RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 CDK16Q00536 496 aa19.01■□□□□ 0.63
SREBF1-220ENST00000581707 TRIP13Q15645 432 aaPredicted RBP19.01■□□□□ 0.63
SREBF1-220ENST00000581707 KCTD19Q17RG1 926 aaPredicted RBP19.01■□□□□ 0.63
SREBF1-220ENST00000581707 CACNA2D3Q8IZS8 1091 aa19.01■□□□□ 0.63
SREBF1-220ENST00000581707 IL22RA1Q8N6P7 574 aa19.01■□□□□ 0.63
SREBF1-220ENST00000581707 LSM14AQ8ND56 463 aaKnown RBP19.01■□□□□ 0.63
SREBF1-220ENST00000581707 FERD3LQ96RJ6 166 aa19.01■□□□□ 0.63
SREBF1-220ENST00000581707 NAP1L3Q99457 506 aaPredicted RBP19.01■□□□□ 0.63
SREBF1-220ENST00000581707 AP1M1Q9BXS5 423 aa19.01■□□□□ 0.63
SREBF1-220ENST00000581707 SPRY4Q9C004 299 aa19.01■□□□□ 0.63
SREBF1-220ENST00000581707 KCNF1Q9H3M0 494 aa19.01■□□□□ 0.63
SREBF1-220ENST00000581707 BFARQ9NZS9 450 aa19.01■□□□□ 0.63
SREBF1-220ENST00000581707 SEMA5BQ9P283 1151 aa19.01■□□□□ 0.63
SREBF1-220ENST00000581707 PILRAQ9UKJ1 303 aa19.01■□□□□ 0.63
SREBF1-220ENST00000581707 TTC7AQ9ULT0 858 aaPredicted RBP19.01■□□□□ 0.63
SREBF1-220ENST00000581707 ATRXP46100 2492 aa19■□□□□ 0.63
SREBF1-220ENST00000581707 IGHV5-51A0A0C4DH38 117 aa19■□□□□ 0.63
SREBF1-220ENST00000581707 OR6C74A6NCV1 312 aa19■□□□□ 0.63
SREBF1-220ENST00000581707 OR1I1O60431 355 aa19■□□□□ 0.63
SREBF1-220ENST00000581707 RAD1O60671 282 aa19■□□□□ 0.63
SREBF1-220ENST00000581707 OR56A5P0C7T3 313 aa19■□□□□ 0.63
SREBF1-220ENST00000581707 NELFEP18615 380 aaKnown RBP19■□□□□ 0.63
SREBF1-220ENST00000581707 PPARGP37231 505 aaPredicted RBP19■□□□□ 0.63
SREBF1-220ENST00000581707 PREPP48147 710 aa19■□□□□ 0.63
SREBF1-220ENST00000581707 SH3BP2P78314 561 aa19■□□□□ 0.63
SREBF1-220ENST00000581707 FASTKD1Q53R41 847 aaKnown RBP19■□□□□ 0.63
SREBF1-220ENST00000581707 DNTTIP2Q5QJE6 756 aaKnown RBP19■□□□□ 0.63
SREBF1-220ENST00000581707 KIAA1614Q5VZ46 1190 aa19■□□□□ 0.63
SREBF1-220ENST00000581707 ARMC6Q6NXE6 501 aa19■□□□□ 0.63
SREBF1-220ENST00000581707 TTC27Q6P3X3 843 aa19■□□□□ 0.63
SREBF1-220ENST00000581707 ZNF534Q76KX8 674 aa19■□□□□ 0.63
SREBF1-220ENST00000581707 OOSP2Q86WS3 158 aa19■□□□□ 0.63
SREBF1-220ENST00000581707 SLC35F6Q8N357 371 aa19■□□□□ 0.63
SREBF1-220ENST00000581707 ZSCAN1Q8NBB4 408 aa19■□□□□ 0.63
SREBF1-220ENST00000581707 PHC3Q8NDX5 983 aa19■□□□□ 0.63
SREBF1-220ENST00000581707 ACVR1CQ8NER5 493 aa19■□□□□ 0.63
SREBF1-220ENST00000581707 SLC39A7Q92504 469 aa19■□□□□ 0.63
SREBF1-220ENST00000581707 UBXN4Q92575 508 aa19■□□□□ 0.63
SREBF1-220ENST00000581707 MAGOHBQ96A72 148 aaKnown RBP19■□□□□ 0.63
SREBF1-220ENST00000581707 OR6C1Q96RD1 312 aa19■□□□□ 0.63
SREBF1-220ENST00000581707 CD180Q99467 661 aa19■□□□□ 0.63
SREBF1-220ENST00000581707 IL22Q9GZX6 179 aa19■□□□□ 0.63
SREBF1-220ENST00000581707 TRMT1Q9NXH9 659 aaKnown RBP19■□□□□ 0.63
SREBF1-220ENST00000581707 F8W8V4 182 aa18.99■□□□□ 0.63
SREBF1-220ENST00000581707 TK2O00142 265 aa18.99■□□□□ 0.63
SREBF1-220ENST00000581707 LIN7AO14910 233 aaPredicted RBP18.99■□□□□ 0.63
SREBF1-220ENST00000581707 STK17BO94768 372 aa18.99■□□□□ 0.63
SREBF1-220ENST00000581707 TPSB2P20231 275 aa18.99■□□□□ 0.63
SREBF1-220ENST00000581707 VPS41P49754 854 aa18.99■□□□□ 0.63
SREBF1-220ENST00000581707 GPS1Q13098 491 aa18.99■□□□□ 0.63
SREBF1-220ENST00000581707 IL11RAQ14626 422 aa18.99■□□□□ 0.63
SREBF1-220ENST00000581707 TPSAB1Q15661 275 aa18.99■□□□□ 0.63
SREBF1-220ENST00000581707 TAF1BQ53T94 588 aaPredicted RBP18.99■□□□□ 0.63
SREBF1-220ENST00000581707 LRRC8BQ6P9F7 803 aa18.99■□□□□ 0.63
SREBF1-220ENST00000581707 OR4E2Q8NGC2 313 aa18.99■□□□□ 0.63
SREBF1-220ENST00000581707 ELMO1Q92556 727 aa18.99■□□□□ 0.63
SREBF1-220ENST00000581707 ANP32BQ92688 251 aaKnown RBP18.99■□□□□ 0.63
SREBF1-220ENST00000581707 TFGQ92734 400 aaPredicted RBP18.99■□□□□ 0.63
SREBF1-220ENST00000581707 MAP3K3Q99759 626 aa18.99■□□□□ 0.63
SREBF1-220ENST00000581707 MVB12BQ9H7P6 319 aa18.99■□□□□ 0.63
SREBF1-220ENST00000581707 ANAPC5Q9UJX4 755 aa18.99■□□□□ 0.63
SREBF1-220ENST00000581707 TMEM184BQ9Y519 407 aaPredicted RBP18.99■□□□□ 0.63
SREBF1-220ENST00000581707 PCDHGA4Q9Y5G9 962 aa18.99■□□□□ 0.63
SREBF1-220ENST00000581707 KALRNO60229 2985 aa18.99■□□□□ 0.63
SREBF1-220ENST00000581707 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.98■□□□□ 0.63
SREBF1-220ENST00000581707 TCRBV7S3A2A0A539 114 aa18.98■□□□□ 0.63
SREBF1-220ENST00000581707 UBA6A0AVT1 1052 aaPredicted RBP18.98■□□□□ 0.63
SREBF1-220ENST00000581707 TLCD2A6NGC4 264 aa18.98■□□□□ 0.63
SREBF1-220ENST00000581707 PGRMC1O00264 195 aaKnown RBP18.98■□□□□ 0.63
SREBF1-220ENST00000581707 KIF5CO60282 957 aa18.98■□□□□ 0.63
SREBF1-220ENST00000581707 KRT14P02533 472 aa18.98■□□□□ 0.63
SREBF1-220ENST00000581707 WT1P19544 449 aaPredicted RBP18.98■□□□□ 0.63
SREBF1-220ENST00000581707 MGAT1P26572 445 aa18.98■□□□□ 0.63
SREBF1-220ENST00000581707 MAP4P27816 1152 aaKnown RBP18.98■□□□□ 0.63
SREBF1-220ENST00000581707 TERF1P54274 439 aa18.98■□□□□ 0.63
SREBF1-220ENST00000581707 SEMA3AQ14563 771 aa18.98■□□□□ 0.63
SREBF1-220ENST00000581707 BRD3Q15059 726 aa18.98■□□□□ 0.63
SREBF1-220ENST00000581707 AARS2Q5JTZ9 985 aaKnown RBP18.98■□□□□ 0.63
SREBF1-220ENST00000581707 PCSK4Q6UW60 755 aa18.98■□□□□ 0.63
SREBF1-220ENST00000581707 TIPARPQ7Z3E1 657 aaKnown RBP18.98■□□□□ 0.63
SREBF1-220ENST00000581707 NLGN4XQ8N0W4 816 aa18.98■□□□□ 0.63
SREBF1-220ENST00000581707 NLGN4YQ8NFZ3 816 aaPredicted RBP18.98■□□□□ 0.63
SREBF1-220ENST00000581707 COG1Q8WTW3 980 aa18.98■□□□□ 0.63
SREBF1-220ENST00000581707 LCN9Q8WX39 176 aa18.98■□□□□ 0.63
SREBF1-220ENST00000581707 TTC9Q92623 222 aa18.98■□□□□ 0.63
SREBF1-220ENST00000581707 WBP1Q96G27 269 aa18.98■□□□□ 0.63
SREBF1-220ENST00000581707 SLC41A2Q96JW4 573 aa18.98■□□□□ 0.63
SREBF1-220ENST00000581707 OSBPL9Q96SU4 736 aa18.98■□□□□ 0.63
SREBF1-220ENST00000581707 SRMSQ9H3Y6 488 aa18.98■□□□□ 0.63
SREBF1-220ENST00000581707 TREX1Q9NSU2 369 aa18.98■□□□□ 0.63
SREBF1-220ENST00000581707 CATSPERZQ9NTU4 200 aa18.98■□□□□ 0.63
SREBF1-220ENST00000581707 PIEZO2Q9H5I5 2752 aa18.98■□□□□ 0.63
SREBF1-220ENST00000581707 POLR2CP19387 275 aaPredicted RBP18.97■□□□□ 0.63
SREBF1-220ENST00000581707 NMBRP28336 390 aa18.97■□□□□ 0.63
SREBF1-220ENST00000581707 COILP38432 576 aaPredicted RBP18.97■□□□□ 0.63
SREBF1-220ENST00000581707 ARCN1P48444 511 aaKnown RBP18.97■□□□□ 0.63
SREBF1-220ENST00000581707 ARL4DP49703 201 aa18.97■□□□□ 0.63
SREBF1-220ENST00000581707 SARNPP82979 210 aaKnown RBP18.97■□□□□ 0.63
SREBF1-220ENST00000581707 PLOD1Q02809 727 aaPredicted RBP18.97■□□□□ 0.63
SREBF1-220ENST00000581707 PRKAA1Q13131 559 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms