RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-223	ENST00000584760	AP2A2	O94973	939 aa		12.99	□□□□□ -0.33
SREBF1-223	ENST00000584760	GOT2	P00505	430 aa	Known RBP	12.99	□□□□□ -0.33
SREBF1-223	ENST00000584760	SFTPC	P11686	197 aa		12.99	□□□□□ -0.33
SREBF1-223	ENST00000584760	AMD1	P17707	334 aa		12.99	□□□□□ -0.33
SREBF1-223	ENST00000584760	TPSB2	P20231	275 aa		12.99	□□□□□ -0.33
SREBF1-223	ENST00000584760	NSG1	P42857	185 aa		12.99	□□□□□ -0.33
SREBF1-223	ENST00000584760	MAGEA6	P43360	314 aa		12.99	□□□□□ -0.33
SREBF1-223	ENST00000584760	LEPR	P48357	1165 aa	Known RBP	12.99	□□□□□ -0.33
SREBF1-223	ENST00000584760	RAB15	P59190	212 aa		12.99	□□□□□ -0.33
SREBF1-223	ENST00000584760	PPP1CA	P62136	330 aa		12.99	□□□□□ -0.33
SREBF1-223	ENST00000584760	CRADD	P78560	199 aa		12.99	□□□□□ -0.33
SREBF1-223	ENST00000584760	CDK16	Q00536	496 aa		12.99	□□□□□ -0.33
SREBF1-223	ENST00000584760	KCNJ11	Q14654	390 aa		12.99	□□□□□ -0.33
SREBF1-223	ENST00000584760	TPSAB1	Q15661	275 aa		12.99	□□□□□ -0.33
SREBF1-223	ENST00000584760	MANEA	Q5SRI9	462 aa		12.99	□□□□□ -0.33
SREBF1-223	ENST00000584760	TMEM164	Q5U3C3	297 aa		12.99	□□□□□ -0.33
SREBF1-223	ENST00000584760	ANKS6	Q68DC2	871 aa		12.99	□□□□□ -0.33
SREBF1-223	ENST00000584760	PRSS42	Q7Z5A4	293 aa		12.99	□□□□□ -0.33
SREBF1-223	ENST00000584760	ZSCAN1	Q8NBB4	408 aa		12.99	□□□□□ -0.33
SREBF1-223	ENST00000584760	PPHLN1	Q8NEY8	458 aa	Known RBP	12.99	□□□□□ -0.33
SREBF1-223	ENST00000584760	JPH3	Q8WXH2	748 aa	Predicted RBP	12.99	□□□□□ -0.33
SREBF1-223	ENST00000584760	SGSM3	Q96HU1	749 aa		12.99	□□□□□ -0.33
SREBF1-223	ENST00000584760	OSBPL9	Q96SU4	736 aa		12.99	□□□□□ -0.33
SREBF1-223	ENST00000584760	CCM2	Q9BSQ5	444 aa		12.99	□□□□□ -0.33
SREBF1-223	ENST00000584760	AP1M1	Q9BXS5	423 aa		12.99	□□□□□ -0.33
SREBF1-223	ENST00000584760	RAB33B	Q9H082	229 aa		12.99	□□□□□ -0.33
SREBF1-223	ENST00000584760	OR52A5	Q9H2C5	316 aa		12.99	□□□□□ -0.33
SREBF1-223	ENST00000584760	ZNF768	Q9H5H4	540 aa	Known RBP	12.99	□□□□□ -0.33
SREBF1-223	ENST00000584760	KIR3DX1	Q9H7L2	352 aa		12.99	□□□□□ -0.33
SREBF1-223	ENST00000584760	TREX1	Q9NSU2	369 aa		12.99	□□□□□ -0.33
SREBF1-223	ENST00000584760	TRMT1	Q9NXH9	659 aa	Known RBP	12.99	□□□□□ -0.33
SREBF1-223	ENST00000584760	SLC39A1	Q9NY26	324 aa		12.99	□□□□□ -0.33
SREBF1-223	ENST00000584760	SMARCAL1	Q9NZC9	954 aa		12.99	□□□□□ -0.33
SREBF1-223	ENST00000584760	EPHA6	Q9UF33	1036 aa		12.99	□□□□□ -0.33
SREBF1-223	ENST00000584760	B3GALT1	Q9Y5Z6	326 aa		12.99	□□□□□ -0.33
SREBF1-223	ENST00000584760	PRSS21	Q9Y6M0	314 aa		12.99	□□□□□ -0.33
SREBF1-223	ENST00000584760	TCRBV7S3A2	A0A539	114 aa		12.98	□□□□□ -0.33
SREBF1-223	ENST00000584760	USP27X	A6NNY8	438 aa		12.98	□□□□□ -0.33
SREBF1-223	ENST00000584760	TOX3	O15405	576 aa	Predicted RBP	12.98	□□□□□ -0.33
SREBF1-223	ENST00000584760	KIF5C	O60282	957 aa		12.98	□□□□□ -0.33
SREBF1-223	ENST00000584760	POLB	P06746	335 aa		12.98	□□□□□ -0.33
SREBF1-223	ENST00000584760	GSTM1	P09488	218 aa		12.98	□□□□□ -0.33
SREBF1-223	ENST00000584760	VPS41	P49754	854 aa		12.98	□□□□□ -0.33
SREBF1-223	ENST00000584760	SESN2	P58004	480 aa	Predicted RBP	12.98	□□□□□ -0.33
SREBF1-223	ENST00000584760	MC2R	Q01718	297 aa		12.98	□□□□□ -0.33
SREBF1-223	ENST00000584760	GSTM4	Q03013	218 aa		12.98	□□□□□ -0.33
SREBF1-223	ENST00000584760	TLE1	Q04724	770 aa		12.98	□□□□□ -0.33
SREBF1-223	ENST00000584760	RPA4	Q13156	261 aa		12.98	□□□□□ -0.33
SREBF1-223	ENST00000584760	SEMA3A	Q14563	771 aa		12.98	□□□□□ -0.33
SREBF1-223	ENST00000584760	PLCL1	Q15111	1095 aa		12.98	□□□□□ -0.33
SREBF1-223	ENST00000584760	TRIP13	Q15645	432 aa	Predicted RBP	12.98	□□□□□ -0.33
SREBF1-223	ENST00000584760	PCID2	Q5JVF3	399 aa		12.98	□□□□□ -0.33
SREBF1-223	ENST00000584760	CERS6	Q6ZMG9	384 aa		12.98	□□□□□ -0.33
SREBF1-223	ENST00000584760	ACTRT1	Q8TDG2	376 aa		12.98	□□□□□ -0.33
SREBF1-223	ENST00000584760	ZFPM2	Q8WW38	1151 aa		12.98	□□□□□ -0.33
SREBF1-223	ENST00000584760	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	12.98	□□□□□ -0.33
SREBF1-223	ENST00000584760	MAGOHB	Q96A72	148 aa	Known RBP	12.98	□□□□□ -0.33
SREBF1-223	ENST00000584760	NAP1L3	Q99457	506 aa	Predicted RBP	12.98	□□□□□ -0.33
SREBF1-223	ENST00000584760	IL22	Q9GZX6	179 aa		12.98	□□□□□ -0.33
SREBF1-223	ENST00000584760	FBXO8	Q9NRD0	319 aa		12.98	□□□□□ -0.33
SREBF1-223	ENST00000584760	CHRAC1	Q9NRG0	131 aa		12.98	□□□□□ -0.33
SREBF1-223	ENST00000584760	SLC24A2	Q9UI40	661 aa		12.98	□□□□□ -0.33
SREBF1-223	ENST00000584760	SNX12	Q9UMY4	172 aa		12.98	□□□□□ -0.33
SREBF1-223	ENST00000584760	NEU2	Q9Y3R4	380 aa		12.98	□□□□□ -0.33
SREBF1-223	ENST00000584760	PCDHGA4	Q9Y5G9	962 aa		12.98	□□□□□ -0.33
SREBF1-223	ENST00000584760	SNRNP200	O75643	2136 aa	Known RBP	12.97	□□□□□ -0.33
SREBF1-223	ENST00000584760	OR5K3	A6NET4	321 aa		12.97	□□□□□ -0.33
SREBF1-223	ENST00000584760	STMND1	H3BQB6	276 aa		12.97	□□□□□ -0.33
SREBF1-223	ENST00000584760	AP3B1	O00203	1094 aa		12.97	□□□□□ -0.33
SREBF1-223	ENST00000584760	QSOX1	O00391	747 aa		12.97	□□□□□ -0.33
SREBF1-223	ENST00000584760	CES2	O00748	559 aa		12.97	□□□□□ -0.33
SREBF1-223	ENST00000584760	KIF1C	O43896	1103 aa	Known RBP	12.97	□□□□□ -0.33
SREBF1-223	ENST00000584760	OR1I1	O60431	355 aa		12.97	□□□□□ -0.33
SREBF1-223	ENST00000584760	WT1	P19544	449 aa	Predicted RBP	12.97	□□□□□ -0.33
SREBF1-223	ENST00000584760	MGAT1	P26572	445 aa		12.97	□□□□□ -0.33
SREBF1-223	ENST00000584760	PDHA2	P29803	388 aa		12.97	□□□□□ -0.33
SREBF1-223	ENST00000584760	COIL	P38432	576 aa	Predicted RBP	12.97	□□□□□ -0.33
SREBF1-223	ENST00000584760	PREP	P48147	710 aa		12.97	□□□□□ -0.33
SREBF1-223	ENST00000584760	PRAME	P78395	509 aa		12.97	□□□□□ -0.33
SREBF1-223	ENST00000584760	GPS1	Q13098	491 aa		12.97	□□□□□ -0.33
SREBF1-223	ENST00000584760	DCAF12	Q5T6F0	453 aa		12.97	□□□□□ -0.33
SREBF1-223	ENST00000584760	LYPLAL1	Q5VWZ2	237 aa		12.97	□□□□□ -0.33
SREBF1-223	ENST00000584760	IRGC	Q6NXR0	463 aa		12.97	□□□□□ -0.33
SREBF1-223	ENST00000584760	LRRC8B	Q6P9F7	803 aa		12.97	□□□□□ -0.33
SREBF1-223	ENST00000584760	FAM92B	Q6ZTR7	304 aa		12.97	□□□□□ -0.33
SREBF1-223	ENST00000584760	OR6P1	Q8NGX9	317 aa		12.97	□□□□□ -0.33
SREBF1-223	ENST00000584760	OR4L1	Q8NH43	312 aa		12.97	□□□□□ -0.33
SREBF1-223	ENST00000584760	TEFM	Q96QE5	360 aa	Known RBP	12.97	□□□□□ -0.33
SREBF1-223	ENST00000584760	ASPSCR1	Q9BZE9	553 aa		12.97	□□□□□ -0.33
SREBF1-223	ENST00000584760	APMAP	Q9HDC9	416 aa		12.97	□□□□□ -0.33
SREBF1-223	ENST00000584760	SYBU	Q9NX95	663 aa		12.97	□□□□□ -0.33
SREBF1-223	ENST00000584760	SEMA5B	Q9P283	1151 aa		12.97	□□□□□ -0.33
SREBF1-223	ENST00000584760	MARCH4	Q9P2E8	410 aa	Predicted RBP	12.97	□□□□□ -0.33
SREBF1-223	ENST00000584760	ANKMY1	Q9P2S6	941 aa		12.97	□□□□□ -0.33
SREBF1-223	ENST00000584760	PCDHB11	Q9Y5F2	797 aa		12.97	□□□□□ -0.33
SREBF1-223	ENST00000584760	UBR5	O95071	2799 aa	Predicted RBP	12.97	□□□□□ -0.33
SREBF1-223	ENST00000584760	LIN7A	O14910	233 aa	Predicted RBP	12.96	□□□□□ -0.33
SREBF1-223	ENST00000584760	ZNF185	O15231	689 aa		12.96	□□□□□ -0.33
SREBF1-223	ENST00000584760	PHF2	O75151	1096 aa		12.96	□□□□□ -0.33
SREBF1-223	ENST00000584760	RASSF9	O75901	435 aa		12.96	□□□□□ -0.33

Retrieved 100 of 20,778 RNA–protein pairs in 25 ms