RNA–Protein interactions for RNA: ENST00000580798.1

SMG8-205, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG8, Length 583 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-205ENST00000580798 HDHD2Q9H0R4 259 aa3.98□□□□□ -1.77
SMG8-205ENST00000580798 CXorf36Q9H7Y0 433 aa3.98□□□□□ -1.77
SMG8-205ENST00000580798 TMEM206Q9H813 350 aa3.98□□□□□ -1.77
SMG8-205ENST00000580798 MRM3Q9HC36 420 aaKnown RBP3.98□□□□□ -1.77
SMG8-205ENST00000580798 IL26Q9NPH9 171 aa3.98□□□□□ -1.77
SMG8-205ENST00000580798 PPANQ9NQ55 473 aaKnown RBP3.98□□□□□ -1.77
SMG8-205ENST00000580798 CHRAC1Q9NRG0 131 aa3.98□□□□□ -1.77
SMG8-205ENST00000580798 KLHL28Q9NXS3 571 aa3.98□□□□□ -1.77
SMG8-205ENST00000580798 CYP39A1Q9NYL5 469 aa3.98□□□□□ -1.77
SMG8-205ENST00000580798 XPR1Q9UBH6 696 aa3.98□□□□□ -1.77
SMG8-205ENST00000580798 UXTQ9UBK9 157 aaPredicted RBP3.98□□□□□ -1.77
SMG8-205ENST00000580798 DBF4Q9UBU7 674 aaPredicted RBP3.98□□□□□ -1.77
SMG8-205ENST00000580798 LIMA1Q9UHB6 759 aaKnown RBP3.98□□□□□ -1.77
SMG8-205ENST00000580798 CNOT7Q9UIV1 285 aaKnown RBP3.98□□□□□ -1.77
SMG8-205ENST00000580798 CAPN11Q9UMQ6 739 aa3.98□□□□□ -1.77
SMG8-205ENST00000580798 SHOC2Q9UQ13 582 aa3.98□□□□□ -1.77
SMG8-205ENST00000580798 MRPS2Q9Y399 296 aaKnown RBP3.98□□□□□ -1.77
SMG8-205ENST00000580798 STRAPQ9Y3F4 350 aaKnown RBP3.98□□□□□ -1.77
SMG8-205ENST00000580798 NPHP3Q7Z494 1330 aa3.97□□□□□ -1.77
SMG8-205ENST00000580798 TCF20Q9UGU0 1960 aaKnown RBP3.97□□□□□ -1.77
SMG8-205ENST00000580798 TRBC2A0A5B9 178 aa3.97□□□□□ -1.77
SMG8-205ENST00000580798 GSAPA4D1B5 854 aa3.97□□□□□ -1.77
SMG8-205ENST00000580798 SLC15A5A6NIM6 579 aa3.97□□□□□ -1.77
SMG8-205ENST00000580798 TMEM210A6NLX4 147 aa3.97□□□□□ -1.77
SMG8-205ENST00000580798 OR5K4A6NMS3 321 aa3.97□□□□□ -1.77
SMG8-205ENST00000580798 GOLGA8KD6RF30 607 aa3.97□□□□□ -1.77
SMG8-205ENST00000580798 POC1B-GALNT4F8VUJ3 575 aa3.97□□□□□ -1.77
SMG8-205ENST00000580798 PSMD11O00231 422 aa3.97□□□□□ -1.77
SMG8-205ENST00000580798 SSX5O60225 188 aa3.97□□□□□ -1.77
SMG8-205ENST00000580798 SCGB2A1O75556 95 aa3.97□□□□□ -1.77
SMG8-205ENST00000580798 SERPINI2O75830 405 aa3.97□□□□□ -1.77
SMG8-205ENST00000580798 RECQL5O94762 991 aaPredicted RBP3.97□□□□□ -1.77
SMG8-205ENST00000580798 MFN2O95140 757 aa3.97□□□□□ -1.77
SMG8-205ENST00000580798 TGFAP01135 160 aa3.97□□□□□ -1.77
SMG8-205ENST00000580798 FGBP02675 491 aa3.97□□□□□ -1.77
SMG8-205ENST00000580798 KRT6BP04259 564 aa3.97□□□□□ -1.77
SMG8-205ENST00000580798 GLAP06280 429 aa3.97□□□□□ -1.77
SMG8-205ENST00000580798 TUBBP07437 444 aa3.97□□□□□ -1.77
SMG8-205ENST00000580798 CHRM5P08912 532 aaPredicted RBP3.97□□□□□ -1.77
SMG8-205ENST00000580798 CNPP09543 421 aaKnown RBP3.97□□□□□ -1.77
SMG8-205ENST00000580798 KITP10721 976 aa3.97□□□□□ -1.77
SMG8-205ENST00000580798 ODC1P11926 461 aa3.97□□□□□ -1.77
SMG8-205ENST00000580798 ALADP13716 330 aa3.97□□□□□ -1.77
SMG8-205ENST00000580798 FOSL2P15408 326 aa3.97□□□□□ -1.77
SMG8-205ENST00000580798 CYP2A7P20853 494 aa3.97□□□□□ -1.77
SMG8-205ENST00000580798 CPN2P22792 545 aa3.97□□□□□ -1.77
SMG8-205ENST00000580798 AHCYP23526 432 aa3.97□□□□□ -1.77
SMG8-205ENST00000580798 RPA1P27694 616 aa3.97□□□□□ -1.77
SMG8-205ENST00000580798 ADORA2AP29274 412 aa3.97□□□□□ -1.77
SMG8-205ENST00000580798 CTNNB1P35222 781 aa3.97□□□□□ -1.77
SMG8-205ENST00000580798 SPAM1P38567 509 aa3.97□□□□□ -1.77
SMG8-205ENST00000580798 PPP1R2P41236 205 aa3.97□□□□□ -1.77
SMG8-205ENST00000580798 KRT6CP48668 564 aa3.97□□□□□ -1.77
SMG8-205ENST00000580798 CCT3P49368 545 aaKnown RBP3.97□□□□□ -1.77
SMG8-205ENST00000580798 KHKP50053 298 aa3.97□□□□□ -1.77
SMG8-205ENST00000580798 SUMO3P55854 103 aaPredicted RBP3.97□□□□□ -1.77
SMG8-205ENST00000580798 NME5P56597 212 aa3.97□□□□□ -1.77
SMG8-205ENST00000580798 EEF1A1P68104 462 aaKnown RBP3.97□□□□□ -1.77
SMG8-205ENST00000580798 TUBB4BP68371 445 aa3.97□□□□□ -1.77
SMG8-205ENST00000580798 PMP22Q01453 160 aa3.97□□□□□ -1.77
SMG8-205ENST00000580798 TNFRSF17Q02223 184 aa3.97□□□□□ -1.77
SMG8-205ENST00000580798 EEF1A2Q05639 463 aaKnown RBP3.97□□□□□ -1.77
SMG8-205ENST00000580798 XRCC4Q13426 336 aa3.97□□□□□ -1.77
SMG8-205ENST00000580798 TUBB2AQ13885 445 aa3.97□□□□□ -1.77
SMG8-205ENST00000580798 USF2Q15853 346 aaPredicted RBP3.97□□□□□ -1.77
SMG8-205ENST00000580798 DECR1Q16698 335 aa3.97□□□□□ -1.77
SMG8-205ENST00000580798 CERKLQ49MI3 558 aaPredicted RBP3.97□□□□□ -1.77
SMG8-205ENST00000580798 FAM98BQ52LJ0 330 aaKnown RBP3.97□□□□□ -1.77
SMG8-205ENST00000580798 ZRANB3Q5FWF4 1079 aa3.97□□□□□ -1.77
SMG8-205ENST00000580798 FAM76BQ5HYJ3 339 aa3.97□□□□□ -1.77
SMG8-205ENST00000580798 KHDC1LQ5JSQ8 128 aa3.97□□□□□ -1.77
SMG8-205ENST00000580798 SAPCD1Q5SSQ6 148 aa3.97□□□□□ -1.77
SMG8-205ENST00000580798 ARMC12Q5T9G4 340 aa3.97□□□□□ -1.77
SMG8-205ENST00000580798 GRTP1Q5TC63 336 aa3.97□□□□□ -1.77
SMG8-205ENST00000580798 EEF1A1P5Q5VTE0 462 aa3.97□□□□□ -1.77
SMG8-205ENST00000580798 PPP1R2P3Q6NXS1 205 aa3.97□□□□□ -1.77
SMG8-205ENST00000580798 PMF1Q6P1K2 205 aa3.97□□□□□ -1.77
SMG8-205ENST00000580798 INO80CQ6PI98 192 aaPredicted RBP3.97□□□□□ -1.77
SMG8-205ENST00000580798 DPY19L3Q6ZPD9 716 aa3.97□□□□□ -1.77
SMG8-205ENST00000580798 Q6ZTC4 211 aa3.97□□□□□ -1.77
SMG8-205ENST00000580798 RNF44Q7L0R7 432 aa3.97□□□□□ -1.77
SMG8-205ENST00000580798 COL23A1Q86Y22 540 aaPredicted RBP3.97□□□□□ -1.77
SMG8-205ENST00000580798 ZNF280BQ86YH2 543 aa3.97□□□□□ -1.77
SMG8-205ENST00000580798 LRRC34Q8IZ02 419 aa3.97□□□□□ -1.77
SMG8-205ENST00000580798 GALNT4Q8N4A0 578 aa3.97□□□□□ -1.77
SMG8-205ENST00000580798 CSGALNACT2Q8N6G5 542 aa3.97□□□□□ -1.77
SMG8-205ENST00000580798 PLD5Q8N7P1 536 aa3.97□□□□□ -1.77
SMG8-205ENST00000580798 OR52J3Q8NH60 311 aa3.97□□□□□ -1.77
SMG8-205ENST00000580798 TEX47Q8TBZ9 253 aa3.97□□□□□ -1.77
SMG8-205ENST00000580798 NCSTNQ92542 709 aa3.97□□□□□ -1.77
SMG8-205ENST00000580798 GTF3C6Q969F1 213 aa3.97□□□□□ -1.77
SMG8-205ENST00000580798 AZIN2Q96A70 460 aa3.97□□□□□ -1.77
SMG8-205ENST00000580798 SAAL1Q96ER3 474 aa3.97□□□□□ -1.77
SMG8-205ENST00000580798 SNX27Q96L92 541 aa3.97□□□□□ -1.77
SMG8-205ENST00000580798 NSMCE2Q96MF7 247 aa3.97□□□□□ -1.77
SMG8-205ENST00000580798 PKP2Q99959 881 aa3.97□□□□□ -1.77
SMG8-205ENST00000580798 SEMA3CQ99985 751 aa3.97□□□□□ -1.77
SMG8-205ENST00000580798 RTKNQ9BST9 563 aa3.97□□□□□ -1.77
SMG8-205ENST00000580798 EFHD1Q9BUP0 239 aa3.97□□□□□ -1.77
SMG8-205ENST00000580798 NTMT1Q9BV86 223 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms