RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 ZBTB18Q99592 522 aa15.39■□□□□ 0.05
NUP88-207ENST00000573584 FEM1AQ9BSK4 669 aa15.39■□□□□ 0.05
NUP88-207ENST00000573584 TBCDQ9BTW9 1192 aa15.39■□□□□ 0.05
NUP88-207ENST00000573584 FUNDC2Q9BWH2 189 aa15.39■□□□□ 0.05
NUP88-207ENST00000573584 IPPKQ9H8X2 491 aa15.39■□□□□ 0.05
NUP88-207ENST00000573584 ACTR8Q9H981 624 aa15.39■□□□□ 0.05
NUP88-207ENST00000573584 PSMA3P25788 255 aa15.38■□□□□ 0.05
NUP88-207ENST00000573584 CD47Q08722 323 aa15.38■□□□□ 0.05
NUP88-207ENST00000573584 KCNAB2Q13303 367 aa15.38■□□□□ 0.05
NUP88-207ENST00000573584 KIAA0040Q15053 153 aa15.38■□□□□ 0.05
NUP88-207ENST00000573584 PCBP2Q15366 365 aaKnown RBP eCLIP15.38■□□□□ 0.05
NUP88-207ENST00000573584 CTU2Q2VPK5 515 aaKnown RBP15.38■□□□□ 0.05
NUP88-207ENST00000573584 SPESP1Q6UW49 350 aa15.38■□□□□ 0.05
NUP88-207ENST00000573584 GLB1LQ6UWU2 654 aa15.38■□□□□ 0.05
NUP88-207ENST00000573584 MILR1Q7Z6M3 343 aa15.38■□□□□ 0.05
NUP88-207ENST00000573584 NAT16Q8N8M0 369 aa15.38■□□□□ 0.05
NUP88-207ENST00000573584 ZNF548Q8NEK5 533 aaPredicted RBP15.38■□□□□ 0.05
NUP88-207ENST00000573584 GIPC2Q8TF65 315 aa15.38■□□□□ 0.05
NUP88-207ENST00000573584 RBM4BQ9BQ04 359 aaKnown RBP15.38■□□□□ 0.05
NUP88-207ENST00000573584 RBM4Q9BWF3 364 aaKnown RBP15.38■□□□□ 0.05
NUP88-207ENST00000573584 BAG5Q9UL15 447 aa15.38■□□□□ 0.05
NUP88-207ENST00000573584 RAI2Q9Y5P3 530 aa15.38■□□□□ 0.05
NUP88-207ENST00000573584 PTGES3LE9PB15 166 aa15.38■□□□□ 0.05
NUP88-207ENST00000573584 GPR39O43194 453 aa15.38■□□□□ 0.05
NUP88-207ENST00000573584 TLR5O60602 858 aa15.38■□□□□ 0.05
NUP88-207ENST00000573584 BCAS1O75363 584 aaPredicted RBP15.38■□□□□ 0.05
NUP88-207ENST00000573584 ESR1P03372 595 aa15.38■□□□□ 0.05
NUP88-207ENST00000573584 CR2P20023 1033 aa15.38■□□□□ 0.05
NUP88-207ENST00000573584 AGXTP21549 392 aa15.38■□□□□ 0.05
NUP88-207ENST00000573584 SLC6A4P31645 630 aa15.38■□□□□ 0.05
NUP88-207ENST00000573584 AKT1P31749 480 aa15.38■□□□□ 0.05
NUP88-207ENST00000573584 CLCN7P51798 805 aa15.38■□□□□ 0.05
NUP88-207ENST00000573584 RPL38P63173 70 aaKnown RBP15.38■□□□□ 0.05
NUP88-207ENST00000573584 CYP4F3Q08477 520 aa15.38■□□□□ 0.05
NUP88-207ENST00000573584 SPCS2Q15005 226 aa15.38■□□□□ 0.05
NUP88-207ENST00000573584 MAPKAPK3Q16644 382 aa15.38■□□□□ 0.05
NUP88-207ENST00000573584 FAM174BQ3ZCQ3 159 aa15.38■□□□□ 0.05
NUP88-207ENST00000573584 CTXN3Q4LDR2 81 aa15.38■□□□□ 0.05
NUP88-207ENST00000573584 LDLRAP1Q5SW96 308 aa15.38■□□□□ 0.05
NUP88-207ENST00000573584 EGFLAMQ63HQ2 1017 aa15.38■□□□□ 0.05
NUP88-207ENST00000573584 RNF168Q8IYW5 571 aaPredicted RBP15.38■□□□□ 0.05
NUP88-207ENST00000573584 TRPV1Q8NER1 839 aa15.38■□□□□ 0.05
NUP88-207ENST00000573584 PJA1Q8NG27 643 aa15.38■□□□□ 0.05
NUP88-207ENST00000573584 GTF2H4Q92759 462 aa15.38■□□□□ 0.05
NUP88-207ENST00000573584 FAM162AQ96A26 154 aa15.38■□□□□ 0.05
NUP88-207ENST00000573584 FKBP10Q96AY3 582 aa15.38■□□□□ 0.05
NUP88-207ENST00000573584 IKZF5Q9H5V7 419 aa15.38■□□□□ 0.05
NUP88-207ENST00000573584 ARMC7Q9H6L4 198 aa15.38■□□□□ 0.05
NUP88-207ENST00000573584 AGO1Q9UL18 857 aaKnown RBP15.38■□□□□ 0.05
NUP88-207ENST00000573584 ZFP37Q9Y6Q3 630 aaPredicted RBP15.38■□□□□ 0.05
NUP88-207ENST00000573584 DGKBQ9Y6T7 804 aa15.38■□□□□ 0.05
NUP88-207ENST00000573584 ANKRD66B4E2M5 251 aa15.37■□□□□ 0.05
NUP88-207ENST00000573584 TSPAN3O60637 253 aa15.37■□□□□ 0.05
NUP88-207ENST00000573584 PRKD3O94806 890 aa15.37■□□□□ 0.05
NUP88-207ENST00000573584 OTCP00480 354 aa15.37■□□□□ 0.05
NUP88-207ENST00000573584 PTGER3P43115 390 aa15.37■□□□□ 0.05
NUP88-207ENST00000573584 RBM23Q86U06 439 aaKnown RBP15.37■□□□□ 0.05
NUP88-207ENST00000573584 SVOPLQ8N434 492 aa15.37■□□□□ 0.05
NUP88-207ENST00000573584 ABHD11Q8NFV4 315 aa15.37■□□□□ 0.05
NUP88-207ENST00000573584 PPP3R2Q96LZ3 170 aa15.37■□□□□ 0.05
NUP88-207ENST00000573584 PAIP2BQ9ULR5 123 aaKnown RBP15.37■□□□□ 0.05
NUP88-207ENST00000573584 NOD1Q9Y239 953 aa15.37■□□□□ 0.05
NUP88-207ENST00000573584 EIF3LQ9Y262 564 aaKnown RBP15.37■□□□□ 0.05
NUP88-207ENST00000573584 B3GNT3Q9Y2A9 372 aa15.37■□□□□ 0.05
NUP88-207ENST00000573584 SNX5Q9Y5X3 404 aa15.37■□□□□ 0.05
NUP88-207ENST00000573584 ELOVL7A1L3X0 281 aa15.37■□□□□ 0.05
NUP88-207ENST00000573584 HS6ST1O60243 411 aa15.37■□□□□ 0.05
NUP88-207ENST00000573584 S100BP04271 92 aaPredicted RBP15.37■□□□□ 0.05
NUP88-207ENST00000573584 PRKACGP22612 351 aa15.37■□□□□ 0.05
NUP88-207ENST00000573584 MAGEA8P43361 318 aa15.37■□□□□ 0.05
NUP88-207ENST00000573584 GABARAPL2P60520 117 aa15.37■□□□□ 0.05
NUP88-207ENST00000573584 RPS24P62847 133 aaKnown RBP15.37■□□□□ 0.05
NUP88-207ENST00000573584 AQP6Q13520 282 aa15.37■□□□□ 0.05
NUP88-207ENST00000573584 DNAJC14Q6Y2X3 702 aaPredicted RBP15.37■□□□□ 0.05
NUP88-207ENST00000573584 IGFN1Q86VF2 1251 aa15.37■□□□□ 0.05
NUP88-207ENST00000573584 SEPT5Q99719 369 aaPredicted RBP15.37■□□□□ 0.05
NUP88-207ENST00000573584 ADGRE3Q9BY15 652 aa15.37■□□□□ 0.05
NUP88-207ENST00000573584 NSUN3Q9H649 340 aaKnown RBP15.37■□□□□ 0.05
NUP88-207ENST00000573584 USE1Q9NZ43 259 aa15.37■□□□□ 0.05
NUP88-207ENST00000573584 LOC100130705A0A1B0GUX0 176 aa15.37■□□□□ 0.05
NUP88-207ENST00000573584 KDELR3O43731 214 aa15.37■□□□□ 0.05
NUP88-207ENST00000573584 XYLBO75191 536 aa15.37■□□□□ 0.05
NUP88-207ENST00000573584 HTR1BP28222 390 aa15.37■□□□□ 0.05
NUP88-207ENST00000573584 DPY19L1Q2PZI1 675 aa15.37■□□□□ 0.05
NUP88-207ENST00000573584 NIPAL1Q6NVV3 410 aa15.37■□□□□ 0.05
NUP88-207ENST00000573584 SBSNQ6UWP8 590 aa15.37■□□□□ 0.05
NUP88-207ENST00000573584 ADAMTSL2Q86TH1 951 aa15.37■□□□□ 0.05
NUP88-207ENST00000573584 TMCO5AQ8N6Q1 288 aa15.37■□□□□ 0.05
NUP88-207ENST00000573584 CCDC90BQ9GZT6 254 aa15.37■□□□□ 0.05
NUP88-207ENST00000573584 TRPM7Q96QT4 1865 aa15.36■□□□□ 0.05
NUP88-207ENST00000573584 CBX4O00257 560 aa15.36■□□□□ 0.05
NUP88-207ENST00000573584 CXCR6O00574 342 aa15.36■□□□□ 0.05
NUP88-207ENST00000573584 FFAR2O15552 330 aa15.36■□□□□ 0.05
NUP88-207ENST00000573584 E2F6O75461 281 aa15.36■□□□□ 0.05
NUP88-207ENST00000573584 GUCA1CO95843 209 aa15.36■□□□□ 0.05
NUP88-207ENST00000573584 RPLP2P05387 115 aaKnown RBP15.36■□□□□ 0.05
NUP88-207ENST00000573584 HSPA7P48741 367 aa15.36■□□□□ 0.05
NUP88-207ENST00000573584 DSC1Q08554 894 aa15.36■□□□□ 0.05
NUP88-207ENST00000573584 TRAF3Q13114 568 aa15.36■□□□□ 0.05
NUP88-207ENST00000573584 LAIR2Q6ISS4 152 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms