RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 PFDN6O15212 129 aa12.3□□□□□ -0.44
SMARCE1-218ENST00000582955 CAPN5O15484 640 aaPredicted RBP12.3□□□□□ -0.44
SMARCE1-218ENST00000582955 RASSF9O75901 435 aa12.3□□□□□ -0.44
SMARCE1-218ENST00000582955 CCL4P13236 92 aa12.3□□□□□ -0.44
SMARCE1-218ENST00000582955 NDUFS1P28331 727 aa12.3□□□□□ -0.44
SMARCE1-218ENST00000582955 ETV5P41161 510 aa12.3□□□□□ -0.44
SMARCE1-218ENST00000582955 MAGEA3P43357 314 aa12.3□□□□□ -0.44
SMARCE1-218ENST00000582955 CAPZBP47756 277 aa12.3□□□□□ -0.44
SMARCE1-218ENST00000582955 CSE1LP55060 971 aaKnown RBP12.3□□□□□ -0.44
SMARCE1-218ENST00000582955 GFERP55789 205 aa12.3□□□□□ -0.44
SMARCE1-218ENST00000582955 ANKRD20A4Q4UJ75 823 aa12.3□□□□□ -0.44
SMARCE1-218ENST00000582955 ZNF658BQ4V348 819 aaPredicted RBP12.3□□□□□ -0.44
SMARCE1-218ENST00000582955 PTRHD1Q6GMV3 140 aaKnown RBP12.3□□□□□ -0.44
SMARCE1-218ENST00000582955 IRGCQ6NXR0 463 aa12.3□□□□□ -0.44
SMARCE1-218ENST00000582955 KLHL35Q6PF15 583 aa12.3□□□□□ -0.44
SMARCE1-218ENST00000582955 LRRC69Q6ZNQ3 347 aa12.3□□□□□ -0.44
SMARCE1-218ENST00000582955 HOOK3Q86VS8 718 aa12.3□□□□□ -0.44
SMARCE1-218ENST00000582955 ZNF248Q8NDW4 579 aa12.3□□□□□ -0.44
SMARCE1-218ENST00000582955 STAMBPL1Q96FJ0 436 aa12.3□□□□□ -0.44
SMARCE1-218ENST00000582955 FCRL3Q96P31 734 aaPredicted RBP12.3□□□□□ -0.44
SMARCE1-218ENST00000582955 TRIM31Q9BZY9 425 aa12.3□□□□□ -0.44
SMARCE1-218ENST00000582955 OR52A5Q9H2C5 316 aa12.3□□□□□ -0.44
SMARCE1-218ENST00000582955 KIR3DX1Q9H7L2 352 aa12.3□□□□□ -0.44
SMARCE1-218ENST00000582955 IL1RAPL1Q9NZN1 696 aa12.3□□□□□ -0.44
SMARCE1-218ENST00000582955 GNPTGQ9UJJ9 305 aa12.3□□□□□ -0.44
SMARCE1-218ENST00000582955 DMXL2Q8TDJ6 3036 aa12.3□□□□□ -0.44
SMARCE1-218ENST00000582955 MN1Q10571 1320 aaPredicted RBP12.3□□□□□ -0.44
SMARCE1-218ENST00000582955 PIKFYVEQ9Y2I7 2098 aa12.3□□□□□ -0.44
SMARCE1-218ENST00000582955 CELSR3Q9NYQ7 3312 aa12.29□□□□□ -0.44
SMARCE1-218ENST00000582955 EFCAB7A8K855 629 aa12.29□□□□□ -0.44
SMARCE1-218ENST00000582955 IQCF5A8MTL0 148 aa12.29□□□□□ -0.44
SMARCE1-218ENST00000582955 SLC5A2P31639 672 aa12.29□□□□□ -0.44
SMARCE1-218ENST00000582955 EIF2S3P41091 472 aaKnown RBP12.29□□□□□ -0.44
SMARCE1-218ENST00000582955 LEPRP48357 1165 aaKnown RBP12.29□□□□□ -0.44
SMARCE1-218ENST00000582955 CD151P48509 253 aa12.29□□□□□ -0.44
SMARCE1-218ENST00000582955 EIF3BP55884 814 aaKnown RBP12.29□□□□□ -0.44
SMARCE1-218ENST00000582955 THOC5Q13769 683 aaKnown RBP12.29□□□□□ -0.44
SMARCE1-218ENST00000582955 DNAJC21Q5F1R6 531 aaKnown RBP12.29□□□□□ -0.44
SMARCE1-218ENST00000582955 RNF187Q5TA31 235 aaPredicted RBP12.29□□□□□ -0.44
SMARCE1-218ENST00000582955 NEPROQ6NW34 567 aa12.29□□□□□ -0.44
SMARCE1-218ENST00000582955 FAM92BQ6ZTR7 304 aa12.29□□□□□ -0.44
SMARCE1-218ENST00000582955 CLEC14AQ86T13 490 aa12.29□□□□□ -0.44
SMARCE1-218ENST00000582955 PDZD3Q86UT5 571 aa12.29□□□□□ -0.44
SMARCE1-218ENST00000582955 KRT222Q8N1A0 295 aa12.29□□□□□ -0.44
SMARCE1-218ENST00000582955 AGGF1Q8N302 714 aaeCLIP12.29□□□□□ -0.44
SMARCE1-218ENST00000582955 PHC3Q8NDX5 983 aa12.29□□□□□ -0.44
SMARCE1-218ENST00000582955 LKAAEAR1Q8TD35 194 aa12.29□□□□□ -0.44
SMARCE1-218ENST00000582955 HNRNPLLQ8WVV9 542 aaKnown RBP12.29□□□□□ -0.44
SMARCE1-218ENST00000582955 ZFPM2Q8WW38 1151 aa12.29□□□□□ -0.44
SMARCE1-218ENST00000582955 KCNE4Q8WWG9 221 aa12.29□□□□□ -0.44
SMARCE1-218ENST00000582955 TFGQ92734 400 aaPredicted RBP12.29□□□□□ -0.44
SMARCE1-218ENST00000582955 USP7Q93009 1102 aa12.29□□□□□ -0.44
SMARCE1-218ENST00000582955 ZDHHC12Q96GR4 267 aa12.29□□□□□ -0.44
SMARCE1-218ENST00000582955 SIGLEC10Q96LC7 697 aa12.29□□□□□ -0.44
SMARCE1-218ENST00000582955 C9orf72Q96LT7 481 aa12.29□□□□□ -0.44
SMARCE1-218ENST00000582955 C16orf45Q96MC5 204 aaPredicted RBP12.29□□□□□ -0.44
SMARCE1-218ENST00000582955 HGH1Q9BTY7 390 aa12.29□□□□□ -0.44
SMARCE1-218ENST00000582955 CARD6Q9BX69 1037 aa12.29□□□□□ -0.44
SMARCE1-218ENST00000582955 WDR70Q9NW82 654 aa12.29□□□□□ -0.44
SMARCE1-218ENST00000582955 PDP2Q9P2J9 529 aa12.29□□□□□ -0.44
SMARCE1-218ENST00000582955 SLC24A2Q9UI40 661 aa12.29□□□□□ -0.44
SMARCE1-218ENST00000582955 A0A087WV48 116 aa12.28□□□□□ -0.44
SMARCE1-218ENST00000582955 SLC5A10A0PJK1 596 aa12.28□□□□□ -0.44
SMARCE1-218ENST00000582955 EFCAB8A8MWE9 144 aa12.28□□□□□ -0.44
SMARCE1-218ENST00000582955 PRAMEF10O60809 474 aa12.28□□□□□ -0.44
SMARCE1-218ENST00000582955 BANF1O75531 89 aa12.28□□□□□ -0.44
SMARCE1-218ENST00000582955 USP1O94782 785 aa12.28□□□□□ -0.44
SMARCE1-218ENST00000582955 C9P02748 559 aa12.28□□□□□ -0.44
SMARCE1-218ENST00000582955 APOA4P06727 396 aa12.28□□□□□ -0.44
SMARCE1-218ENST00000582955 FGF3P11487 239 aaPredicted RBP12.28□□□□□ -0.44
SMARCE1-218ENST00000582955 OGNP20774 298 aaKnown RBP12.28□□□□□ -0.44
SMARCE1-218ENST00000582955 IVDP26440 423 aa12.28□□□□□ -0.44
SMARCE1-218ENST00000582955 CCR7P32248 378 aa12.28□□□□□ -0.44
SMARCE1-218ENST00000582955 ARCN1P48444 511 aaKnown RBP12.28□□□□□ -0.44
SMARCE1-218ENST00000582955 SEPHS1P49903 392 aa12.28□□□□□ -0.44
SMARCE1-218ENST00000582955 MRPS25P82663 173 aaKnown RBP12.28□□□□□ -0.44
SMARCE1-218ENST00000582955 PLOD1Q02809 727 aaPredicted RBP12.28□□□□□ -0.44
SMARCE1-218ENST00000582955 DHX9Q08211 1270 aaKnown RBP12.28□□□□□ -0.44
SMARCE1-218ENST00000582955 C2orf54Q08AI8 447 aa12.28□□□□□ -0.44
SMARCE1-218ENST00000582955 HSPA14Q0VDF9 509 aa12.28□□□□□ -0.44
SMARCE1-218ENST00000582955 PRKG2Q13237 762 aa12.28□□□□□ -0.44
SMARCE1-218ENST00000582955 MORF4L2Q15014 288 aa12.28□□□□□ -0.44
SMARCE1-218ENST00000582955 TMED2Q15363 201 aa12.28□□□□□ -0.44
SMARCE1-218ENST00000582955 TYSND1Q2T9J0 566 aa12.28□□□□□ -0.44
SMARCE1-218ENST00000582955 BBS9Q3SYG4 887 aa12.28□□□□□ -0.44
SMARCE1-218ENST00000582955 TMEM164Q5U3C3 297 aa12.28□□□□□ -0.44
SMARCE1-218ENST00000582955 ZNF470Q6ECI4 717 aa12.28□□□□□ -0.44
SMARCE1-218ENST00000582955 ARMC6Q6NXE6 501 aa12.28□□□□□ -0.44
SMARCE1-218ENST00000582955 C19orf48Q6RUI8 117 aa12.28□□□□□ -0.44
SMARCE1-218ENST00000582955 ARHGAP22Q7Z5H3 698 aa12.28□□□□□ -0.44
SMARCE1-218ENST00000582955 TMEM135Q86UB9 458 aa12.28□□□□□ -0.44
SMARCE1-218ENST00000582955 OOSP2Q86WS3 158 aa12.28□□□□□ -0.44
SMARCE1-218ENST00000582955 LRRC6Q86X45 466 aa12.28□□□□□ -0.44
SMARCE1-218ENST00000582955 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.28□□□□□ -0.44
SMARCE1-218ENST00000582955 ACVR1CQ8NER5 493 aa12.28□□□□□ -0.44
SMARCE1-218ENST00000582955 SPATA4Q8NEY3 305 aa12.28□□□□□ -0.44
SMARCE1-218ENST00000582955 ART4Q93070 314 aa12.28□□□□□ -0.44
SMARCE1-218ENST00000582955 SNF8Q96H20 258 aa12.28□□□□□ -0.44
SMARCE1-218ENST00000582955 PANX3Q96QZ0 392 aa12.28□□□□□ -0.44
SMARCE1-218ENST00000582955 TCF12Q99081 682 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms