RNA–Protein interactions for RNA: ENST00000580158.1

KPNB1-209, Transcript of karyopherin subunit beta 1, human

TSL 2

Gene KPNB1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KPNB1-209	ENST00000580158	NPY6R	Q99463	290 aa		5.82	□□□□□ -1.48
KPNB1-209	ENST00000580158	CD180	Q99467	661 aa		5.82	□□□□□ -1.48
KPNB1-209	ENST00000580158	MAP3K3	Q99759	626 aa		5.82	□□□□□ -1.48
KPNB1-209	ENST00000580158	LHPP	Q9H008	270 aa		5.82	□□□□□ -1.48
KPNB1-209	ENST00000580158	OSGEPL1	Q9H4B0	414 aa		5.82	□□□□□ -1.48
KPNB1-209	ENST00000580158	RMI1	Q9H9A7	625 aa		5.82	□□□□□ -1.48
KPNB1-209	ENST00000580158	KCNJ16	Q9NPI9	418 aa		5.82	□□□□□ -1.48
KPNB1-209	ENST00000580158	PLCB1	Q9NQ66	1216 aa		5.82	□□□□□ -1.48
KPNB1-209	ENST00000580158	POT1	Q9NUX5	634 aa		5.82	□□□□□ -1.48
KPNB1-209	ENST00000580158	EXOC1	Q9NV70	894 aa		5.82	□□□□□ -1.48
KPNB1-209	ENST00000580158	TMEM248	Q9NWD8	314 aa		5.82	□□□□□ -1.48
KPNB1-209	ENST00000580158	SOHLH2	Q9NX45	425 aa		5.82	□□□□□ -1.48
KPNB1-209	ENST00000580158	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	5.82	□□□□□ -1.48
KPNB1-209	ENST00000580158	SEMA5B	Q9P283	1151 aa		5.82	□□□□□ -1.48
KPNB1-209	ENST00000580158	NDOR1	Q9UHB4	597 aa		5.82	□□□□□ -1.48
KPNB1-209	ENST00000580158	FOXD3	Q9UJU5	478 aa	Predicted RBP	5.82	□□□□□ -1.48
KPNB1-209	ENST00000580158	COQ4	Q9Y3A0	265 aa		5.82	□□□□□ -1.48
KPNB1-209	ENST00000580158	ACTL7B	Q9Y614	415 aa		5.82	□□□□□ -1.48
KPNB1-209	ENST00000580158	PHF3	Q92576	2039 aa	Known RBP	5.82	□□□□□ -1.48
KPNB1-209	ENST00000580158	CPAMD8	Q8IZJ3	1885 aa		5.81	□□□□□ -1.48
KPNB1-209	ENST00000580158		A0A096LPE4	126 aa		5.81	□□□□□ -1.48
KPNB1-209	ENST00000580158	FAM237B	A0A1B0GVD1	139 aa		5.81	□□□□□ -1.48
KPNB1-209	ENST00000580158		A0A1W2PPZ6	126 aa		5.81	□□□□□ -1.48
KPNB1-209	ENST00000580158		A0A1W2PQ67	120 aa		5.81	□□□□□ -1.48
KPNB1-209	ENST00000580158	CCDC66	A2RUB6	948 aa		5.81	□□□□□ -1.48
KPNB1-209	ENST00000580158		E9PLN8	166 aa		5.81	□□□□□ -1.48
KPNB1-209	ENST00000580158	PSMD11	O00231	422 aa		5.81	□□□□□ -1.48
KPNB1-209	ENST00000580158	SOCS6	O14544	535 aa		5.81	□□□□□ -1.48
KPNB1-209	ENST00000580158	ARHGEF9	O43307	516 aa		5.81	□□□□□ -1.48
KPNB1-209	ENST00000580158	DNAJC6	O75061	913 aa		5.81	□□□□□ -1.48
KPNB1-209	ENST00000580158	CTAG2	O75638	210 aa		5.81	□□□□□ -1.48
KPNB1-209	ENST00000580158	ZBTB11	O95625	1053 aa	Predicted RBP	5.81	□□□□□ -1.48
KPNB1-209	ENST00000580158	CALCA	P01258	141 aa		5.81	□□□□□ -1.48
KPNB1-209	ENST00000580158	RAF1	P04049	648 aa		5.81	□□□□□ -1.48
KPNB1-209	ENST00000580158	EPB41	P11171	864 aa	Known RBP	5.81	□□□□□ -1.48
KPNB1-209	ENST00000580158	ABO	P16442	354 aa		5.81	□□□□□ -1.48
KPNB1-209	ENST00000580158	MST1	P26927	711 aa		5.81	□□□□□ -1.48
KPNB1-209	ENST00000580158	CASP1	P29466	404 aa		5.81	□□□□□ -1.48
KPNB1-209	ENST00000580158	VIPR1	P32241	457 aa		5.81	□□□□□ -1.48
KPNB1-209	ENST00000580158	SLC6A3	Q01959	620 aa		5.81	□□□□□ -1.48
KPNB1-209	ENST00000580158	RUNX1T1	Q06455	604 aa		5.81	□□□□□ -1.48
KPNB1-209	ENST00000580158	DPT	Q07507	201 aa		5.81	□□□□□ -1.48
KPNB1-209	ENST00000580158	PCDH1	Q08174	1060 aa		5.81	□□□□□ -1.48
KPNB1-209	ENST00000580158	PDCL	Q13371	301 aa		5.81	□□□□□ -1.48
KPNB1-209	ENST00000580158	CYTH1	Q15438	398 aa		5.81	□□□□□ -1.48
KPNB1-209	ENST00000580158	CNGA3	Q16281	694 aa		5.81	□□□□□ -1.48
KPNB1-209	ENST00000580158	KRTCAP3	Q53RY4	240 aa		5.81	□□□□□ -1.48
KPNB1-209	ENST00000580158	DNTTIP2	Q5QJE6	756 aa	Known RBP	5.81	□□□□□ -1.48
KPNB1-209	ENST00000580158	PRAMEF17	Q5VTA0	474 aa		5.81	□□□□□ -1.48
KPNB1-209	ENST00000580158	DENND1B	Q6P3S1	775 aa		5.81	□□□□□ -1.48
KPNB1-209	ENST00000580158		Q6ZPB1	254 aa	Predicted RBP	5.81	□□□□□ -1.48
KPNB1-209	ENST00000580158		Q6ZVL8	140 aa		5.81	□□□□□ -1.48
KPNB1-209	ENST00000580158	SRL	Q86TD4	932 aa		5.81	□□□□□ -1.48
KPNB1-209	ENST00000580158	NOP9	Q86U38	636 aa	Known RBP	5.81	□□□□□ -1.48
KPNB1-209	ENST00000580158	TRIM74	Q86UV6	250 aa		5.81	□□□□□ -1.48
KPNB1-209	ENST00000580158	PPM1K	Q8N3J5	372 aa		5.81	□□□□□ -1.48
KPNB1-209	ENST00000580158	KIAA0895	Q8NCT3	520 aa		5.81	□□□□□ -1.48
KPNB1-209	ENST00000580158	EXD1	Q8NHP7	514 aa		5.81	□□□□□ -1.48
KPNB1-209	ENST00000580158	NACC2	Q96BF6	587 aa		5.81	□□□□□ -1.48
KPNB1-209	ENST00000580158	AP2M1	Q96CW1	435 aa		5.81	□□□□□ -1.48
KPNB1-209	ENST00000580158	CXorf40B	Q96DE9	158 aa		5.81	□□□□□ -1.48
KPNB1-209	ENST00000580158	PGAP3	Q96FM1	320 aa	Predicted RBP	5.81	□□□□□ -1.48
KPNB1-209	ENST00000580158	THOC3	Q96J01	351 aa	Known RBP	5.81	□□□□□ -1.48
KPNB1-209	ENST00000580158	VKORC1	Q9BQB6	163 aa		5.81	□□□□□ -1.48
KPNB1-209	ENST00000580158	RNF32	Q9H0A6	362 aa		5.81	□□□□□ -1.48
KPNB1-209	ENST00000580158	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	5.81	□□□□□ -1.48
KPNB1-209	ENST00000580158	CLEC4M	Q9H2X3	399 aa	Predicted RBP	5.81	□□□□□ -1.48
KPNB1-209	ENST00000580158	SYTL2	Q9HCH5	934 aa		5.81	□□□□□ -1.48
KPNB1-209	ENST00000580158	SLC6A20	Q9NP91	592 aa		5.81	□□□□□ -1.48
KPNB1-209	ENST00000580158	GPATCH2L	Q9NWQ4	482 aa		5.81	□□□□□ -1.48
KPNB1-209	ENST00000580158	IL17C	Q9P0M4	197 aa		5.81	□□□□□ -1.48
KPNB1-209	ENST00000580158	LRFN1	Q9P244	771 aa		5.81	□□□□□ -1.48
KPNB1-209	ENST00000580158	VPS18	Q9P253	973 aa		5.81	□□□□□ -1.48
KPNB1-209	ENST00000580158	LHX3	Q9UBR4	397 aa		5.81	□□□□□ -1.48
KPNB1-209	ENST00000580158	UBA2	Q9UBT2	640 aa	Predicted RBP	5.81	□□□□□ -1.48
KPNB1-209	ENST00000580158	B4GALT6	Q9UBX8	382 aa		5.81	□□□□□ -1.48
KPNB1-209	ENST00000580158	OR12D3	Q9UGF7	316 aa		5.81	□□□□□ -1.48
KPNB1-209	ENST00000580158	SERTAD3	Q9UJW9	196 aa		5.81	□□□□□ -1.48
KPNB1-209	ENST00000580158	PPT2	Q9UMR5	302 aa		5.81	□□□□□ -1.48
KPNB1-209	ENST00000580158	ZNF835	Q9Y2P0	537 aa		5.81	□□□□□ -1.48
KPNB1-209	ENST00000580158	PRKAB1	Q9Y478	270 aa		5.81	□□□□□ -1.48
KPNB1-209	ENST00000580158	MPDZ	O75970	2070 aa		5.81	□□□□□ -1.48
KPNB1-209	ENST00000580158	VPS13C	Q709C8	3753 aa		5.8	□□□□□ -1.48
KPNB1-209	ENST00000580158		I6L893	689 aa	Predicted RBP	5.8	□□□□□ -1.48
KPNB1-209	ENST00000580158	CRLF1	O75462	422 aa		5.8	□□□□□ -1.48
KPNB1-209	ENST00000580158	HEXIM1	O94992	359 aa	Known RBP	5.8	□□□□□ -1.48
KPNB1-209	ENST00000580158	LETM1	O95202	739 aa	Predicted RBP	5.8	□□□□□ -1.48
KPNB1-209	ENST00000580158	TSPAN12	O95859	305 aa		5.8	□□□□□ -1.48
KPNB1-209	ENST00000580158	UQCRH	P07919	91 aa		5.8	□□□□□ -1.48
KPNB1-209	ENST00000580158	CSNK1D	P48730	415 aa		5.8	□□□□□ -1.48
KPNB1-209	ENST00000580158	CLCNKA	P51800	687 aa		5.8	□□□□□ -1.48
KPNB1-209	ENST00000580158	YBEY	P58557	167 aa	Predicted RBP	5.8	□□□□□ -1.48
KPNB1-209	ENST00000580158	NKX6-1	P78426	367 aa	Predicted RBP	5.8	□□□□□ -1.48
KPNB1-209	ENST00000580158	CUL4B	Q13620	913 aa		5.8	□□□□□ -1.48
KPNB1-209	ENST00000580158	GPR18	Q14330	331 aa		5.8	□□□□□ -1.48
KPNB1-209	ENST00000580158	SYCP1	Q15431	976 aa		5.8	□□□□□ -1.48
KPNB1-209	ENST00000580158	CBWD6	Q4V339	395 aa		5.8	□□□□□ -1.48
KPNB1-209	ENST00000580158	DCAF17	Q5H9S7	520 aa	Predicted RBP	5.8	□□□□□ -1.48
KPNB1-209	ENST00000580158	CBWD3	Q5JTY5	395 aa		5.8	□□□□□ -1.48
KPNB1-209	ENST00000580158	CBWD5	Q5RIA9	395 aa		5.8	□□□□□ -1.48

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