RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 FGF5P12034 268 aa9.41□□□□□ -0.9
NPLOC4-212ENST00000573328 POLR2CP19387 275 aaPredicted RBP9.41□□□□□ -0.9
NPLOC4-212ENST00000573328 CDH3P22223 829 aa9.41□□□□□ -0.9
NPLOC4-212ENST00000573328 MSNP26038 577 aaKnown RBP9.41□□□□□ -0.9
NPLOC4-212ENST00000573328 OAS2P29728 719 aaKnown RBP9.41□□□□□ -0.9
NPLOC4-212ENST00000573328 CDKN1CP49918 316 aaPredicted RBP9.41□□□□□ -0.9
NPLOC4-212ENST00000573328 CACNG1Q06432 222 aa9.41□□□□□ -0.9
NPLOC4-212ENST00000573328 KCNAB2Q13303 367 aa9.41□□□□□ -0.9
NPLOC4-212ENST00000573328 DEFB109BQ30KR1 87 aa9.41□□□□□ -0.9
NPLOC4-212ENST00000573328 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.41□□□□□ -0.9
NPLOC4-212ENST00000573328 SYTL3Q4VX76 610 aa9.41□□□□□ -0.9
NPLOC4-212ENST00000573328 CCDC38Q502W7 563 aa9.41□□□□□ -0.9
NPLOC4-212ENST00000573328 TMTC4Q5T4D3 741 aa9.41□□□□□ -0.9
NPLOC4-212ENST00000573328 ATP1A1-AS1Q5TC04 95 aa9.41□□□□□ -0.9
NPLOC4-212ENST00000573328 KCTD11Q693B1 232 aa9.41□□□□□ -0.9
NPLOC4-212ENST00000573328 MICALCLQ6ZW33 695 aa9.41□□□□□ -0.9
NPLOC4-212ENST00000573328 RNF10Q8N5U6 811 aaKnown RBP9.41□□□□□ -0.9
NPLOC4-212ENST00000573328 OR52K1Q8NGK4 314 aa9.41□□□□□ -0.9
NPLOC4-212ENST00000573328 SLC35B2Q8TB61 432 aa9.41□□□□□ -0.9
NPLOC4-212ENST00000573328 ZFPM2Q8WW38 1151 aa9.41□□□□□ -0.9
NPLOC4-212ENST00000573328 LCN9Q8WX39 176 aa9.41□□□□□ -0.9
NPLOC4-212ENST00000573328 HES6Q96HZ4 224 aa9.41□□□□□ -0.9
NPLOC4-212ENST00000573328 LINC00615Q96LM1 132 aaPredicted RBP9.41□□□□□ -0.9
NPLOC4-212ENST00000573328 FERD3LQ96RJ6 166 aa9.41□□□□□ -0.9
NPLOC4-212ENST00000573328 CD180Q99467 661 aa9.41□□□□□ -0.9
NPLOC4-212ENST00000573328 C19orf43Q9BQ61 176 aa9.41□□□□□ -0.9
NPLOC4-212ENST00000573328 SPRY4Q9C004 299 aa9.41□□□□□ -0.9
NPLOC4-212ENST00000573328 TRIM4Q9C037 500 aa9.41□□□□□ -0.9
NPLOC4-212ENST00000573328 ADNPQ9H2P0 1102 aa9.41□□□□□ -0.9
NPLOC4-212ENST00000573328 SRMSQ9H3Y6 488 aa9.41□□□□□ -0.9
NPLOC4-212ENST00000573328 FANCEQ9HB96 536 aa9.41□□□□□ -0.9
NPLOC4-212ENST00000573328 STARD5Q9NSY2 213 aa9.41□□□□□ -0.9
NPLOC4-212ENST00000573328 GEMIN8Q9NWZ8 242 aaKnown RBP9.41□□□□□ -0.9
NPLOC4-212ENST00000573328 SMARCAL1Q9NZC9 954 aa9.41□□□□□ -0.9
NPLOC4-212ENST00000573328 ZNF148Q9UQR1 794 aa9.41□□□□□ -0.9
NPLOC4-212ENST00000573328 SPTA1P02549 2419 aa9.41□□□□□ -0.9
NPLOC4-212ENST00000573328 TNRC6AQ8NDV7 1962 aaKnown RBP9.41□□□□□ -0.9
NPLOC4-212ENST00000573328 CCDC88CQ9P219 2028 aa9.4□□□□□ -0.9
NPLOC4-212ENST00000573328 C17orf113A0A1B0GUU1 675 aa9.4□□□□□ -0.9
NPLOC4-212ENST00000573328 OR51F1A6NGY5 319 aa9.4□□□□□ -0.9
NPLOC4-212ENST00000573328 H7C0S8 307 aa9.4□□□□□ -0.9
NPLOC4-212ENST00000573328 SGTAO43765 313 aa9.4□□□□□ -0.9
NPLOC4-212ENST00000573328 ZBTB11O95625 1053 aaPredicted RBP9.4□□□□□ -0.9
NPLOC4-212ENST00000573328 FOLR1P15328 257 aa9.4□□□□□ -0.9
NPLOC4-212ENST00000573328 FDFT1P37268 417 aa9.4□□□□□ -0.9
NPLOC4-212ENST00000573328 PREPP48147 710 aa9.4□□□□□ -0.9
NPLOC4-212ENST00000573328 GSDMDP57764 484 aa9.4□□□□□ -0.9
NPLOC4-212ENST00000573328 HSD11B2P80365 405 aa9.4□□□□□ -0.9
NPLOC4-212ENST00000573328 CDH17Q12864 832 aa9.4□□□□□ -0.9
NPLOC4-212ENST00000573328 MSLNQ13421 630 aaPredicted RBP9.4□□□□□ -0.9
NPLOC4-212ENST00000573328 SNX1Q13596 522 aa9.4□□□□□ -0.9
NPLOC4-212ENST00000573328 ERV3-1Q14264 604 aa9.4□□□□□ -0.9
NPLOC4-212ENST00000573328 BRD3Q15059 726 aa9.4□□□□□ -0.9
NPLOC4-212ENST00000573328 GPR19Q15760 415 aa9.4□□□□□ -0.9
NPLOC4-212ENST00000573328 DBN1Q16643 649 aa9.4□□□□□ -0.9
NPLOC4-212ENST00000573328 SKIDA1Q1XH10 827 aa9.4□□□□□ -0.9
NPLOC4-212ENST00000573328 CERS6Q6ZMG9 384 aa9.4□□□□□ -0.9
NPLOC4-212ENST00000573328 ATG14Q6ZNE5 492 aa9.4□□□□□ -0.9
NPLOC4-212ENST00000573328 HOOK3Q86VS8 718 aa9.4□□□□□ -0.9
NPLOC4-212ENST00000573328 PTRH1Q86Y79 214 aaKnown RBP9.4□□□□□ -0.9
NPLOC4-212ENST00000573328 KMT5CQ86Y97 462 aa9.4□□□□□ -0.9
NPLOC4-212ENST00000573328 TMEM126BQ8IUX1 230 aa9.4□□□□□ -0.9
NPLOC4-212ENST00000573328 KLHDC8BQ8IXV7 354 aa9.4□□□□□ -0.9
NPLOC4-212ENST00000573328 CLDN19Q8N6F1 224 aa9.4□□□□□ -0.9
NPLOC4-212ENST00000573328 CCDC89Q8N998 374 aa9.4□□□□□ -0.9
NPLOC4-212ENST00000573328 ACVR1CQ8NER5 493 aa9.4□□□□□ -0.9
NPLOC4-212ENST00000573328 OR4E2Q8NGC2 313 aa9.4□□□□□ -0.9
NPLOC4-212ENST00000573328 C1orf54Q8WWF1 131 aa9.4□□□□□ -0.9
NPLOC4-212ENST00000573328 CDKN2AIPNLQ96HQ2 116 aa9.4□□□□□ -0.9
NPLOC4-212ENST00000573328 SLC41A2Q96JW4 573 aa9.4□□□□□ -0.9
NPLOC4-212ENST00000573328 HGH1Q9BTY7 390 aa9.4□□□□□ -0.9
NPLOC4-212ENST00000573328 FGF21Q9NSA1 209 aa9.4□□□□□ -0.9
NPLOC4-212ENST00000573328 KCND3Q9UK17 655 aa9.4□□□□□ -0.9
NPLOC4-212ENST00000573328 PADI1Q9ULC6 663 aa9.4□□□□□ -0.9
NPLOC4-212ENST00000573328 BSNQ9UPA5 3926 aa9.39□□□□□ -0.91
NPLOC4-212ENST00000573328 IGLV3-16A0A075B6K0 115 aa9.39□□□□□ -0.91
NPLOC4-212ENST00000573328 TRBV5-4A0A0C4DH59 114 aa9.39□□□□□ -0.91
NPLOC4-212ENST00000573328 HEATR9A2RTY3 570 aa9.39□□□□□ -0.91
NPLOC4-212ENST00000573328 CDC14CA4D256 554 aa9.39□□□□□ -0.91
NPLOC4-212ENST00000573328 ERI2A8K979 691 aaKnown RBP9.39□□□□□ -0.91
NPLOC4-212ENST00000573328 MATN2O00339 956 aa9.39□□□□□ -0.91
NPLOC4-212ENST00000573328 QSOX1O00391 747 aa9.39□□□□□ -0.91
NPLOC4-212ENST00000573328 MAP3K7O43318 606 aa9.39□□□□□ -0.91
NPLOC4-212ENST00000573328 LIASO43766 372 aa9.39□□□□□ -0.91
NPLOC4-212ENST00000573328 CPNE3O75131 537 aaKnown RBP9.39□□□□□ -0.91
NPLOC4-212ENST00000573328 SCRG1O75711 98 aa9.39□□□□□ -0.91
NPLOC4-212ENST00000573328 AP2A2O94973 939 aa9.39□□□□□ -0.91
NPLOC4-212ENST00000573328 TIAF1O95411 115 aa9.39□□□□□ -0.91
NPLOC4-212ENST00000573328 FTH1P02794 183 aa9.39□□□□□ -0.91
NPLOC4-212ENST00000573328 NTRK1P04629 796 aa9.39□□□□□ -0.91
NPLOC4-212ENST00000573328 ITGB6P18564 788 aa9.39□□□□□ -0.91
NPLOC4-212ENST00000573328 F8A1P23610 371 aa9.39□□□□□ -0.91
NPLOC4-212ENST00000573328 STIP1P31948 543 aaKnown RBP9.39□□□□□ -0.91
NPLOC4-212ENST00000573328 NSG1P42857 185 aa9.39□□□□□ -0.91
NPLOC4-212ENST00000573328 KPNA2P52292 529 aaKnown RBP9.39□□□□□ -0.91
NPLOC4-212ENST00000573328 TUBB4BP68371 445 aa9.39□□□□□ -0.91
NPLOC4-212ENST00000573328 PRKG2Q13237 762 aa9.39□□□□□ -0.91
NPLOC4-212ENST00000573328 DNASE1L3Q13609 305 aa9.39□□□□□ -0.91
NPLOC4-212ENST00000573328 LAMB3Q13751 1172 aa9.39□□□□□ -0.91
NPLOC4-212ENST00000573328 TUBB2AQ13885 445 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms