588131 UBE2R2Q712K3 238 aaPredicted RBP11.06□□□□□ -0.64
VMP1-207ENST00000588131 RD3Q7Z3Z2 195 aa11.06□□□□□ -0.64
VMP1-207ENST00000588131 GPSM1Q86YR5 675 aa11.06□□□□□ -0.64
VMP1-207ENST00000588131 OR6Y1Q8NGX8 325 aa11.06□□□□□ -0.64
VMP1-207ENST00000588131 CFAP61Q8NHU2 1237 aa11.06□□□□□ -0.64
VMP1-207ENST00000588131 LRRC8CQ8TDW0 803 aa11.06□□□□□ -0.64
VMP1-207ENST00000588131 GAB3Q8WWW8 586 aa11.06□□□□□ -0.64
VMP1-207ENST00000588131 DNASE2BQ8WZ79 361 aa11.06□□□□□ -0.64
VMP1-207ENST00000588131 KLHDC7BQ96G42 594 aa11.06□□□□□ -0.64
VMP1-207ENST00000588131 GATA5Q9BWX5 397 aaPredicted RBP11.06□□□□□ -0.64
VMP1-207ENST00000588131 OR52A5Q9H2C5 316 aa11.06□□□□□ -0.64
VMP1-207ENST00000588131 TCEAL2Q9H3H9 227 aaPredicted RBP11.06□□□□□ -0.64
VMP1-207ENST00000588131 ZNF395Q9H8N7 513 aaPredicted RBP11.06□□□□□ -0.64
VMP1-207ENST00000588131 KLC4Q9NSK0 619 aa11.06□□□□□ -0.64
VMP1-207ENST00000588131 NCKIPSDQ9NZQ3 722 aa11.06□□□□□ -0.64
VMP1-207ENST00000588131 FBXO4Q9UKT5 387 aa11.06□□□□□ -0.64
VMP1-207ENST00000588131 OARD1Q9Y530 152 aa11.06□□□□□ -0.64
VMP1-207ENST00000588131 TNRC6BQ9UPQ9 1833 aaKnown RBP11.06□□□□□ -0.64
VMP1-207ENST00000588131 TRIOO75962 3097 aa11.06□□□□□ -0.64
VMP1-207ENST00000588131 KMT2EQ8IZD2 1858 aa11.06□□□□□ -0.64
VMP1-207ENST00000588131 ATXN2Q99700 1313 aaKnown RBP11.06□□□□□ -0.64
VMP1-207ENST00000588131 SPTY2D1-AS1A0A0U1RR47 76 aa11.05□□□□□ -0.64
VMP1-207ENST00000588131 CCDC189A1A4V9 331 aa11.05□□□□□ -0.64
VMP1-207ENST00000588131 KRT87PA6NCN2 255 aa11.05□□□□□ -0.64
VMP1-207ENST00000588131 FAM86C2PA6NEL3 165 aa11.05□□□□□ -0.64
VMP1-207ENST00000588131 LRRC14BA6NHZ5 514 aa11.05□□□□□ -0.64
VMP1-207ENST00000588131 SYCE1LA8MT33 242 aa11.05□□□□□ -0.64
VMP1-207ENST00000588131 GFYI3L273 518 aa11.05□□□□□ -0.64
VMP1-207ENST00000588131 SLC16A5O15375 505 aa11.05□□□□□ -0.64
VMP1-207ENST00000588131 HRO43593 1189 aa11.05□□□□□ -0.64
VMP1-207ENST00000588131 KLK8O60259 260 aa11.05□□□□□ -0.64
VMP1-207ENST00000588131 TRIM13O60858 407 aa11.05□□□□□ -0.64
VMP1-207ENST00000588131 SMIM24O75264 130 aa11.05□□□□□ -0.64
VMP1-207ENST00000588131 PSIP1O75475 530 aaKnown RBP11.05□□□□□ -0.64
VMP1-207ENST00000588131 RASGRP1O95267 797 aa11.05□□□□□ -0.64
VMP1-207ENST00000588131 MATN4O95460 622 aa11.05□□□□□ -0.64
VMP1-207ENST00000588131 C8GP07360 202 aa11.05□□□□□ -0.64
VMP1-207ENST00000588131 TPBGLP0DKB5 382 aa11.05□□□□□ -0.64
VMP1-207ENST00000588131 ACADLP28330 430 aa11.05□□□□□ -0.64
VMP1-207ENST00000588131 AVPR2P30518 371 aa11.05□□□□□ -0.64
VMP1-207ENST00000588131 ARRB2P32121 409 aa11.05□□□□□ -0.64
VMP1-207ENST00000588131 BDKRB1P46663 353 aa11.05□□□□□ -0.64
VMP1-207ENST00000588131 SEC24CP53992 1094 aa11.05□□□□□ -0.64
VMP1-207ENST00000588131 PRKAA2P54646 552 aa11.05□□□□□ -0.64
VMP1-207ENST00000588131 RACK1P63244 317 aaKnown RBP11.05□□□□□ -0.64
VMP1-207ENST00000588131 NFKB2Q00653 900 aa11.05□□□□□ -0.64
VMP1-207ENST00000588131 BST1Q10588 318 aa11.05□□□□□ -0.64
VMP1-207ENST00000588131 RPA4Q13156 261 aa11.05□□□□□ -0.64
VMP1-207ENST00000588131 SP140Q13342 867 aa11.05□□□□□ -0.64
VMP1-207ENST00000588131 PTK2BQ14289 1009 aa11.05□□□□□ -0.64
VMP1-207ENST00000588131 TCEA2Q15560 299 aa11.05□□□□□ -0.64
VMP1-207ENST00000588131 PFKFB4Q16877 469 aa11.05□□□□□ -0.64
VMP1-207ENST00000588131 C18orf21Q32NC0 220 aaPredicted RBP11.05□□□□□ -0.64
VMP1-207ENST00000588131 ZNF542PQ5EBM4 170 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms