RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 C17orf113A0A1B0GUU1 675 aa17.84■□□□□ 0.45
USB1-213ENST00000566292 MIF4GDA9UHW6 222 aaKnown RBP17.84■□□□□ 0.45
USB1-213ENST00000566292 CFAP99D6REC4 459 aa17.84■□□□□ 0.45
USB1-213ENST00000566292 KATNA1O75449 491 aa17.84■□□□□ 0.45
USB1-213ENST00000566292 CCNYL3P0C7X3 344 aa17.84■□□□□ 0.45
USB1-213ENST00000566292 ACRV1P26436 265 aa17.84■□□□□ 0.45
USB1-213ENST00000566292 HSD11B2P80365 405 aa17.84■□□□□ 0.45
USB1-213ENST00000566292 DNASE1L3Q13609 305 aa17.84■□□□□ 0.45
USB1-213ENST00000566292 ERV3-1Q14264 604 aa17.84■□□□□ 0.45
USB1-213ENST00000566292 GSE1Q14687 1217 aa17.84■□□□□ 0.45
USB1-213ENST00000566292 GPR33Q49SQ1 333 aa17.84■□□□□ 0.45
USB1-213ENST00000566292 ZRANB3Q5FWF4 1079 aa17.84■□□□□ 0.45
USB1-213ENST00000566292 SERPINA9Q86WD7 417 aa17.84■□□□□ 0.45
USB1-213ENST00000566292 SYCE1Q8N0S2 351 aa17.84■□□□□ 0.45
USB1-213ENST00000566292 C9orf43Q8TAL5 461 aaPredicted RBP17.84■□□□□ 0.45
USB1-213ENST00000566292 CT55Q8WUE5 264 aa17.84■□□□□ 0.45
USB1-213ENST00000566292 ABHD17AQ96GS6 310 aa17.84■□□□□ 0.45
USB1-213ENST00000566292 FCRL4Q96PJ5 515 aa17.84■□□□□ 0.45
USB1-213ENST00000566292 CCM2Q9BSQ5 444 aa17.84■□□□□ 0.45
USB1-213ENST00000566292 TMEM121Q9BTD3 319 aa17.84■□□□□ 0.45
USB1-213ENST00000566292 OR52A5Q9H2C5 316 aa17.84■□□□□ 0.45
USB1-213ENST00000566292 LRRC40Q9H9A6 602 aa17.84■□□□□ 0.45
USB1-213ENST00000566292 COG4Q9H9E3 785 aa17.84■□□□□ 0.45
USB1-213ENST00000566292 ZNF71Q9NQZ8 489 aaPredicted RBP17.84■□□□□ 0.45
USB1-213ENST00000566292 PIH1D1Q9NWS0 290 aaKnown RBP17.84■□□□□ 0.45
USB1-213ENST00000566292 PADI1Q9ULC6 663 aa17.84■□□□□ 0.45
USB1-213ENST00000566292 PCDHB3Q9Y5E6 796 aa17.84■□□□□ 0.45
USB1-213ENST00000566292 PCDHGA6Q9Y5G7 932 aa17.84■□□□□ 0.45
USB1-213ENST00000566292 KCNMB2Q9Y691 235 aa17.84■□□□□ 0.45
USB1-213ENST00000566292 COLEC10Q9Y6Z7 277 aa17.84■□□□□ 0.45
USB1-213ENST00000566292 ZBTB11O95625 1053 aaPredicted RBP17.83■□□□□ 0.44
USB1-213ENST00000566292 MT-ND3P03897 115 aa17.83■□□□□ 0.44
USB1-213ENST00000566292 NTRK1P04629 796 aa17.83■□□□□ 0.44
USB1-213ENST00000566292 PTMAP06454 111 aaKnown RBP17.83■□□□□ 0.44
USB1-213ENST00000566292 POLR2CP19387 275 aaPredicted RBP17.83■□□□□ 0.44
USB1-213ENST00000566292 NDUFS1P28331 727 aa17.83■□□□□ 0.44
USB1-213ENST00000566292 ARL4DP49703 201 aa17.83■□□□□ 0.44
USB1-213ENST00000566292 KIF5AQ12840 1032 aa17.83■□□□□ 0.44
USB1-213ENST00000566292 POU6F1Q14863 301 aa17.83■□□□□ 0.44
USB1-213ENST00000566292 SKIDA1Q1XH10 827 aa17.83■□□□□ 0.44
USB1-213ENST00000566292 ARMC6Q6NXE6 501 aa17.83■□□□□ 0.44
USB1-213ENST00000566292 TMEM135Q86UB9 458 aa17.83■□□□□ 0.44
USB1-213ENST00000566292 PIANPQ8IYJ0 282 aa17.83■□□□□ 0.44
USB1-213ENST00000566292 TAB3Q8N5C8 712 aaPredicted RBP17.83■□□□□ 0.44
USB1-213ENST00000566292 OR4E2Q8NGC2 313 aa17.83■□□□□ 0.44
USB1-213ENST00000566292 LRRC45Q96CN5 670 aa17.83■□□□□ 0.44
USB1-213ENST00000566292 CDKN2AIPNLQ96HQ2 116 aa17.83■□□□□ 0.44
USB1-213ENST00000566292 HES6Q96HZ4 224 aa17.83■□□□□ 0.44
USB1-213ENST00000566292 RUFY1Q96T51 708 aa17.83■□□□□ 0.44
USB1-213ENST00000566292 NRTNQ99748 197 aa17.83■□□□□ 0.44
USB1-213ENST00000566292 KCND3Q9UK17 655 aa17.83■□□□□ 0.44
USB1-213ENST00000566292 HEBP2Q9Y5Z4 205 aa17.83■□□□□ 0.44
USB1-213ENST00000566292 CAPN6Q9Y6Q1 641 aa17.83■□□□□ 0.44
USB1-213ENST00000566292 AP2A1O95782 977 aa17.82■□□□□ 0.44
USB1-213ENST00000566292 PDHA2P29803 388 aa17.82■□□□□ 0.44
USB1-213ENST00000566292 TUBB4BP68371 445 aa17.82■□□□□ 0.44
USB1-213ENST00000566292 TLE1Q04724 770 aa17.82■□□□□ 0.44
USB1-213ENST00000566292 TUBB2AQ13885 445 aa17.82■□□□□ 0.44
USB1-213ENST00000566292 SEPT6Q14141 434 aa17.82■□□□□ 0.44
USB1-213ENST00000566292 KRT33BQ14525 404 aa17.82■□□□□ 0.44
USB1-213ENST00000566292 GPR19Q15760 415 aa17.82■□□□□ 0.44
USB1-213ENST00000566292 P3H1Q32P28 736 aa17.82■□□□□ 0.44
USB1-213ENST00000566292 FAM199XQ6PEV8 388 aaPredicted RBP17.82■□□□□ 0.44
USB1-213ENST00000566292 TAS2R42Q7RTR8 314 aa17.82■□□□□ 0.44
USB1-213ENST00000566292 BPHLQ86WA6 291 aaPredicted RBP17.82■□□□□ 0.44
USB1-213ENST00000566292 CARFQ8N187 725 aa17.82■□□□□ 0.44
USB1-213ENST00000566292 CLDN19Q8N6F1 224 aa17.82■□□□□ 0.44
USB1-213ENST00000566292 ACVR1CQ8NER5 493 aa17.82■□□□□ 0.44
USB1-213ENST00000566292 STYXQ8WUJ0 223 aa17.82■□□□□ 0.44
USB1-213ENST00000566292 ZNF501Q96CX3 271 aaPredicted RBP17.82■□□□□ 0.44
USB1-213ENST00000566292 FERD3LQ96RJ6 166 aa17.82■□□□□ 0.44
USB1-213ENST00000566292 TUBB2BQ9BVA1 445 aa17.82■□□□□ 0.44
USB1-213ENST00000566292 POMT2Q9UKY4 750 aa17.82■□□□□ 0.44
USB1-213ENST00000566292 POLHQ9Y253 713 aa17.82■□□□□ 0.44
USB1-213ENST00000566292 BTRCQ9Y297 605 aa17.82■□□□□ 0.44
USB1-213ENST00000566292 FLNCQ14315 2725 aa17.81■□□□□ 0.44
USB1-213ENST00000566292 CDC14CA4D256 554 aa17.81■□□□□ 0.44
USB1-213ENST00000566292 C21orf140B9A014 251 aa17.81■□□□□ 0.44
USB1-213ENST00000566292 CREG1O75629 220 aa17.81■□□□□ 0.44
USB1-213ENST00000566292 PSMA3P25788 255 aa17.81■□□□□ 0.44
USB1-213ENST00000566292 CACNG1Q06432 222 aa17.81■□□□□ 0.44
USB1-213ENST00000566292 DBN1Q16643 649 aa17.81■□□□□ 0.44
USB1-213ENST00000566292 PHC3Q8NDX5 983 aa17.81■□□□□ 0.44
USB1-213ENST00000566292 ATG4AQ8WYN0 398 aa17.81■□□□□ 0.44
USB1-213ENST00000566292 EPN3Q9H201 632 aa17.81■□□□□ 0.44
USB1-213ENST00000566292 SNRNP200O75643 2136 aaKnown RBP17.81■□□□□ 0.44
USB1-213ENST00000566292 NBASA2RRP1 2371 aa17.81■□□□□ 0.44
USB1-213ENST00000566292 TNRC6AQ8NDV7 1962 aaKnown RBP17.8■□□□□ 0.44
USB1-213ENST00000566292 MED13Q9UHV7 2174 aa17.8■□□□□ 0.44
USB1-213ENST00000566292 SPENQ96T58 3664 aaKnown RBP17.8■□□□□ 0.44
USB1-213ENST00000566292 PIPSLA2A3N6 862 aa17.8■□□□□ 0.44
USB1-213ENST00000566292 CCDC78A2IDD5 438 aa17.8■□□□□ 0.44
USB1-213ENST00000566292 MROH6A6NGR9 719 aa17.8■□□□□ 0.44
USB1-213ENST00000566292 OR51F1A6NGY5 319 aa17.8■□□□□ 0.44
USB1-213ENST00000566292 SLC9B1P1A6NJY1 282 aa17.8■□□□□ 0.44
USB1-213ENST00000566292 BTN3A3O00478 584 aa17.8■□□□□ 0.44
USB1-213ENST00000566292 SCRG1O75711 98 aa17.8■□□□□ 0.44
USB1-213ENST00000566292 RECKO95980 971 aa17.8■□□□□ 0.44
USB1-213ENST00000566292 PREPP48147 710 aa17.8■□□□□ 0.44
USB1-213ENST00000566292 RPS18P62269 152 aaKnown RBP17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms