RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 OOSP2Q86WS3 158 aa19.92■□□□□ 0.78
SS18-224ENST00000584083 IL22RA1Q8N6P7 574 aa19.92■□□□□ 0.78
SS18-224ENST00000584083 PEX13Q92968 403 aa19.92■□□□□ 0.78
SS18-224ENST00000584083 NKD1Q969G9 470 aa19.92■□□□□ 0.78
SS18-224ENST00000584083 IL22Q9GZX6 179 aa19.92■□□□□ 0.78
SS18-224ENST00000584083 OR52A5Q9H2C5 316 aa19.92■□□□□ 0.78
SS18-224ENST00000584083 HRASLS2Q9NWW9 162 aa19.92■□□□□ 0.78
SS18-224ENST00000584083 SIDT1Q9NXL6 827 aaKnown RBP19.92■□□□□ 0.78
SS18-224ENST00000584083 ANAPC5Q9UJX4 755 aa19.92■□□□□ 0.78
SS18-224ENST00000584083 OR6C74A6NCV1 312 aa19.91■□□□□ 0.78
SS18-224ENST00000584083 F8W8V4 182 aa19.91■□□□□ 0.78
SS18-224ENST00000584083 PGRMC1O00264 195 aaKnown RBP19.91■□□□□ 0.78
SS18-224ENST00000584083 KRT14P02533 472 aa19.91■□□□□ 0.78
SS18-224ENST00000584083 OR56A5P0C7T3 313 aa19.91■□□□□ 0.78
SS18-224ENST00000584083 PDHA2P29803 388 aa19.91■□□□□ 0.78
SS18-224ENST00000584083 PPARGP37231 505 aaPredicted RBP19.91■□□□□ 0.78
SS18-224ENST00000584083 CDK16Q00536 496 aa19.91■□□□□ 0.78
SS18-224ENST00000584083 RHDQ02161 417 aa19.91■□□□□ 0.78
SS18-224ENST00000584083 GPS1Q13098 491 aa19.91■□□□□ 0.78
SS18-224ENST00000584083 BRD3Q15059 726 aa19.91■□□□□ 0.78
SS18-224ENST00000584083 ZNF658BQ4V348 819 aaPredicted RBP19.91■□□□□ 0.78
SS18-224ENST00000584083 TTC27Q6P3X3 843 aa19.91■□□□□ 0.78
SS18-224ENST00000584083 PHC3Q8NDX5 983 aa19.91■□□□□ 0.78
SS18-224ENST00000584083 SNRNP27Q8WVK2 155 aaKnown RBP19.91■□□□□ 0.78
SS18-224ENST00000584083 KLHL6Q8WZ60 621 aa19.91■□□□□ 0.78
SS18-224ENST00000584083 ELMO1Q92556 727 aa19.91■□□□□ 0.78
SS18-224ENST00000584083 OR6C1Q96RD1 312 aa19.91■□□□□ 0.78
SS18-224ENST00000584083 OR5K3A6NET4 321 aa19.9■□□□□ 0.78
SS18-224ENST00000584083 LIN7AO14910 233 aaPredicted RBP19.9■□□□□ 0.78
SS18-224ENST00000584083 OR1I1O60431 355 aa19.9■□□□□ 0.78
SS18-224ENST00000584083 RAD1O60671 282 aa19.9■□□□□ 0.78
SS18-224ENST00000584083 TPSB2P20231 275 aa19.9■□□□□ 0.78
SS18-224ENST00000584083 MGAT1P26572 445 aa19.9■□□□□ 0.78
SS18-224ENST00000584083 CD151P48509 253 aa19.9■□□□□ 0.78
SS18-224ENST00000584083 SH3BP2P78314 561 aa19.9■□□□□ 0.78
SS18-224ENST00000584083 TPSAB1Q15661 275 aa19.9■□□□□ 0.78
SS18-224ENST00000584083 TAF1BQ53T94 588 aaPredicted RBP19.9■□□□□ 0.78
SS18-224ENST00000584083 DNTTIP2Q5QJE6 756 aaKnown RBP19.9■□□□□ 0.78
SS18-224ENST00000584083 KIAA1614Q5VZ46 1190 aa19.9■□□□□ 0.78
SS18-224ENST00000584083 ZNF534Q76KX8 674 aa19.9■□□□□ 0.78
SS18-224ENST00000584083 CACNA2D3Q8IZS8 1091 aa19.9■□□□□ 0.78
SS18-224ENST00000584083 ZSCAN1Q8NBB4 408 aa19.9■□□□□ 0.78
SS18-224ENST00000584083 ACVR1CQ8NER5 493 aa19.9■□□□□ 0.78
SS18-224ENST00000584083 OR4E2Q8NGC2 313 aa19.9■□□□□ 0.78
SS18-224ENST00000584083 COG1Q8WTW3 980 aa19.9■□□□□ 0.78
SS18-224ENST00000584083 LCN9Q8WX39 176 aa19.9■□□□□ 0.78
SS18-224ENST00000584083 UBXN4Q92575 508 aa19.9■□□□□ 0.78
SS18-224ENST00000584083 OSBPL9Q96SU4 736 aa19.9■□□□□ 0.78
SS18-224ENST00000584083 CATSPERZQ9NTU4 200 aa19.9■□□□□ 0.78
SS18-224ENST00000584083 IGHV5-51A0A0C4DH38 117 aa19.89■□□□□ 0.77
SS18-224ENST00000584083 TCRBV7S3A2A0A539 114 aa19.89■□□□□ 0.77
SS18-224ENST00000584083 UBA6A0AVT1 1052 aaPredicted RBP19.89■□□□□ 0.77
SS18-224ENST00000584083 LOC400499M0QZD8 3231 aa19.89■□□□□ 0.77
SS18-224ENST00000584083 ATXN7O15265 892 aaPredicted RBP19.89■□□□□ 0.77
SS18-224ENST00000584083 STK17BO94768 372 aa19.89■□□□□ 0.77
SS18-224ENST00000584083 COILP38432 576 aaPredicted RBP19.89■□□□□ 0.77
SS18-224ENST00000584083 ARCN1P48444 511 aaKnown RBP19.89■□□□□ 0.77
SS18-224ENST00000584083 ARL4DP49703 201 aa19.89■□□□□ 0.77
SS18-224ENST00000584083 SARNPP82979 210 aaKnown RBP19.89■□□□□ 0.77
SS18-224ENST00000584083 PRKAA1Q13131 559 aa19.89■□□□□ 0.77
SS18-224ENST00000584083 BOP1Q14137 746 aaKnown RBP19.89■□□□□ 0.77
SS18-224ENST00000584083 SYTL3Q4VX76 610 aa19.89■□□□□ 0.77
SS18-224ENST00000584083 AARS2Q5JTZ9 985 aaKnown RBP19.89■□□□□ 0.77
SS18-224ENST00000584083 LRRC8BQ6P9F7 803 aa19.89■□□□□ 0.77
SS18-224ENST00000584083 CCDC137Q6PK04 289 aaKnown RBP19.89■□□□□ 0.77
SS18-224ENST00000584083 SIDT2Q8NBJ9 832 aaKnown RBP19.89■□□□□ 0.77
SS18-224ENST00000584083 TFGQ92734 400 aaPredicted RBP19.89■□□□□ 0.77
SS18-224ENST00000584083 SGSM3Q96HU1 749 aa19.89■□□□□ 0.77
SS18-224ENST00000584083 ELMO2Q96JJ3 720 aa19.89■□□□□ 0.77
SS18-224ENST00000584083 CD180Q99467 661 aa19.89■□□□□ 0.77
SS18-224ENST00000584083 MAP3K3Q99759 626 aa19.89■□□□□ 0.77
SS18-224ENST00000584083 SRMSQ9H3Y6 488 aa19.89■□□□□ 0.77
SS18-224ENST00000584083 MVB12BQ9H7P6 319 aa19.89■□□□□ 0.77
SS18-224ENST00000584083 SYBUQ9NX95 663 aa19.89■□□□□ 0.77
SS18-224ENST00000584083 PILRAQ9UKJ1 303 aa19.89■□□□□ 0.77
SS18-224ENST00000584083 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.88■□□□□ 0.77
SS18-224ENST00000584083 TLCD2A6NGC4 264 aa19.88■□□□□ 0.77
SS18-224ENST00000584083 ERVH48-1M5A8F1 160 aa19.88■□□□□ 0.77
SS18-224ENST00000584083 CD3EAPO15446 510 aaKnown RBP19.88■□□□□ 0.77
SS18-224ENST00000584083 ITGB6P18564 788 aa19.88■□□□□ 0.77
SS18-224ENST00000584083 NELFEP18615 380 aaKnown RBP19.88■□□□□ 0.77
SS18-224ENST00000584083 POLR2CP19387 275 aaPredicted RBP19.88■□□□□ 0.77
SS18-224ENST00000584083 NMBRP28336 390 aa19.88■□□□□ 0.77
SS18-224ENST00000584083 PRKG2Q13237 762 aa19.88■□□□□ 0.77
SS18-224ENST00000584083 SEMA3AQ14563 771 aa19.88■□□□□ 0.77
SS18-224ENST00000584083 IL11RAQ14626 422 aa19.88■□□□□ 0.77
SS18-224ENST00000584083 CYP1B1Q16678 543 aa19.88■□□□□ 0.77
SS18-224ENST00000584083 NAPRTQ6XQN6 538 aa19.88■□□□□ 0.77
SS18-224ENST00000584083 LDB1Q86U70 411 aaPredicted RBP19.88■□□□□ 0.77
SS18-224ENST00000584083 RASGRP3Q8IV61 690 aa19.88■□□□□ 0.77
SS18-224ENST00000584083 NLGN4XQ8N0W4 816 aa19.88■□□□□ 0.77
SS18-224ENST00000584083 OTUD6BQ8N6M0 293 aa19.88■□□□□ 0.77
SS18-224ENST00000584083 NLGN4YQ8NFZ3 816 aaPredicted RBP19.88■□□□□ 0.77
SS18-224ENST00000584083 SLC39A7Q92504 469 aa19.88■□□□□ 0.77
SS18-224ENST00000584083 HGH1Q9BTY7 390 aa19.88■□□□□ 0.77
SS18-224ENST00000584083 TREX1Q9NSU2 369 aa19.88■□□□□ 0.77
SS18-224ENST00000584083 MARCH4Q9P2E8 410 aaPredicted RBP19.88■□□□□ 0.77
SS18-224ENST00000584083 SNX12Q9UMY4 172 aa19.88■□□□□ 0.77
SS18-224ENST00000584083 PCDHGA4Q9Y5G9 962 aa19.88■□□□□ 0.77
SS18-224ENST00000584083 GOLGA6L10A0A0M3HER8 536 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms