RNA–Protein interactions for RNA: ENST00000580182.5

PPP4R1-215, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-215ENST00000580182 ANKRD11Q6UB99 2663 aaPredicted RBP18.2■□□□□ 0.5
PPP4R1-215ENST00000580182 FAM237BA0A1B0GVD1 139 aa18.2■□□□□ 0.5
PPP4R1-215ENST00000580182 SLC5A10A0PJK1 596 aa18.2■□□□□ 0.5
PPP4R1-215ENST00000580182 EFCAB7A8K855 629 aa18.2■□□□□ 0.5
PPP4R1-215ENST00000580182 C9orf172C9J069 976 aa18.2■□□□□ 0.5
PPP4R1-215ENST00000580182 CCDC188H7C350 402 aa18.2■□□□□ 0.5
PPP4R1-215ENST00000580182 LIN7AO14910 233 aaPredicted RBP18.2■□□□□ 0.5
PPP4R1-215ENST00000580182 TTI1O43156 1089 aa18.2■□□□□ 0.5
PPP4R1-215ENST00000580182 KIF1CO43896 1103 aaKnown RBP18.2■□□□□ 0.5
PPP4R1-215ENST00000580182 BANF1O75531 89 aa18.2■□□□□ 0.5
PPP4R1-215ENST00000580182 F7P08709 466 aaPredicted RBP18.2■□□□□ 0.5
PPP4R1-215ENST00000580182 GSTM1P09488 218 aa18.2■□□□□ 0.5
PPP4R1-215ENST00000580182 CCR7P32248 378 aa18.2■□□□□ 0.5
PPP4R1-215ENST00000580182 PPARGP37231 505 aaPredicted RBP18.2■□□□□ 0.5
PPP4R1-215ENST00000580182 MLLT3P42568 568 aaPredicted RBP18.2■□□□□ 0.5
PPP4R1-215ENST00000580182 TTPAP49638 278 aa18.2■□□□□ 0.5
PPP4R1-215ENST00000580182 MRPS25P82663 173 aaKnown RBP18.2■□□□□ 0.5
PPP4R1-215ENST00000580182 GSTM4Q03013 218 aa18.2■□□□□ 0.5
PPP4R1-215ENST00000580182 DHX34Q14147 1143 aaKnown RBP18.2■□□□□ 0.5
PPP4R1-215ENST00000580182 KRT33BQ14525 404 aa18.2■□□□□ 0.5
PPP4R1-215ENST00000580182 ZNF248Q8NDW4 579 aa18.2■□□□□ 0.5
PPP4R1-215ENST00000580182 CRELD1Q96HD1 420 aa18.2■□□□□ 0.5
PPP4R1-215ENST00000580182 C9orf72Q96LT7 481 aa18.2■□□□□ 0.5
PPP4R1-215ENST00000580182 FERD3LQ96RJ6 166 aa18.2■□□□□ 0.5
PPP4R1-215ENST00000580182 KRT12Q99456 494 aa18.2■□□□□ 0.5
PPP4R1-215ENST00000580182 P2RY12Q9H244 342 aa18.2■□□□□ 0.5
PPP4R1-215ENST00000580182 KIR3DX1Q9H7L2 352 aa18.2■□□□□ 0.5
PPP4R1-215ENST00000580182 FOXJ2Q9P0K8 574 aa18.2■□□□□ 0.5
PPP4R1-215ENST00000580182 RNF14Q9UBS8 474 aa18.2■□□□□ 0.5
PPP4R1-215ENST00000580182 PCDHGA7Q9Y5G6 932 aa18.2■□□□□ 0.5
PPP4R1-215ENST00000580182 MAD1L1Q9Y6D9 718 aa18.2■□□□□ 0.5
PPP4R1-215ENST00000580182 RPS6KL1Q9Y6S9 549 aa18.2■□□□□ 0.5
PPP4R1-215ENST00000580182 ZCWPW2A0A1B0GU75 182 aa18.19■□□□□ 0.5
PPP4R1-215ENST00000580182 BHMG1C9JSJ3 638 aaPredicted RBP18.19■□□□□ 0.5
PPP4R1-215ENST00000580182 IFRD1O00458 451 aaPredicted RBP18.19■□□□□ 0.5
PPP4R1-215ENST00000580182 PRMT5O14744 637 aaPredicted RBP18.19■□□□□ 0.5
PPP4R1-215ENST00000580182 RRP8O43159 456 aaKnown RBP18.19■□□□□ 0.5
PPP4R1-215ENST00000580182 NDUFS3O75489 264 aa18.19■□□□□ 0.5
PPP4R1-215ENST00000580182 CD151P48509 253 aa18.19■□□□□ 0.5
PPP4R1-215ENST00000580182 CACNA1BQ00975 2339 aa18.19■□□□□ 0.5
PPP4R1-215ENST00000580182 RPA4Q13156 261 aa18.19■□□□□ 0.5
PPP4R1-215ENST00000580182 MSS51Q4VC12 460 aa18.19■□□□□ 0.5
PPP4R1-215ENST00000580182 IRGCQ6NXR0 463 aa18.19■□□□□ 0.5
PPP4R1-215ENST00000580182 FAM92BQ6ZTR7 304 aa18.19■□□□□ 0.5
PPP4R1-215ENST00000580182 TMEM135Q86UB9 458 aa18.19■□□□□ 0.5
PPP4R1-215ENST00000580182 PDZD3Q86UT5 571 aa18.19■□□□□ 0.5
PPP4R1-215ENST00000580182 FAM129CQ86XR2 697 aa18.19■□□□□ 0.5
PPP4R1-215ENST00000580182 TFGQ92734 400 aaPredicted RBP18.19■□□□□ 0.5
PPP4R1-215ENST00000580182 ART4Q93070 314 aa18.19■□□□□ 0.5
PPP4R1-215ENST00000580182 PWWP2AQ96N64 755 aa18.19■□□□□ 0.5
PPP4R1-215ENST00000580182 CARD6Q9BX69 1037 aa18.19■□□□□ 0.5
PPP4R1-215ENST00000580182 COLEC10Q9Y6Z7 277 aa18.19■□□□□ 0.5
PPP4R1-215ENST00000580182 UBA6A0AVT1 1052 aaPredicted RBP18.18■□□□□ 0.5
PPP4R1-215ENST00000580182 MAGEB16A2A368 324 aa18.18■□□□□ 0.5
PPP4R1-215ENST00000580182 NVLO15381 856 aaKnown RBP18.18■□□□□ 0.5
PPP4R1-215ENST00000580182 SEPHS1P49903 392 aa18.18■□□□□ 0.5
PPP4R1-215ENST00000580182 EIF3BP55884 814 aaKnown RBP18.18■□□□□ 0.5
PPP4R1-215ENST00000580182 DHX9Q08211 1270 aaKnown RBP18.18■□□□□ 0.5
PPP4R1-215ENST00000580182 PRKG2Q13237 762 aa18.18■□□□□ 0.5
PPP4R1-215ENST00000580182 TYSND1Q2T9J0 566 aa18.18■□□□□ 0.5
PPP4R1-215ENST00000580182 COL28A1Q2UY09 1125 aa18.18■□□□□ 0.5
PPP4R1-215ENST00000580182 SYTL3Q4VX76 610 aa18.18■□□□□ 0.5
PPP4R1-215ENST00000580182 ZNF789Q5FWF6 425 aa18.18■□□□□ 0.5
PPP4R1-215ENST00000580182 CTSL3PQ5NE16 218 aa18.18■□□□□ 0.5
PPP4R1-215ENST00000580182 ARMC3Q5W041 872 aa18.18■□□□□ 0.5
PPP4R1-215ENST00000580182 PTRHD1Q6GMV3 140 aaKnown RBP18.18■□□□□ 0.5
PPP4R1-215ENST00000580182 MRNIPQ6NTE8 343 aa18.18■□□□□ 0.5
PPP4R1-215ENST00000580182 NEPROQ6NW34 567 aa18.18■□□□□ 0.5
PPP4R1-215ENST00000580182 ZNF449Q6P9G9 518 aa18.18■□□□□ 0.5
PPP4R1-215ENST00000580182 LRRC69Q6ZNQ3 347 aa18.18■□□□□ 0.5
PPP4R1-215ENST00000580182 SYDE1Q6ZW31 735 aaPredicted RBP18.18■□□□□ 0.5
PPP4R1-215ENST00000580182 PCGF5Q86SE9 256 aa18.18■□□□□ 0.5
PPP4R1-215ENST00000580182 VRK3Q8IV63 474 aa18.18■□□□□ 0.5
PPP4R1-215ENST00000580182 SPACA3Q8IXA5 215 aa18.18■□□□□ 0.5
PPP4R1-215ENST00000580182 BMPERQ8N8U9 685 aa18.18■□□□□ 0.5
PPP4R1-215ENST00000580182 OR4E2Q8NGC2 313 aa18.18■□□□□ 0.5
PPP4R1-215ENST00000580182 ZFPM2Q8WW38 1151 aa18.18■□□□□ 0.5
PPP4R1-215ENST00000580182 KCNE4Q8WWG9 221 aa18.18■□□□□ 0.5
PPP4R1-215ENST00000580182 RUNDC3BQ96NL0 473 aa18.18■□□□□ 0.5
PPP4R1-215ENST00000580182 TRIM31Q9BZY9 425 aa18.18■□□□□ 0.5
PPP4R1-215ENST00000580182 CDYLQ9Y232 598 aa18.18■□□□□ 0.5
PPP4R1-215ENST00000580182 HEBP2Q9Y5Z4 205 aa18.18■□□□□ 0.5
PPP4R1-215ENST00000580182 PKD1L2Q7Z442 2459 aa18.17■□□□□ 0.5
PPP4R1-215ENST00000580182 OR6C74A6NCV1 312 aa18.17■□□□□ 0.5
PPP4R1-215ENST00000580182 OR5K3A6NET4 321 aa18.17■□□□□ 0.5
PPP4R1-215ENST00000580182 RASSF9O75901 435 aa18.17■□□□□ 0.5
PPP4R1-215ENST00000580182 PAMP19021 973 aa18.17■□□□□ 0.5
PPP4R1-215ENST00000580182 RPS3P23396 243 aaKnown RBP eCLIP18.17■□□□□ 0.5
PPP4R1-215ENST00000580182 ACADLP28330 430 aa18.17■□□□□ 0.5
PPP4R1-215ENST00000580182 FMO4P31512 558 aa18.17■□□□□ 0.5
PPP4R1-215ENST00000580182 C2orf54Q08AI8 447 aa18.17■□□□□ 0.5
PPP4R1-215ENST00000580182 HSPA14Q0VDF9 509 aa18.17■□□□□ 0.5
PPP4R1-215ENST00000580182 CENPUQ71F23 418 aa18.17■□□□□ 0.5
PPP4R1-215ENST00000580182 SDCCAG8Q86SQ7 713 aaPredicted RBP18.17■□□□□ 0.5
PPP4R1-215ENST00000580182 HOOK3Q86VS8 718 aa18.17■□□□□ 0.5
PPP4R1-215ENST00000580182 ZFAND4Q86XD8 727 aa18.17■□□□□ 0.5
PPP4R1-215ENST00000580182 UNC5BQ8IZJ1 945 aa18.17■□□□□ 0.5
PPP4R1-215ENST00000580182 ACVR1CQ8NER5 493 aa18.17■□□□□ 0.5
PPP4R1-215ENST00000580182 OR52E1Q8NGJ3 308 aa18.17■□□□□ 0.5
PPP4R1-215ENST00000580182 OR5AR1Q8NGP9 310 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms