RNA–Protein interactions for RNA: ENST00000578093.1

PTPRM-206, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 464 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-206ENST00000578093 AKIRIN1Q9H9L7 192 aaPredicted RBP3.9□□□□□ -1.79
PTPRM-206ENST00000578093 SP110Q9HB58 689 aa3.9□□□□□ -1.79
PTPRM-206ENST00000578093 CASS4Q9NQ75 786 aa3.9□□□□□ -1.79
PTPRM-206ENST00000578093 PHPT1Q9NRX4 125 aaPredicted RBP3.9□□□□□ -1.79
PTPRM-206ENST00000578093 GOLGA6AQ9NYA3 693 aa3.9□□□□□ -1.79
PTPRM-206ENST00000578093 FAM53CQ9NYF3 392 aa3.9□□□□□ -1.79
PTPRM-206ENST00000578093 TBC1D29Q9UFV1 150 aa3.9□□□□□ -1.79
PTPRM-206ENST00000578093 TMEFF2Q9UIK5 374 aaPredicted RBP3.9□□□□□ -1.79
PTPRM-206ENST00000578093 RWDD2AQ9UIY3 292 aa3.9□□□□□ -1.79
PTPRM-206ENST00000578093 ERRFI1Q9UJM3 462 aaPredicted RBP3.9□□□□□ -1.79
PTPRM-206ENST00000578093 TLK1Q9UKI8 766 aa3.9□□□□□ -1.79
PTPRM-206ENST00000578093 FZD10Q9ULW2 581 aa3.9□□□□□ -1.79
PTPRM-206ENST00000578093 SRPK3Q9UPE1 567 aa3.9□□□□□ -1.79
PTPRM-206ENST00000578093 KCNK6Q9Y257 313 aa3.9□□□□□ -1.79
PTPRM-206ENST00000578093 COA3Q9Y2R0 106 aaPredicted RBP3.9□□□□□ -1.79
PTPRM-206ENST00000578093 KCTD3Q9Y597 815 aa3.9□□□□□ -1.79
PTPRM-206ENST00000578093 HIVEP1P15822 2718 aa3.9□□□□□ -1.79
PTPRM-206ENST00000578093 POLQO75417 2590 aa3.9□□□□□ -1.79
PTPRM-206ENST00000578093 DIDO1Q9BTC0 2240 aaKnown RBP3.9□□□□□ -1.79
PTPRM-206ENST00000578093 OR14I1A6ND48 311 aa3.89□□□□□ -1.79
PTPRM-206ENST00000578093 WIPF3A6NGB9 483 aa3.89□□□□□ -1.79
PTPRM-206ENST00000578093 ENO4A6NNW6 628 aa3.89□□□□□ -1.79
PTPRM-206ENST00000578093 TCP11X1B4DZS4 312 aa3.89□□□□□ -1.79
PTPRM-206ENST00000578093 MKRN2OSH3BPM6 223 aa3.89□□□□□ -1.79
PTPRM-206ENST00000578093 DFFAO00273 331 aa3.89□□□□□ -1.79
PTPRM-206ENST00000578093 POLR1CO15160 346 aaPredicted RBP3.89□□□□□ -1.79
PTPRM-206ENST00000578093 HTRA2O43464 458 aaPredicted RBP3.89□□□□□ -1.79
PTPRM-206ENST00000578093 KRT86O43790 486 aa3.89□□□□□ -1.79
PTPRM-206ENST00000578093 KIF1CO43896 1103 aaKnown RBP3.89□□□□□ -1.79
PTPRM-206ENST00000578093 DNAJC6O75061 913 aa3.89□□□□□ -1.79
PTPRM-206ENST00000578093 VPS4BO75351 444 aa3.89□□□□□ -1.79
PTPRM-206ENST00000578093 KATNA1O75449 491 aa3.89□□□□□ -1.79
PTPRM-206ENST00000578093 PALMO75781 387 aa3.89□□□□□ -1.79
PTPRM-206ENST00000578093 KIAA0754O94854 1291 aa3.89□□□□□ -1.79
PTPRM-206ENST00000578093 ATP1A1P05023 1023 aaKnown RBP3.89□□□□□ -1.79
PTPRM-206ENST00000578093 PDHA1P08559 390 aa3.89□□□□□ -1.79
PTPRM-206ENST00000578093 UNGP13051 313 aaPredicted RBP3.89□□□□□ -1.79
PTPRM-206ENST00000578093 ACP5P13686 325 aa3.89□□□□□ -1.79
PTPRM-206ENST00000578093 UCHL3P15374 230 aa3.89□□□□□ -1.79
PTPRM-206ENST00000578093 TYRP1P17643 537 aa3.89□□□□□ -1.79
PTPRM-206ENST00000578093 TNFRSF8P28908 595 aa3.89□□□□□ -1.79
PTPRM-206ENST00000578093 LEPRP48357 1165 aaKnown RBP3.89□□□□□ -1.79
PTPRM-206ENST00000578093 CSNK1DP48730 415 aa3.89□□□□□ -1.79
PTPRM-206ENST00000578093 PPM1FP49593 454 aaPredicted RBP3.89□□□□□ -1.79
PTPRM-206ENST00000578093 SCNN1BP51168 640 aa3.89□□□□□ -1.79
PTPRM-206ENST00000578093 NDST2P52849 883 aa3.89□□□□□ -1.79
PTPRM-206ENST00000578093 JAM2P57087 298 aa3.89□□□□□ -1.79
PTPRM-206ENST00000578093 SNX16P57768 344 aa3.89□□□□□ -1.79
PTPRM-206ENST00000578093 TPI1P60174 286 aa3.89□□□□□ -1.79
PTPRM-206ENST00000578093 PPP1CAP62136 330 aa3.89□□□□□ -1.79
PTPRM-206ENST00000578093 UBE2IP63279 158 aaKnown RBP3.89□□□□□ -1.79
PTPRM-206ENST00000578093 HHEXQ03014 270 aa3.89□□□□□ -1.79
PTPRM-206ENST00000578093 BIRC2Q13490 618 aa3.89□□□□□ -1.79
PTPRM-206ENST00000578093 DNASE1L3Q13609 305 aa3.89□□□□□ -1.79
PTPRM-206ENST00000578093 LAMB3Q13751 1172 aa3.89□□□□□ -1.79
PTPRM-206ENST00000578093 GRM3Q14832 879 aa3.89□□□□□ -1.79
PTPRM-206ENST00000578093 NR1I3Q14994 352 aa3.89□□□□□ -1.79
PTPRM-206ENST00000578093 VWA3BQ502W6 1294 aa3.89□□□□□ -1.79
PTPRM-206ENST00000578093 PYCR3Q53H96 274 aa3.89□□□□□ -1.79
PTPRM-206ENST00000578093 FAM182AQ5T1J6 154 aa3.89□□□□□ -1.79
PTPRM-206ENST00000578093 ZNF648Q5T619 568 aaPredicted RBP3.89□□□□□ -1.79
PTPRM-206ENST00000578093 MROH9Q5TGP6 573 aa3.89□□□□□ -1.79
PTPRM-206ENST00000578093 KLHDC7AQ5VTJ3 777 aa3.89□□□□□ -1.79
PTPRM-206ENST00000578093 FAM69BQ5VUD6 431 aa3.89□□□□□ -1.79
PTPRM-206ENST00000578093 C1QL3Q5VWW1 255 aa3.89□□□□□ -1.79
PTPRM-206ENST00000578093 DENND5AQ6IQ26 1287 aa3.89□□□□□ -1.79
PTPRM-206ENST00000578093 CERS6Q6ZMG9 384 aa3.89□□□□□ -1.79
PTPRM-206ENST00000578093 MON1BQ7L1V2 547 aa3.89□□□□□ -1.79
PTPRM-206ENST00000578093 TECPR1Q7Z6L1 1165 aa3.89□□□□□ -1.79
PTPRM-206ENST00000578093 TICAM1Q8IUC6 712 aa3.89□□□□□ -1.79
PTPRM-206ENST00000578093 CCDC103Q8IW40 242 aa3.89□□□□□ -1.79
PTPRM-206ENST00000578093 FAM114A1Q8IWE2 563 aa3.89□□□□□ -1.79
PTPRM-206ENST00000578093 ELOA2Q8IYF1 753 aaPredicted RBP3.89□□□□□ -1.79
PTPRM-206ENST00000578093 ESX1Q8N693 406 aa3.89□□□□□ -1.79
PTPRM-206ENST00000578093 ARFGAP1Q8N6T3 406 aa3.89□□□□□ -1.79
PTPRM-206ENST00000578093 PAF1Q8N7H5 531 aa3.89□□□□□ -1.79
PTPRM-206ENST00000578093 C3orf20Q8ND61 904 aa3.89□□□□□ -1.79
PTPRM-206ENST00000578093 OR10G6Q8NH81 332 aa3.89□□□□□ -1.79
PTPRM-206ENST00000578093 NCSTNQ92542 709 aa3.89□□□□□ -1.79
PTPRM-206ENST00000578093 RSC1A1Q92681 617 aa3.89□□□□□ -1.79
PTPRM-206ENST00000578093 AHCYL2Q96HN2 611 aaKnown RBP3.89□□□□□ -1.79
PTPRM-206ENST00000578093 COX14Q96I36 57 aa3.89□□□□□ -1.79
PTPRM-206ENST00000578093 ELMO2Q96JJ3 720 aa3.89□□□□□ -1.79
PTPRM-206ENST00000578093 MAGEB10Q96LZ2 347 aaPredicted RBP3.89□□□□□ -1.79
PTPRM-206ENST00000578093 OR6C1Q96RD1 312 aa3.89□□□□□ -1.79
PTPRM-206ENST00000578093 MCCC1Q96RQ3 725 aaPredicted RBP3.89□□□□□ -1.79
PTPRM-206ENST00000578093 WDR24Q96S15 920 aa3.89□□□□□ -1.79
PTPRM-206ENST00000578093 SLC38A3Q99624 504 aa3.89□□□□□ -1.79
PTPRM-206ENST00000578093 PLCD4Q9BRC7 762 aa3.89□□□□□ -1.79
PTPRM-206ENST00000578093 SNRNP25Q9BV90 132 aaKnown RBP3.89□□□□□ -1.79
PTPRM-206ENST00000578093 SELENOOQ9BVL4 669 aa3.89□□□□□ -1.79
PTPRM-206ENST00000578093 ULBP3Q9BZM4 244 aa3.89□□□□□ -1.79
PTPRM-206ENST00000578093 TRIM7Q9C029 511 aa3.89□□□□□ -1.79
PTPRM-206ENST00000578093 VPS16Q9H269 839 aa3.89□□□□□ -1.79
PTPRM-206ENST00000578093 NDST4Q9H3R1 872 aa3.89□□□□□ -1.79
PTPRM-206ENST00000578093 ZNF768Q9H5H4 540 aaKnown RBP3.89□□□□□ -1.79
PTPRM-206ENST00000578093 DHX35Q9H5Z1 703 aaKnown RBP3.89□□□□□ -1.79
PTPRM-206ENST00000578093 RETREG1Q9H6L5 497 aa3.89□□□□□ -1.79
PTPRM-206ENST00000578093 NOD2Q9HC29 1040 aa3.89□□□□□ -1.79
PTPRM-206ENST00000578093 ARFGAP3Q9NP61 516 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms