RNA–Protein interactions for RNA: ENST00000567271.1

NME3-210, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-210ENST00000567271 IGDCC3Q8IVU1 814 aa21.12■□□□□ 0.97
NME3-210ENST00000567271 FBXO39Q8N4B4 442 aa21.12■□□□□ 0.97
NME3-210ENST00000567271 LKAAEAR1Q8TD35 194 aa21.12■□□□□ 0.97
NME3-210ENST00000567271 LPGAT1Q92604 370 aa21.12■□□□□ 0.97
NME3-210ENST00000567271 ZNF592Q92610 1267 aa21.12■□□□□ 0.97
NME3-210ENST00000567271 NAT9Q9BTE0 207 aa21.12■□□□□ 0.97
NME3-210ENST00000567271 ZMYND15Q9H091 742 aa21.12■□□□□ 0.97
NME3-210ENST00000567271 C20orf96Q9NUD7 363 aaPredicted RBP21.12■□□□□ 0.97
NME3-210ENST00000567271 GNPTGQ9UJJ9 305 aa21.12■□□□□ 0.97
NME3-210ENST00000567271 NDC80O14777 642 aa21.11■□□□□ 0.97
NME3-210ENST00000567271 PLD2O14939 933 aa21.11■□□□□ 0.97
NME3-210ENST00000567271 HGSO14964 777 aaPredicted RBP21.11■□□□□ 0.97
NME3-210ENST00000567271 AMD1P17707 334 aa21.11■□□□□ 0.97
NME3-210ENST00000567271 NDUFS1P28331 727 aa21.11■□□□□ 0.97
NME3-210ENST00000567271 PLOD1Q02809 727 aaPredicted RBP21.11■□□□□ 0.97
NME3-210ENST00000567271 BOP1Q14137 746 aaKnown RBP21.11■□□□□ 0.97
NME3-210ENST00000567271 C16orf72Q14CZ0 275 aa21.11■□□□□ 0.97
NME3-210ENST00000567271 BRD3Q15059 726 aa21.11■□□□□ 0.97
NME3-210ENST00000567271 ST3GAL2Q16842 350 aa21.11■□□□□ 0.97
NME3-210ENST00000567271 SYTL3Q4VX76 610 aa21.11■□□□□ 0.97
NME3-210ENST00000567271 PTRHD1Q6GMV3 140 aaKnown RBP21.11■□□□□ 0.97
NME3-210ENST00000567271 FOXR1Q6PIV2 292 aa21.11■□□□□ 0.97
NME3-210ENST00000567271 PDZD3Q86UT5 571 aa21.11■□□□□ 0.97
NME3-210ENST00000567271 LMNTD2Q8IXW0 634 aa21.11■□□□□ 0.97
NME3-210ENST00000567271 KRT222Q8N1A0 295 aa21.11■□□□□ 0.97
NME3-210ENST00000567271 SERBP1Q8NC51 408 aaKnown RBP eCLIP21.11■□□□□ 0.97
NME3-210ENST00000567271 BBOF1Q8ND07 529 aa21.11■□□□□ 0.97
NME3-210ENST00000567271 RCBTB1Q8NDN9 531 aa21.11■□□□□ 0.97
NME3-210ENST00000567271 RSC1A1Q92681 617 aa21.11■□□□□ 0.97
NME3-210ENST00000567271 SLC46A1Q96NT5 459 aa21.11■□□□□ 0.97
NME3-210ENST00000567271 BIRC8Q96P09 236 aa21.11■□□□□ 0.97
NME3-210ENST00000567271 CMKLR1Q99788 373 aa21.11■□□□□ 0.97
NME3-210ENST00000567271 KIR3DX1Q9H7L2 352 aa21.11■□□□□ 0.97
NME3-210ENST00000567271 SLC24A2Q9UI40 661 aa21.11■□□□□ 0.97
NME3-210ENST00000567271 ZMIZ1Q9ULJ6 1067 aa21.11■□□□□ 0.97
NME3-210ENST00000567271 LOXL2Q9Y4K0 774 aa21.11■□□□□ 0.97
NME3-210ENST00000567271 DMXL2Q8TDJ6 3036 aa21.1■□□□□ 0.97
NME3-210ENST00000567271 EPG5Q9HCE0 2579 aa21.1■□□□□ 0.97
NME3-210ENST00000567271 APC2O95996 2303 aa21.1■□□□□ 0.97
NME3-210ENST00000567271 UBA6A0AVT1 1052 aaPredicted RBP21.1■□□□□ 0.97
NME3-210ENST00000567271 BHMG1C9JSJ3 638 aaPredicted RBP21.1■□□□□ 0.97
NME3-210ENST00000567271 KIF2AO00139 706 aaPredicted RBP21.1■□□□□ 0.97
NME3-210ENST00000567271 TTC4O95801 387 aa21.1■□□□□ 0.97
NME3-210ENST00000567271 S1PR4O95977 384 aa21.1■□□□□ 0.97
NME3-210ENST00000567271 HGFP14210 728 aa21.1■□□□□ 0.97
NME3-210ENST00000567271 AOAHP28039 575 aa21.1■□□□□ 0.97
NME3-210ENST00000567271 FMO4P31512 558 aa21.1■□□□□ 0.97
NME3-210ENST00000567271 ADARP55265 1226 aaKnown RBP21.1■□□□□ 0.97
NME3-210ENST00000567271 EIF3BP55884 814 aaKnown RBP21.1■□□□□ 0.97
NME3-210ENST00000567271 ARL4CP56559 192 aa21.1■□□□□ 0.97
NME3-210ENST00000567271 KRT33BQ14525 404 aa21.1■□□□□ 0.97
NME3-210ENST00000567271 CRYMQ14894 314 aa21.1■□□□□ 0.97
NME3-210ENST00000567271 HIF1AQ16665 826 aa21.1■□□□□ 0.97
NME3-210ENST00000567271 WHAMMP3Q1A5X7 153 aa21.1■□□□□ 0.97
NME3-210ENST00000567271 TBC1D25Q3MII6 688 aa21.1■□□□□ 0.97
NME3-210ENST00000567271 CTSL3PQ5NE16 218 aa21.1■□□□□ 0.97
NME3-210ENST00000567271 DUPD1Q68J44 220 aa21.1■□□□□ 0.97
NME3-210ENST00000567271 ZNF470Q6ECI4 717 aa21.1■□□□□ 0.97
NME3-210ENST00000567271 PLXDC1Q8IUK5 500 aa21.1■□□□□ 0.97
NME3-210ENST00000567271 JPH3Q8WXH2 748 aaPredicted RBP21.1■□□□□ 0.97
NME3-210ENST00000567271 TFGQ92734 400 aaPredicted RBP21.1■□□□□ 0.97
NME3-210ENST00000567271 PANX3Q96QZ0 392 aa21.1■□□□□ 0.97
NME3-210ENST00000567271 FERD3LQ96RJ6 166 aa21.1■□□□□ 0.97
NME3-210ENST00000567271 ASCL3Q9NQ33 180 aa21.1■□□□□ 0.97
NME3-210ENST00000567271 INTS10Q9NVR2 710 aaKnown RBP21.1■□□□□ 0.97
NME3-210ENST00000567271 WHRNQ9P202 907 aa21.1■□□□□ 0.97
NME3-210ENST00000567271 VPS9D1Q9Y2B5 631 aa21.1■□□□□ 0.97
NME3-210ENST00000567271 MN1Q10571 1320 aaPredicted RBP21.09■□□□□ 0.97
NME3-210ENST00000567271 AGRPO00253 132 aa21.09■□□□□ 0.97
NME3-210ENST00000567271 GPC4O75487 556 aa21.09■□□□□ 0.97
NME3-210ENST00000567271 C9P02748 559 aa21.09■□□□□ 0.97
NME3-210ENST00000567271 ACADLP28330 430 aa21.09■□□□□ 0.97
NME3-210ENST00000567271 RBMS1P29558 406 aaKnown RBP21.09■□□□□ 0.97
NME3-210ENST00000567271 ELK3P41970 407 aa21.09■□□□□ 0.97
NME3-210ENST00000567271 MLLT3P42568 568 aaPredicted RBP21.09■□□□□ 0.97
NME3-210ENST00000567271 CAPZBP47756 277 aa21.09■□□□□ 0.97
NME3-210ENST00000567271 PLCL1Q15111 1095 aa21.09■□□□□ 0.97
NME3-210ENST00000567271 ZNF789Q5FWF6 425 aa21.09■□□□□ 0.97
NME3-210ENST00000567271 SPANXN3Q5MJ09 141 aa21.09■□□□□ 0.97
NME3-210ENST00000567271 ARHGAP22Q7Z5H3 698 aa21.09■□□□□ 0.97
NME3-210ENST00000567271 DENND6AQ8IWF6 608 aa21.09■□□□□ 0.97
NME3-210ENST00000567271 UNC5BQ8IZJ1 945 aa21.09■□□□□ 0.97
NME3-210ENST00000567271 PHC3Q8NDX5 983 aa21.09■□□□□ 0.97
NME3-210ENST00000567271 CALML6Q8TD86 181 aa21.09■□□□□ 0.97
NME3-210ENST00000567271 ASZ1Q8WWH4 475 aa21.09■□□□□ 0.97
NME3-210ENST00000567271 LRRC39Q96DD0 335 aa21.09■□□□□ 0.97
NME3-210ENST00000567271 ZNF578Q96N58 590 aaPredicted RBP21.09■□□□□ 0.97
NME3-210ENST00000567271 WDR83Q9BRX9 315 aaKnown RBP21.09■□□□□ 0.97
NME3-210ENST00000567271 RAB33BQ9H082 229 aa21.09■□□□□ 0.97
NME3-210ENST00000567271 DPH5Q9H2P9 285 aa21.09■□□□□ 0.97
NME3-210ENST00000567271 MVB12BQ9H7P6 319 aa21.09■□□□□ 0.97
NME3-210ENST00000567271 PLAC1Q9HBJ0 212 aa21.09■□□□□ 0.97
NME3-210ENST00000567271 AKAP7Q9P0M2 348 aaPredicted RBP21.09■□□□□ 0.97
NME3-210ENST00000567271 CDYLQ9Y232 598 aa21.09■□□□□ 0.97
NME3-210ENST00000567271 CRYL1Q9Y2S2 319 aa21.09■□□□□ 0.97
NME3-210ENST00000567271 TEX264Q9Y6I9 313 aa21.09■□□□□ 0.97
NME3-210ENST00000567271 A8MU76 341 aa21.08■□□□□ 0.97
NME3-210ENST00000567271 H3BMM5 538 aa21.08■□□□□ 0.97
NME3-210ENST00000567271 CAPN5O15484 640 aaPredicted RBP21.08■□□□□ 0.97
NME3-210ENST00000567271 TNFSF15O95150 251 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms