RNA–Protein interactions for RNA: ENST00000581536.5

TOP3A-211, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-211ENST00000581536 RSC1A1Q92681 617 aa9.49□□□□□ -0.89
TOP3A-211ENST00000581536 PPP1R2P1Q96PQ5 205 aa9.49□□□□□ -0.89
TOP3A-211ENST00000581536 STN1Q9H668 368 aaKnown RBP9.49□□□□□ -0.89
TOP3A-211ENST00000581536 UCK1Q9HA47 277 aa9.49□□□□□ -0.89
TOP3A-211ENST00000581536 ZDHHC3Q9NYG2 299 aa9.49□□□□□ -0.89
TOP3A-211ENST00000581536 FEZ2Q9UHY8 353 aaPredicted RBP9.49□□□□□ -0.89
TOP3A-211ENST00000581536 KALRNO60229 2985 aa9.49□□□□□ -0.89
TOP3A-211ENST00000581536 CACNA1GO43497 2377 aa9.49□□□□□ -0.89
TOP3A-211ENST00000581536 TEX51A0A1B0GUA7 166 aa9.48□□□□□ -0.89
TOP3A-211ENST00000581536 TCRBV7S3A2A0A539 114 aa9.48□□□□□ -0.89
TOP3A-211ENST00000581536 LILRA5A6NI73 299 aa9.48□□□□□ -0.89
TOP3A-211ENST00000581536 H7C0S8 307 aa9.48□□□□□ -0.89
TOP3A-211ENST00000581536 SUN1O94901 812 aa9.48□□□□□ -0.89
TOP3A-211ENST00000581536 C9P02748 559 aa9.48□□□□□ -0.89
TOP3A-211ENST00000581536 VCLP18206 1134 aa9.48□□□□□ -0.89
TOP3A-211ENST00000581536 ITGALP20701 1170 aa9.48□□□□□ -0.89
TOP3A-211ENST00000581536 PSMA3P25788 255 aa9.48□□□□□ -0.89
TOP3A-211ENST00000581536 ACRV1P26436 265 aa9.48□□□□□ -0.89
TOP3A-211ENST00000581536 FDFT1P37268 417 aa9.48□□□□□ -0.89
TOP3A-211ENST00000581536 HALP42357 657 aa9.48□□□□□ -0.89
TOP3A-211ENST00000581536 TMPRSS3P57727 454 aa9.48□□□□□ -0.89
TOP3A-211ENST00000581536 CYP4F2P78329 520 aa9.48□□□□□ -0.89
TOP3A-211ENST00000581536 CRADDP78560 199 aa9.48□□□□□ -0.89
TOP3A-211ENST00000581536 MC2RQ01718 297 aa9.48□□□□□ -0.89
TOP3A-211ENST00000581536 BRD3Q15059 726 aa9.48□□□□□ -0.89
TOP3A-211ENST00000581536 TRIP13Q15645 432 aaPredicted RBP9.48□□□□□ -0.89
TOP3A-211ENST00000581536 DBN1Q16643 649 aa9.48□□□□□ -0.89
TOP3A-211ENST00000581536 GPR33Q49SQ1 333 aa9.48□□□□□ -0.89
TOP3A-211ENST00000581536 CRTC2Q53ET0 693 aaPredicted RBP9.48□□□□□ -0.89
TOP3A-211ENST00000581536 CAPRIN2Q6IMN6 1127 aaKnown RBP9.48□□□□□ -0.89
TOP3A-211ENST00000581536 PPP1R21Q6ZMI0 780 aa9.48□□□□□ -0.89
TOP3A-211ENST00000581536 CCDC81Q6ZN84 652 aa9.48□□□□□ -0.89
TOP3A-211ENST00000581536 DTX1Q86Y01 620 aa9.48□□□□□ -0.89
TOP3A-211ENST00000581536 PRELID2Q8N945 189 aa9.48□□□□□ -0.89
TOP3A-211ENST00000581536 TRIM58Q8NG06 486 aa9.48□□□□□ -0.89
TOP3A-211ENST00000581536 OR13J1Q8NGT2 312 aa9.48□□□□□ -0.89
TOP3A-211ENST00000581536 NKD1Q969G9 470 aa9.48□□□□□ -0.89
TOP3A-211ENST00000581536 HDAC10Q969S8 669 aa9.48□□□□□ -0.89
TOP3A-211ENST00000581536 DCUN1D1Q96GG9 259 aa9.48□□□□□ -0.89
TOP3A-211ENST00000581536 LINC00615Q96LM1 132 aaPredicted RBP9.48□□□□□ -0.89
TOP3A-211ENST00000581536 C9orf72Q96LT7 481 aa9.48□□□□□ -0.89
TOP3A-211ENST00000581536 C12orf66Q96MD2 445 aa9.48□□□□□ -0.89
TOP3A-211ENST00000581536 ALS2CR12Q96Q35 445 aa9.48□□□□□ -0.89
TOP3A-211ENST00000581536 CCNL2Q96S94 520 aaPredicted RBP9.48□□□□□ -0.89
TOP3A-211ENST00000581536 COPS8Q99627 209 aa9.48□□□□□ -0.89
TOP3A-211ENST00000581536 DPYSL5Q9BPU6 564 aa9.48□□□□□ -0.89
TOP3A-211ENST00000581536 CCM2Q9BSQ5 444 aa9.48□□□□□ -0.89
TOP3A-211ENST00000581536 FRMD8P1Q9BZ68 369 aaPredicted RBP9.48□□□□□ -0.89
TOP3A-211ENST00000581536 SPRY4Q9C004 299 aa9.48□□□□□ -0.89
TOP3A-211ENST00000581536 ZCCHC2Q9C0B9 1178 aaKnown RBP9.48□□□□□ -0.89
TOP3A-211ENST00000581536 KCNF1Q9H3M0 494 aa9.48□□□□□ -0.89
TOP3A-211ENST00000581536 TIMMDC1Q9NPL8 285 aa9.48□□□□□ -0.89
TOP3A-211ENST00000581536 CASS4Q9NQ75 786 aa9.48□□□□□ -0.89
TOP3A-211ENST00000581536 CHRAC1Q9NRG0 131 aa9.48□□□□□ -0.89
TOP3A-211ENST00000581536 TRMT1Q9NXH9 659 aaKnown RBP9.48□□□□□ -0.89
TOP3A-211ENST00000581536 SMARCAL1Q9NZC9 954 aa9.48□□□□□ -0.89
TOP3A-211ENST00000581536 AKAP7Q9P0M2 348 aaPredicted RBP9.48□□□□□ -0.89
TOP3A-211ENST00000581536 ACSL6Q9UKU0 697 aa9.48□□□□□ -0.89
TOP3A-211ENST00000581536 BOD1L1Q8NFC6 3051 aa9.47□□□□□ -0.89
TOP3A-211ENST00000581536 IGLV3-16A0A075B6K0 115 aa9.47□□□□□ -0.89
TOP3A-211ENST00000581536 IGHV5-51A0A0C4DH38 117 aa9.47□□□□□ -0.89
TOP3A-211ENST00000581536 B4E171 279 aa9.47□□□□□ -0.89
TOP3A-211ENST00000581536 E7EVH7 732 aa9.47□□□□□ -0.89
TOP3A-211ENST00000581536 K7ENP7 123 aa9.47□□□□□ -0.89
TOP3A-211ENST00000581536 OR1I1O60431 355 aa9.47□□□□□ -0.89
TOP3A-211ENST00000581536 ZNF189O75820 626 aaPredicted RBP9.47□□□□□ -0.89
TOP3A-211ENST00000581536 GOT2P00505 430 aaKnown RBP9.47□□□□□ -0.89
TOP3A-211ENST00000581536 APRTP07741 180 aa9.47□□□□□ -0.89
TOP3A-211ENST00000581536 LIPCP11150 499 aa9.47□□□□□ -0.89
TOP3A-211ENST00000581536 MTHFD1P11586 935 aaKnown RBP9.47□□□□□ -0.89
TOP3A-211ENST00000581536 ZNF28P17035 718 aa9.47□□□□□ -0.89
TOP3A-211ENST00000581536 ADRA1DP25100 572 aa9.47□□□□□ -0.89
TOP3A-211ENST00000581536 MSNP26038 577 aaKnown RBP9.47□□□□□ -0.89
TOP3A-211ENST00000581536 FOXN2P32314 431 aa9.47□□□□□ -0.89
TOP3A-211ENST00000581536 TSPAN7P41732 249 aa9.47□□□□□ -0.89
TOP3A-211ENST00000581536 ARCN1P48444 511 aaKnown RBP9.47□□□□□ -0.89
TOP3A-211ENST00000581536 CACNG1Q06432 222 aa9.47□□□□□ -0.89
TOP3A-211ENST00000581536 CDH17Q12864 832 aa9.47□□□□□ -0.89
TOP3A-211ENST00000581536 SEMA5AQ13591 1074 aa9.47□□□□□ -0.89
TOP3A-211ENST00000581536 SEMA3AQ14563 771 aa9.47□□□□□ -0.89
TOP3A-211ENST00000581536 SKIDA1Q1XH10 827 aa9.47□□□□□ -0.89
TOP3A-211ENST00000581536 ZNF658BQ4V348 819 aaPredicted RBP9.47□□□□□ -0.89
TOP3A-211ENST00000581536 BCL7AQ4VC05 210 aa9.47□□□□□ -0.89
TOP3A-211ENST00000581536 DCAF12Q5T6F0 453 aa9.47□□□□□ -0.89
TOP3A-211ENST00000581536 TSTD2Q5T7W7 516 aa9.47□□□□□ -0.89
TOP3A-211ENST00000581536 TMEM164Q5U3C3 297 aa9.47□□□□□ -0.89
TOP3A-211ENST00000581536 TTC27Q6P3X3 843 aa9.47□□□□□ -0.89
TOP3A-211ENST00000581536 DRICH1Q6PGQ1 229 aaPredicted RBP9.47□□□□□ -0.89
TOP3A-211ENST00000581536 INO80CQ6PI98 192 aaPredicted RBP9.47□□□□□ -0.89
TOP3A-211ENST00000581536 FBXO38Q6PIJ6 1188 aa9.47□□□□□ -0.89
TOP3A-211ENST00000581536 CES3Q6UWW8 571 aa9.47□□□□□ -0.89
TOP3A-211ENST00000581536 CERS6Q6ZMG9 384 aa9.47□□□□□ -0.89
TOP3A-211ENST00000581536 GSTA5Q7RTV2 222 aa9.47□□□□□ -0.89
TOP3A-211ENST00000581536 TIPARPQ7Z3E1 657 aaKnown RBP9.47□□□□□ -0.89
TOP3A-211ENST00000581536 LINC00523Q86TU6 105 aa9.47□□□□□ -0.89
TOP3A-211ENST00000581536 LDB1Q86U70 411 aaPredicted RBP9.47□□□□□ -0.89
TOP3A-211ENST00000581536 PLXDC1Q8IUK5 500 aa9.47□□□□□ -0.89
TOP3A-211ENST00000581536 CCDC89Q8N998 374 aa9.47□□□□□ -0.89
TOP3A-211ENST00000581536 UBE2Q2Q8WVN8 375 aa9.47□□□□□ -0.89
TOP3A-211ENST00000581536 ULK4Q96C45 1275 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms