RNA–Protein interactions for RNA: ENST00000581093.1

SENP3-206, Transcript of SUMO specific peptidase 3, humanhuman

TSL 5

Gene SENP3, Length 493 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-206ENST00000581093 PCDHA6Q9UN73 950 aa6.67□□□□□ -1.34
SENP3-206ENST00000581093 CHKBQ9Y259 395 aa6.67□□□□□ -1.34
SENP3-206ENST00000581093 PCDHA8Q9Y5H6 950 aa6.67□□□□□ -1.34
SENP3-206ENST00000581093 PCDHA1Q9Y5I3 950 aa6.67□□□□□ -1.34
SENP3-206ENST00000581093 GREB1Q4ZG55 1949 aa6.67□□□□□ -1.34
SENP3-206ENST00000581093 PCNX2A6NKB5 2137 aa6.67□□□□□ -1.34
SENP3-206ENST00000581093 A0A075B6Q4 140 aa6.66□□□□□ -1.34
SENP3-206ENST00000581093 HTRA2O43464 458 aaPredicted RBP6.66□□□□□ -1.34
SENP3-206ENST00000581093 VEGFDO43915 354 aa6.66□□□□□ -1.34
SENP3-206ENST00000581093 UGDHO60701 494 aa6.66□□□□□ -1.34
SENP3-206ENST00000581093 MAGEC1O60732 1142 aa6.66□□□□□ -1.34
SENP3-206ENST00000581093 N4BP1O75113 896 aaKnown RBP6.66□□□□□ -1.34
SENP3-206ENST00000581093 CDH16O75309 829 aa6.66□□□□□ -1.34
SENP3-206ENST00000581093 PRDM1O75626 825 aa6.66□□□□□ -1.34
SENP3-206ENST00000581093 CLPXO76031 633 aa6.66□□□□□ -1.34
SENP3-206ENST00000581093 SORBS2O94875 1100 aaKnown RBP6.66□□□□□ -1.34
SENP3-206ENST00000581093 PDGFAP04085 211 aa6.66□□□□□ -1.34
SENP3-206ENST00000581093 LGALS2P05162 132 aa6.66□□□□□ -1.34
SENP3-206ENST00000581093 TUBBP07437 444 aa6.66□□□□□ -1.34
SENP3-206ENST00000581093 KRT19P08727 400 aa6.66□□□□□ -1.34
SENP3-206ENST00000581093 PLA2G4BP0C869 781 aa6.66□□□□□ -1.34
SENP3-206ENST00000581093 EPCAMP16422 314 aa6.66□□□□□ -1.34
SENP3-206ENST00000581093 PTPN1P18031 435 aaKnown RBP6.66□□□□□ -1.34
SENP3-206ENST00000581093 SPINK2P20155 84 aa6.66□□□□□ -1.34
SENP3-206ENST00000581093 TNFRSF8P28908 595 aa6.66□□□□□ -1.34
SENP3-206ENST00000581093 CDC25AP30304 524 aa6.66□□□□□ -1.34
SENP3-206ENST00000581093 CDC25BP30305 580 aa6.66□□□□□ -1.34
SENP3-206ENST00000581093 OXTRP30559 389 aa6.66□□□□□ -1.34
SENP3-206ENST00000581093 CASP14P31944 242 aa6.66□□□□□ -1.34
SENP3-206ENST00000581093 YWHABP31946 246 aaKnown RBP6.66□□□□□ -1.34
SENP3-206ENST00000581093 EIF2S3P41091 472 aaKnown RBP6.66□□□□□ -1.34
SENP3-206ENST00000581093 ZNF165P49910 485 aa6.66□□□□□ -1.34
SENP3-206ENST00000581093 P2RY4P51582 365 aa6.66□□□□□ -1.34
SENP3-206ENST00000581093 ARSEP51690 589 aa6.66□□□□□ -1.34
SENP3-206ENST00000581093 AGFG1P52594 562 aaKnown RBP6.66□□□□□ -1.34
SENP3-206ENST00000581093 RIDAP52758 137 aaKnown RBP6.66□□□□□ -1.34
SENP3-206ENST00000581093 CRYBB1P53674 252 aaPredicted RBP6.66□□□□□ -1.34
SENP3-206ENST00000581093 ITGA8P53708 1063 aa6.66□□□□□ -1.34
SENP3-206ENST00000581093 GDF10P55107 478 aa6.66□□□□□ -1.34
SENP3-206ENST00000581093 SELENOVP59797 346 aa6.66□□□□□ -1.34
SENP3-206ENST00000581093 DCDC1P59894 354 aa6.66□□□□□ -1.34
SENP3-206ENST00000581093 STX3Q13277 289 aa6.66□□□□□ -1.34
SENP3-206ENST00000581093 ORC1Q13415 861 aa6.66□□□□□ -1.34
SENP3-206ENST00000581093 ITGA9Q13797 1035 aa6.66□□□□□ -1.34
SENP3-206ENST00000581093 CAPSQ13938 189 aa6.66□□□□□ -1.34
SENP3-206ENST00000581093 IFI16Q16666 785 aaKnown RBP6.66□□□□□ -1.34
SENP3-206ENST00000581093 FAXCQ5TGI0 409 aa6.66□□□□□ -1.34
SENP3-206ENST00000581093 ZNF468Q5VIY5 522 aaPredicted RBP6.66□□□□□ -1.34
SENP3-206ENST00000581093 KCTD11Q693B1 232 aa6.66□□□□□ -1.34
SENP3-206ENST00000581093 LRRC8BQ6P9F7 803 aa6.66□□□□□ -1.34
SENP3-206ENST00000581093 LINC00696Q6ZRV3 163 aa6.66□□□□□ -1.34
SENP3-206ENST00000581093 PRUNE1Q86TP1 453 aa6.66□□□□□ -1.34
SENP3-206ENST00000581093 TIGD4Q8IY51 512 aa6.66□□□□□ -1.34
SENP3-206ENST00000581093 RCOR2Q8IZ40 523 aa6.66□□□□□ -1.34
SENP3-206ENST00000581093 TAGAPQ8N103 731 aa6.66□□□□□ -1.34
SENP3-206ENST00000581093 C17orf53Q8N3J3 647 aaPredicted RBP6.66□□□□□ -1.34
SENP3-206ENST00000581093 ATG16L2Q8NAA4 619 aa6.66□□□□□ -1.34
SENP3-206ENST00000581093 FNDC5Q8NAU1 212 aa6.66□□□□□ -1.34
SENP3-206ENST00000581093 RCBTB1Q8NDN9 531 aa6.66□□□□□ -1.34
SENP3-206ENST00000581093 NKD1Q969G9 470 aa6.66□□□□□ -1.34
SENP3-206ENST00000581093 FBXO32Q969P5 355 aa6.66□□□□□ -1.34
SENP3-206ENST00000581093 ERLEC1Q96DZ1 483 aa6.66□□□□□ -1.34
SENP3-206ENST00000581093 SIPA1Q96FS4 1042 aa6.66□□□□□ -1.34
SENP3-206ENST00000581093 ZFYVE19Q96K21 471 aa6.66□□□□□ -1.34
SENP3-206ENST00000581093 DNAJC1Q96KC8 554 aaKnown RBP6.66□□□□□ -1.34
SENP3-206ENST00000581093 B3GALT6Q96L58 329 aa6.66□□□□□ -1.34
SENP3-206ENST00000581093 RAB3IPQ96QF0 476 aaPredicted RBP6.66□□□□□ -1.34
SENP3-206ENST00000581093 MIPEPQ99797 713 aa6.66□□□□□ -1.34
SENP3-206ENST00000581093 MYL10Q9BUA6 226 aa6.66□□□□□ -1.34
SENP3-206ENST00000581093 PAPOLGQ9BWT3 736 aaKnown RBP6.66□□□□□ -1.34
SENP3-206ENST00000581093 ITPAQ9BY32 194 aa6.66□□□□□ -1.34
SENP3-206ENST00000581093 POTEKPQ9BYX7 375 aa6.66□□□□□ -1.34
SENP3-206ENST00000581093 RAB33BQ9H082 229 aa6.66□□□□□ -1.34
SENP3-206ENST00000581093 DDX47Q9H0S4 455 aaKnown RBP6.66□□□□□ -1.34
SENP3-206ENST00000581093 C12orf65Q9H3J6 166 aaKnown RBP6.66□□□□□ -1.34
SENP3-206ENST00000581093 CAB39LQ9H9S4 337 aa6.66□□□□□ -1.34
SENP3-206ENST00000581093 NOD2Q9HC29 1040 aa6.66□□□□□ -1.34
SENP3-206ENST00000581093 SEPSECSQ9HD40 501 aaKnown RBP6.66□□□□□ -1.34
SENP3-206ENST00000581093 PRMT8Q9NR22 394 aaPredicted RBP6.66□□□□□ -1.34
SENP3-206ENST00000581093 SLC2A4RGQ9NR83 387 aa6.66□□□□□ -1.34
SENP3-206ENST00000581093 NDE1Q9NXR1 346 aa6.66□□□□□ -1.34
SENP3-206ENST00000581093 DDX43Q9NXZ2 648 aaKnown RBP6.66□□□□□ -1.34
SENP3-206ENST00000581093 CACNA2D2Q9NY47 1150 aa6.66□□□□□ -1.34
SENP3-206ENST00000581093 NKIRAS1Q9NYS0 192 aa6.66□□□□□ -1.34
SENP3-206ENST00000581093 GDE1Q9NZC3 331 aa6.66□□□□□ -1.34
SENP3-206ENST00000581093 DNMT3LQ9UJW3 386 aa6.66□□□□□ -1.34
SENP3-206ENST00000581093 MAN1B1Q9UKM7 699 aa6.66□□□□□ -1.34
SENP3-206ENST00000581093 PCDHB7Q9Y5E2 793 aa6.66□□□□□ -1.34
SENP3-206ENST00000581093 URB1O60287 2271 aaKnown RBP6.66□□□□□ -1.34
SENP3-206ENST00000581093 PLIN4Q96Q06 1357 aa6.66□□□□□ -1.34
SENP3-206ENST00000581093 ABCA12Q86UK0 2595 aa6.65□□□□□ -1.34
SENP3-206ENST00000581093 ANKRD17O75179 2603 aaKnown RBP6.65□□□□□ -1.34
SENP3-206ENST00000581093 NOTCH2Q04721 2471 aa6.65□□□□□ -1.34
SENP3-206ENST00000581093 SYCE3A1L190 88 aa6.65□□□□□ -1.34
SENP3-206ENST00000581093 SH3PXD2BA1X283 911 aa6.65□□□□□ -1.34
SENP3-206ENST00000581093 FAM170BA6NMN3 283 aa6.65□□□□□ -1.34
SENP3-206ENST00000581093 F8W036 122 aa6.65□□□□□ -1.34
SENP3-206ENST00000581093 ACKR2O00590 384 aa6.65□□□□□ -1.34
SENP3-206ENST00000581093 TOR1AO14656 332 aa6.65□□□□□ -1.34
SENP3-206ENST00000581093 PRODHO43272 600 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms