RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 NR1D2Q14995 579 aa18.74■□□□□ 0.59
DDX39A-204ENST00000586558 CLCA4Q14CN2 919 aa18.74■□□□□ 0.59
DDX39A-204ENST00000586558 TTLL9Q3SXZ7 439 aa18.74■□□□□ 0.59
DDX39A-204ENST00000586558 KBTBD12Q3ZCT8 623 aa18.74■□□□□ 0.59
DDX39A-204ENST00000586558 FAM153CQ494X1 144 aa18.74■□□□□ 0.59
DDX39A-204ENST00000586558 CCNI2Q6ZMN8 369 aaPredicted RBP18.74■□□□□ 0.59
DDX39A-204ENST00000586558 ZC3HC1Q86WB0 502 aaKnown RBP18.74■□□□□ 0.59
DDX39A-204ENST00000586558 CTAGE3PQ8IX95 158 aa18.74■□□□□ 0.59
DDX39A-204ENST00000586558 ZBTB2Q8N680 514 aa18.74■□□□□ 0.59
DDX39A-204ENST00000586558 CCDC74AQ96AQ1 378 aa18.74■□□□□ 0.59
DDX39A-204ENST00000586558 C12orf66Q96MD2 445 aa18.74■□□□□ 0.59
DDX39A-204ENST00000586558 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.74■□□□□ 0.59
DDX39A-204ENST00000586558 RHOJQ9H4E5 214 aa18.74■□□□□ 0.59
DDX39A-204ENST00000586558 ACSS3Q9H6R3 686 aa18.74■□□□□ 0.59
DDX39A-204ENST00000586558 UCK1Q9HA47 277 aa18.74■□□□□ 0.59
DDX39A-204ENST00000586558 TOR4AQ9NXH8 423 aa18.74■□□□□ 0.59
DDX39A-204ENST00000586558 TAS2R13Q9NYV9 303 aa18.74■□□□□ 0.59
DDX39A-204ENST00000586558 ZNF624Q9P2J8 865 aaPredicted RBP18.74■□□□□ 0.59
DDX39A-204ENST00000586558 CDYLQ9Y232 598 aa18.74■□□□□ 0.59
DDX39A-204ENST00000586558 RNF215Q9Y6U7 377 aa18.74■□□□□ 0.59
DDX39A-204ENST00000586558 ZFC3H1O60293 1989 aaKnown RBP18.73■□□□□ 0.59
DDX39A-204ENST00000586558 GOLGA4Q13439 2230 aaKnown RBP18.73■□□□□ 0.59
DDX39A-204ENST00000586558 TRBV23OR9-2A0A075B6M9 112 aa18.73■□□□□ 0.59
DDX39A-204ENST00000586558 CXorf49A8MYA2 514 aaPredicted RBP18.73■□□□□ 0.59
DDX39A-204ENST00000586558 ACSL3O95573 720 aa18.73■□□□□ 0.59
DDX39A-204ENST00000586558 VIPP01282 170 aa18.73■□□□□ 0.59
DDX39A-204ENST00000586558 ABHD2P08910 425 aa18.73■□□□□ 0.59
DDX39A-204ENST00000586558 PDHA2P29803 388 aa18.73■□□□□ 0.59
DDX39A-204ENST00000586558 GP5P40197 560 aa18.73■□□□□ 0.59
DDX39A-204ENST00000586558 SLC19A1P41440 591 aa18.73■□□□□ 0.59
DDX39A-204ENST00000586558 CLCN7P51798 805 aa18.73■□□□□ 0.59
DDX39A-204ENST00000586558 PMS2P54278 862 aa18.73■□□□□ 0.59
DDX39A-204ENST00000586558 E2F1Q01094 437 aa18.73■□□□□ 0.59
DDX39A-204ENST00000586558 GBX1Q14549 363 aa18.73■□□□□ 0.59
DDX39A-204ENST00000586558 BRD3Q15059 726 aa18.73■□□□□ 0.59
DDX39A-204ENST00000586558 FAM45BPQ6NSW5 357 aa18.73■□□□□ 0.59
DDX39A-204ENST00000586558 UGT3A1Q6NUS8 523 aa18.73■□□□□ 0.59
DDX39A-204ENST00000586558 SPDYE1Q8NFV5 336 aaPredicted RBP18.73■□□□□ 0.59
DDX39A-204ENST00000586558 WDR48Q8TAF3 677 aa18.73■□□□□ 0.59
DDX39A-204ENST00000586558 FAM45AQ8TCE6 357 aa18.73■□□□□ 0.59
DDX39A-204ENST00000586558 ZFPM2Q8WW38 1151 aa18.73■□□□□ 0.59
DDX39A-204ENST00000586558 INSM2Q96T92 566 aaPredicted RBP18.73■□□□□ 0.59
DDX39A-204ENST00000586558 MCMBPQ9BTE3 642 aa18.73■□□□□ 0.59
DDX39A-204ENST00000586558 TXLNGYQ9BZA5 131 aa18.73■□□□□ 0.59
DDX39A-204ENST00000586558 SLC40A1Q9NP59 571 aa18.73■□□□□ 0.59
DDX39A-204ENST00000586558 IMP3Q9NV31 184 aaKnown RBP18.73■□□□□ 0.59
DDX39A-204ENST00000586558 MED16Q9Y2X0 877 aa18.73■□□□□ 0.59
DDX39A-204ENST00000586558 ARHGEF17Q96PE2 2063 aaPredicted RBP18.72■□□□□ 0.59
DDX39A-204ENST00000586558 PIKFYVEQ9Y2I7 2098 aa18.72■□□□□ 0.59
DDX39A-204ENST00000586558 LILRA5A6NI73 299 aa18.72■□□□□ 0.59
DDX39A-204ENST00000586558 PCNX2A6NKB5 2137 aa18.72■□□□□ 0.59
DDX39A-204ENST00000586558 PPM1DO15297 605 aa18.72■□□□□ 0.59
DDX39A-204ENST00000586558 VSNL1P62760 191 aa18.72■□□□□ 0.59
DDX39A-204ENST00000586558 ERCC6LQ2NKX8 1250 aa18.72■□□□□ 0.59
DDX39A-204ENST00000586558 PPM1JQ5JR12 505 aa18.72■□□□□ 0.59
DDX39A-204ENST00000586558 PERM1Q5SV97 790 aa18.72■□□□□ 0.59
DDX39A-204ENST00000586558 NAPRTQ6XQN6 538 aa18.72■□□□□ 0.59
DDX39A-204ENST00000586558 GSPT2Q8IYD1 628 aaKnown RBP18.72■□□□□ 0.59
DDX39A-204ENST00000586558 PPM1NQ8N819 430 aa18.72■□□□□ 0.59
DDX39A-204ENST00000586558 GPATCH11Q8N954 259 aa18.72■□□□□ 0.59
DDX39A-204ENST00000586558 TFGQ92734 400 aaPredicted RBP18.72■□□□□ 0.59
DDX39A-204ENST00000586558 INPP5DQ92835 1189 aa18.72■□□□□ 0.59
DDX39A-204ENST00000586558 VPS39Q96JC1 886 aa18.72■□□□□ 0.59
DDX39A-204ENST00000586558 NDNQ99608 321 aa18.72■□□□□ 0.59
DDX39A-204ENST00000586558 CCDC3Q9BQI4 270 aa18.72■□□□□ 0.59
DDX39A-204ENST00000586558 MVB12BQ9H7P6 319 aa18.72■□□□□ 0.59
DDX39A-204ENST00000586558 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.72■□□□□ 0.59
DDX39A-204ENST00000586558 RABGEF1Q9UJ41 708 aa18.72■□□□□ 0.59
DDX39A-204ENST00000586558 TRMT6Q9UJA5 497 aaKnown RBP18.72■□□□□ 0.59
DDX39A-204ENST00000586558 DHRS7Q9Y394 339 aa18.72■□□□□ 0.59
DDX39A-204ENST00000586558 COLEC10Q9Y6Z7 277 aa18.72■□□□□ 0.59
DDX39A-204ENST00000586558 V9GYY5 206 aaPredicted RBP18.72■□□□□ 0.59
DDX39A-204ENST00000586558 DNAH14Q0VDD8 3507 aa18.71■□□□□ 0.59
DDX39A-204ENST00000586558 A0A087WUV0 522 aaPredicted RBP18.71■□□□□ 0.59
DDX39A-204ENST00000586558 EIF3FO00303 357 aaPredicted RBP18.71■□□□□ 0.59
DDX39A-204ENST00000586558 PIAS1O75925 651 aa18.71■□□□□ 0.59
DDX39A-204ENST00000586558 CBSLP0DN79 551 aa18.71■□□□□ 0.59
DDX39A-204ENST00000586558 ENO3P13929 434 aaPredicted RBP18.71■□□□□ 0.59
DDX39A-204ENST00000586558 KCNA4P22459 653 aa18.71■□□□□ 0.59
DDX39A-204ENST00000586558 ACADLP28330 430 aa18.71■□□□□ 0.59
DDX39A-204ENST00000586558 SPRP35270 261 aaPredicted RBP18.71■□□□□ 0.59
DDX39A-204ENST00000586558 CBSP35520 551 aa18.71■□□□□ 0.59
DDX39A-204ENST00000586558 ABCG1P45844 678 aa18.71■□□□□ 0.59
DDX39A-204ENST00000586558 EPHA4P54764 986 aa18.71■□□□□ 0.59
DDX39A-204ENST00000586558 RBM20Q5T481 1227 aaKnown RBP18.71■□□□□ 0.59
DDX39A-204ENST00000586558 GRTP1Q5TC63 336 aa18.71■□□□□ 0.59
DDX39A-204ENST00000586558 SPRED1Q7Z699 444 aa18.71■□□□□ 0.59
DDX39A-204ENST00000586558 SLCO6A1Q86UG4 719 aa18.71■□□□□ 0.59
DDX39A-204ENST00000586558 CD200R1Q8TD46 325 aa18.71■□□□□ 0.59
DDX39A-204ENST00000586558 FAM136AQ96C01 138 aa18.71■□□□□ 0.59
DDX39A-204ENST00000586558 GPR21Q99679 349 aa18.71■□□□□ 0.59
DDX39A-204ENST00000586558 RBBP8Q99708 897 aa18.71■□□□□ 0.59
DDX39A-204ENST00000586558 EPB41L1Q9H4G0 881 aa18.71■□□□□ 0.59
DDX39A-204ENST00000586558 VWA7Q9Y334 891 aa18.71■□□□□ 0.59
DDX39A-204ENST00000586558 FAM95CA0A1B0GW59 222 aa18.7■□□□□ 0.58
DDX39A-204ENST00000586558 RIPK2O43353 540 aa18.7■□□□□ 0.58
DDX39A-204ENST00000586558 OPA1O60313 960 aa18.7■□□□□ 0.58
DDX39A-204ENST00000586558 RPN2P04844 631 aa18.7■□□□□ 0.58
DDX39A-204ENST00000586558 FDXRP22570 491 aa18.7■□□□□ 0.58
DDX39A-204ENST00000586558 MAPK9P45984 424 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms