RNA–Protein interactions for RNA: ENST00000576484.1

CDC27-219, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-219ENST00000576484 VPS33BQ9H267 617 aa4.65□□□□□ -1.67
CDC27-219ENST00000576484 SLC35C2Q9NQQ7 365 aa4.65□□□□□ -1.67
CDC27-219ENST00000576484 PPIEQ9UNP9 301 aaKnown RBP4.65□□□□□ -1.67
CDC27-219ENST00000576484 JRKLQ9Y4A0 524 aa4.65□□□□□ -1.67
CDC27-219ENST00000576484 FEZF1A0PJY2 475 aa4.64□□□□□ -1.67
CDC27-219ENST00000576484 ELOVL7A1L3X0 281 aa4.64□□□□□ -1.67
CDC27-219ENST00000576484 XRCC3O43542 346 aa4.64□□□□□ -1.67
CDC27-219ENST00000576484 TOMM70O94826 608 aa4.64□□□□□ -1.67
CDC27-219ENST00000576484 CSPG5O95196 566 aa4.64□□□□□ -1.67
CDC27-219ENST00000576484 H1F0P07305 194 aaKnown RBP4.64□□□□□ -1.67
CDC27-219ENST00000576484 GJA1P17302 382 aa4.64□□□□□ -1.67
CDC27-219ENST00000576484 MSH3P20585 1137 aa4.64□□□□□ -1.67
CDC27-219ENST00000576484 DNASE1P24855 282 aa4.64□□□□□ -1.67
CDC27-219ENST00000576484 CDH13P55290 713 aa4.64□□□□□ -1.67
CDC27-219ENST00000576484 LINC01547P58512 204 aaPredicted RBP4.64□□□□□ -1.67
CDC27-219ENST00000576484 PHEXP78562 749 aa4.64□□□□□ -1.67
CDC27-219ENST00000576484 CDK3Q00526 305 aa4.64□□□□□ -1.67
CDC27-219ENST00000576484 KRTAP24-1Q3LI83 254 aa4.64□□□□□ -1.67
CDC27-219ENST00000576484 CCNYL2Q5T2Q4 361 aa4.64□□□□□ -1.67
CDC27-219ENST00000576484 USP43Q70EL4 1123 aa4.64□□□□□ -1.67
CDC27-219ENST00000576484 ZNF595Q8IYB9 648 aa4.64□□□□□ -1.67
CDC27-219ENST00000576484 DNASE2BQ8WZ79 361 aa4.64□□□□□ -1.67
CDC27-219ENST00000576484 PTERQ96BW5 349 aa4.64□□□□□ -1.67
CDC27-219ENST00000576484 MTERF3Q96E29 417 aa4.64□□□□□ -1.67
CDC27-219ENST00000576484 TBC1D17Q9HA65 648 aa4.64□□□□□ -1.67
CDC27-219ENST00000576484 PELI2Q9HAT8 420 aa4.64□□□□□ -1.67
CDC27-219ENST00000576484 GDE1Q9NZC3 331 aa4.64□□□□□ -1.67
CDC27-219ENST00000576484 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.64□□□□□ -1.67
CDC27-219ENST00000576484 MORF4L1Q9UBU8 362 aa4.64□□□□□ -1.67
CDC27-219ENST00000576484 A0A0B4J293 547 aa4.63□□□□□ -1.67
CDC27-219ENST00000576484 hCG_1809904A0A1W2PP81 198 aa4.63□□□□□ -1.67
CDC27-219ENST00000576484 A0A1W2PPE2 198 aa4.63□□□□□ -1.67
CDC27-219ENST00000576484 A0A1W2PR64 198 aa4.63□□□□□ -1.67
CDC27-219ENST00000576484 P4HA2O15460 535 aa4.63□□□□□ -1.67
CDC27-219ENST00000576484 FIBPO43427 364 aa4.63□□□□□ -1.67
CDC27-219ENST00000576484 OR10H2O60403 315 aa4.63□□□□□ -1.67
CDC27-219ENST00000576484 NR3C1P04150 777 aa4.63□□□□□ -1.67
CDC27-219ENST00000576484 ABCB1P08183 1280 aaPredicted RBP4.63□□□□□ -1.67
CDC27-219ENST00000576484 PAX1P15863 534 aa4.63□□□□□ -1.67
CDC27-219ENST00000576484 NR2C2P49116 596 aa4.63□□□□□ -1.67
CDC27-219ENST00000576484 LMAN1P49257 510 aa4.63□□□□□ -1.67
CDC27-219ENST00000576484 LIG4P49917 911 aa4.63□□□□□ -1.67
CDC27-219ENST00000576484 IL11RAQ14626 422 aa4.63□□□□□ -1.67
CDC27-219ENST00000576484 WDR38Q5JTN6 314 aa4.63□□□□□ -1.67
CDC27-219ENST00000576484 GPR139Q6DWJ6 353 aa4.63□□□□□ -1.67
CDC27-219ENST00000576484 Q6ZTC4 211 aa4.63□□□□□ -1.67
CDC27-219ENST00000576484 TRMT1LQ7Z2T5 733 aaKnown RBP4.63□□□□□ -1.67
CDC27-219ENST00000576484 FAM114A1Q8IWE2 563 aa4.63□□□□□ -1.67
CDC27-219ENST00000576484 CEP57L1Q8IYX8 460 aa4.63□□□□□ -1.67
CDC27-219ENST00000576484 AVL9Q8NBF6 648 aa4.63□□□□□ -1.67
CDC27-219ENST00000576484 PAPD5Q8NDF8 572 aaKnown RBP4.63□□□□□ -1.67
CDC27-219ENST00000576484 OR10S1Q8NGN2 331 aa4.63□□□□□ -1.67
CDC27-219ENST00000576484 MS4A10Q96PG2 267 aa4.63□□□□□ -1.67
CDC27-219ENST00000576484 FNDC11Q9BVV2 318 aa4.63□□□□□ -1.67
CDC27-219ENST00000576484 GOLPH3LQ9H4A5 285 aa4.63□□□□□ -1.67
CDC27-219ENST00000576484 TXLNGQ9NUQ3 528 aa4.63□□□□□ -1.67
CDC27-219ENST00000576484 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.63□□□□□ -1.67
CDC27-219ENST00000576484 TRPV2Q9Y5S1 764 aa4.63□□□□□ -1.67
CDC27-219ENST00000576484 ANKUB1A6NFN9 424 aa4.62□□□□□ -1.67
CDC27-219ENST00000576484 MED24O75448 989 aa4.62□□□□□ -1.67
CDC27-219ENST00000576484 TSHBP01222 138 aa4.62□□□□□ -1.67
CDC27-219ENST00000576484 TIMP3P35625 211 aa4.62□□□□□ -1.67
CDC27-219ENST00000576484 MATR3P43243 847 aaKnown RBP eCLIP4.62□□□□□ -1.67
CDC27-219ENST00000576484 DMP1Q13316 513 aaPredicted RBP4.62□□□□□ -1.67
CDC27-219ENST00000576484 NR1D2Q14995 579 aa4.62□□□□□ -1.67
CDC27-219ENST00000576484 SNAPC1Q16533 368 aa4.62□□□□□ -1.67
CDC27-219ENST00000576484 TECRLQ5HYJ1 363 aa4.62□□□□□ -1.67
CDC27-219ENST00000576484 C9orf50Q5SZB4 431 aa4.62□□□□□ -1.67
CDC27-219ENST00000576484 MFSD4BQ5TF39 518 aa4.62□□□□□ -1.67
CDC27-219ENST00000576484 TMEM173Q86WV6 379 aaPredicted RBP4.62□□□□□ -1.67
CDC27-219ENST00000576484 GPALPP1Q8IXQ4 340 aa4.62□□□□□ -1.67
CDC27-219ENST00000576484 CPSF7Q8N684 471 aaKnown RBP4.62□□□□□ -1.67
CDC27-219ENST00000576484 OR2T12Q8NG77 320 aa4.62□□□□□ -1.67
CDC27-219ENST00000576484 CFAP61Q8NHU2 1237 aa4.62□□□□□ -1.67
CDC27-219ENST00000576484 STAMBPL1Q96FJ0 436 aa4.62□□□□□ -1.67
CDC27-219ENST00000576484 PSD2Q9BQI7 771 aa4.62□□□□□ -1.67
CDC27-219ENST00000576484 CCDC106Q9BWC9 280 aa4.62□□□□□ -1.67
CDC27-219ENST00000576484 ZBTB20Q9HC78 741 aaPredicted RBP4.62□□□□□ -1.67
CDC27-219ENST00000576484 ACKR4Q9NPB9 350 aa4.62□□□□□ -1.67
CDC27-219ENST00000576484 OLFML3Q9NRN5 406 aa4.62□□□□□ -1.67
CDC27-219ENST00000576484 FAM118AQ9NWS6 357 aa4.62□□□□□ -1.67
CDC27-219ENST00000576484 ANAPC2Q9UJX6 822 aa4.62□□□□□ -1.67
CDC27-219ENST00000576484 ACAD8Q9UKU7 415 aa4.62□□□□□ -1.67
CDC27-219ENST00000576484 MED19A0JLT2 244 aaPredicted RBP4.61□□□□□ -1.67
CDC27-219ENST00000576484 ERVV-2B6SEH9 535 aa4.61□□□□□ -1.67
CDC27-219ENST00000576484 NUCB1Q02818 461 aa4.61□□□□□ -1.67
CDC27-219ENST00000576484 HYAL1Q12794 435 aa4.61□□□□□ -1.67
CDC27-219ENST00000576484 CBWD6Q4V339 395 aa4.61□□□□□ -1.67
CDC27-219ENST00000576484 CBWD3Q5JTY5 395 aa4.61□□□□□ -1.67
CDC27-219ENST00000576484 TMPRSS11FQ6ZWK6 438 aa4.61□□□□□ -1.67
CDC27-219ENST00000576484 DGLUCYQ7Z3D6 616 aa4.61□□□□□ -1.67
CDC27-219ENST00000576484 ZNF329Q86UD4 541 aa4.61□□□□□ -1.67
CDC27-219ENST00000576484 LSMEM1Q8N8F7 131 aa4.61□□□□□ -1.67
CDC27-219ENST00000576484 POGLUT1Q8NBL1 392 aa4.61□□□□□ -1.67
CDC27-219ENST00000576484 MOSPD2Q8NHP6 518 aa4.61□□□□□ -1.67
CDC27-219ENST00000576484 FCAMRQ8WWV6 532 aa4.61□□□□□ -1.67
CDC27-219ENST00000576484 SLC47A1Q96FL8 570 aa4.61□□□□□ -1.67
CDC27-219ENST00000576484 EQTNQ9NQ60 294 aa4.61□□□□□ -1.67
CDC27-219ENST00000576484 NKIRAS2Q9NYR9 191 aa4.61□□□□□ -1.67
CDC27-219ENST00000576484 CLIC5Q9NZA1 410 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms