RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 EOGTQ5NDL2 527 aa5.48□□□□□ -1.53
SF3B3-214ENST00000572365 ATF7IP2Q5U623 682 aa5.48□□□□□ -1.53
SF3B3-214ENST00000572365 LIPMQ5VYY2 423 aa5.48□□□□□ -1.53
SF3B3-214ENST00000572365 ARMCX5Q6P1M9 558 aa5.48□□□□□ -1.53
SF3B3-214ENST00000572365 ALKAL1Q6UXT8 129 aa5.48□□□□□ -1.53
SF3B3-214ENST00000572365 SLC36A4Q6YBV0 504 aa5.48□□□□□ -1.53
SF3B3-214ENST00000572365 ZNF771Q7L3S4 317 aaPredicted RBP5.48□□□□□ -1.53
SF3B3-214ENST00000572365 MAATS1Q7Z4T9 603 aa5.48□□□□□ -1.53
SF3B3-214ENST00000572365 ITIH5Q86UX2 942 aa5.48□□□□□ -1.53
SF3B3-214ENST00000572365 MON1AQ86VX9 555 aa5.48□□□□□ -1.53
SF3B3-214ENST00000572365 TMPRSS12Q86WS5 348 aa5.48□□□□□ -1.53
SF3B3-214ENST00000572365 ZBTB8OSQ8IWT0 167 aa5.48□□□□□ -1.53
SF3B3-214ENST00000572365 C4orf19Q8IY42 314 aa5.48□□□□□ -1.53
SF3B3-214ENST00000572365 OR10T2Q8NGX3 314 aa5.48□□□□□ -1.53
SF3B3-214ENST00000572365 ATP2A3Q93084 1043 aa5.48□□□□□ -1.53
SF3B3-214ENST00000572365 SARAFQ96BY9 339 aa5.48□□□□□ -1.53
SF3B3-214ENST00000572365 P2RY11Q96G91 374 aa5.48□□□□□ -1.53
SF3B3-214ENST00000572365 PI4K2AQ9BTU6 479 aa5.48□□□□□ -1.53
SF3B3-214ENST00000572365 DUSP26Q9BV47 211 aa5.48□□□□□ -1.53
SF3B3-214ENST00000572365 AGXT2Q9BYV1 514 aa5.48□□□□□ -1.53
SF3B3-214ENST00000572365 CLPBQ9H078 707 aa5.48□□□□□ -1.53
SF3B3-214ENST00000572365 GLT8D2Q9H1C3 349 aa5.48□□□□□ -1.53
SF3B3-214ENST00000572365 ZHX3Q9H4I2 956 aa5.48□□□□□ -1.53
SF3B3-214ENST00000572365 SYNPO2LQ9H987 977 aa5.48□□□□□ -1.53
SF3B3-214ENST00000572365 PRMT7Q9NVM4 692 aaPredicted RBP5.48□□□□□ -1.53
SF3B3-214ENST00000572365 ASNSD1Q9NWL6 643 aa5.48□□□□□ -1.53
SF3B3-214ENST00000572365 HS3ST3A1Q9Y663 406 aa5.48□□□□□ -1.53
SF3B3-214ENST00000572365 SVILO95425 2214 aa5.48□□□□□ -1.53
SF3B3-214ENST00000572365 ADGRG4Q8IZF6 3080 aa5.47□□□□□ -1.53
SF3B3-214ENST00000572365 PRRC2CQ9Y520 2896 aaKnown RBP5.47□□□□□ -1.53
SF3B3-214ENST00000572365 MED13LQ71F56 2210 aa5.47□□□□□ -1.53
SF3B3-214ENST00000572365 A0A1W2PQF6 199 aa5.47□□□□□ -1.53
SF3B3-214ENST00000572365 POC1B-GALNT4F8VUJ3 575 aa5.47□□□□□ -1.53
SF3B3-214ENST00000572365 HIP1O00291 1037 aa5.47□□□□□ -1.53
SF3B3-214ENST00000572365 BCAT2O15382 392 aaPredicted RBP5.47□□□□□ -1.53
SF3B3-214ENST00000572365 GCATO75600 419 aa5.47□□□□□ -1.53
SF3B3-214ENST00000572365 OAZ2O95190 189 aa5.47□□□□□ -1.53
SF3B3-214ENST00000572365 RFPL3SP0C7P2 107 aa5.47□□□□□ -1.53
SF3B3-214ENST00000572365 PRPH2P23942 346 aa5.47□□□□□ -1.53
SF3B3-214ENST00000572365 CHMLP26374 656 aa5.47□□□□□ -1.53
SF3B3-214ENST00000572365 GNA11P29992 359 aa5.47□□□□□ -1.53
SF3B3-214ENST00000572365 ACTN2P35609 894 aa5.47□□□□□ -1.53
SF3B3-214ENST00000572365 GEMIN4P57678 1058 aaKnown RBP5.47□□□□□ -1.53
SF3B3-214ENST00000572365 TMPRSS3P57727 454 aa5.47□□□□□ -1.53
SF3B3-214ENST00000572365 TBL3Q12788 808 aaKnown RBP5.47□□□□□ -1.53
SF3B3-214ENST00000572365 PPP2R5CQ13362 524 aa5.47□□□□□ -1.53
SF3B3-214ENST00000572365 VEPH1Q14D04 833 aa5.47□□□□□ -1.53
SF3B3-214ENST00000572365 GLE1Q53GS7 698 aaKnown RBP5.47□□□□□ -1.53
SF3B3-214ENST00000572365 SPDYCQ5MJ68 293 aa5.47□□□□□ -1.53
SF3B3-214ENST00000572365 ZNF362Q5T0B9 420 aaPredicted RBP5.47□□□□□ -1.53
SF3B3-214ENST00000572365 NAA35Q5VZE5 725 aa5.47□□□□□ -1.53
SF3B3-214ENST00000572365 CAVIN1Q6NZI2 390 aaKnown RBP5.47□□□□□ -1.53
SF3B3-214ENST00000572365 RHBDF2Q6PJF5 856 aa5.47□□□□□ -1.53
SF3B3-214ENST00000572365 DBX2Q6ZNG2 339 aa5.47□□□□□ -1.53
SF3B3-214ENST00000572365 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.47□□□□□ -1.53
SF3B3-214ENST00000572365 MRGPRGQ86SM5 289 aa5.47□□□□□ -1.53
SF3B3-214ENST00000572365 SRRM1Q8IYB3 904 aaKnown RBP5.47□□□□□ -1.53
SF3B3-214ENST00000572365 GALNT4Q8N4A0 578 aa5.47□□□□□ -1.53
SF3B3-214ENST00000572365 EID2Q8N6I1 236 aa5.47□□□□□ -1.53
SF3B3-214ENST00000572365 ST8SIA4Q92187 359 aa5.47□□□□□ -1.53
SF3B3-214ENST00000572365 MRPS31Q92665 395 aaKnown RBP5.47□□□□□ -1.53
SF3B3-214ENST00000572365 EXOC4Q96A65 974 aa5.47□□□□□ -1.53
SF3B3-214ENST00000572365 CNDP2Q96KP4 475 aaKnown RBP5.47□□□□□ -1.53
SF3B3-214ENST00000572365 CCDC43Q96MW1 224 aaKnown RBP5.47□□□□□ -1.53
SF3B3-214ENST00000572365 GPR78Q96P69 363 aa5.47□□□□□ -1.53
SF3B3-214ENST00000572365 TCHPQ9BT92 498 aa5.47□□□□□ -1.53
SF3B3-214ENST00000572365 GATA5Q9BWX5 397 aaPredicted RBP5.47□□□□□ -1.53
SF3B3-214ENST00000572365 TRIM9Q9C026 710 aa5.47□□□□□ -1.53
SF3B3-214ENST00000572365 FAM124BQ9H5Z6 455 aaPredicted RBP5.47□□□□□ -1.53
SF3B3-214ENST00000572365 STN1Q9H668 368 aaKnown RBP5.47□□□□□ -1.53
SF3B3-214ENST00000572365 SERGEFQ9UGK8 458 aa5.47□□□□□ -1.53
SF3B3-214ENST00000572365 TLK1Q9UKI8 766 aa5.47□□□□□ -1.53
SF3B3-214ENST00000572365 HSF4Q9ULV5 492 aa5.47□□□□□ -1.53
SF3B3-214ENST00000572365 ASB3Q9Y575 518 aa5.47□□□□□ -1.53
SF3B3-214ENST00000572365 RP1P56715 2156 aa5.47□□□□□ -1.53
SF3B3-214ENST00000572365 NPIPB13A6NJU9 1138 aa5.46□□□□□ -1.54
SF3B3-214ENST00000572365 NPIPB5A8MRT5 1133 aa5.46□□□□□ -1.54
SF3B3-214ENST00000572365 B4E171 279 aa5.46□□□□□ -1.54
SF3B3-214ENST00000572365 NPIPB4C9JG80 1138 aa5.46□□□□□ -1.54
SF3B3-214ENST00000572365 PEX12O00623 359 aa5.46□□□□□ -1.54
SF3B3-214ENST00000572365 FLRT2O43155 660 aa5.46□□□□□ -1.54
SF3B3-214ENST00000572365 HCRTO43612 131 aa5.46□□□□□ -1.54
SF3B3-214ENST00000572365 KIF1CO43896 1103 aaKnown RBP5.46□□□□□ -1.54
SF3B3-214ENST00000572365 CCNT1O60563 726 aaKnown RBP5.46□□□□□ -1.54
SF3B3-214ENST00000572365 RAMP2O60895 175 aa5.46□□□□□ -1.54
SF3B3-214ENST00000572365 CNTN5O94779 1100 aa5.46□□□□□ -1.54
SF3B3-214ENST00000572365 METTL18O95568 372 aa5.46□□□□□ -1.54
SF3B3-214ENST00000572365 FGF19O95750 216 aa5.46□□□□□ -1.54
SF3B3-214ENST00000572365 LDOC1O95751 146 aaPredicted RBP5.46□□□□□ -1.54
SF3B3-214ENST00000572365 IGHDP01880 384 aa5.46□□□□□ -1.54
SF3B3-214ENST00000572365 CHRM5P08912 532 aaPredicted RBP5.46□□□□□ -1.54
SF3B3-214ENST00000572365 ATP1A3P13637 1013 aa5.46□□□□□ -1.54
SF3B3-214ENST00000572365 GPD1P21695 349 aa5.46□□□□□ -1.54
SF3B3-214ENST00000572365 CYP2F1P24903 491 aa5.46□□□□□ -1.54
SF3B3-214ENST00000572365 RPL9P32969 192 aaKnown RBP5.46□□□□□ -1.54
SF3B3-214ENST00000572365 KRT9P35527 623 aa5.46□□□□□ -1.54
SF3B3-214ENST00000572365 HNF1BP35680 557 aa5.46□□□□□ -1.54
SF3B3-214ENST00000572365 TSPAN7P41732 249 aa5.46□□□□□ -1.54
SF3B3-214ENST00000572365 DPP6P42658 865 aa5.46□□□□□ -1.54
SF3B3-214ENST00000572365 VPS41P49754 854 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms