RNA–Protein interactions for RNA: ENST00000565471.6

CLN6-206, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,075 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-206ENST00000565471 KCND3Q9UK17 655 aa19.37■□□□□ 0.69
CLN6-206ENST00000565471 PADI1Q9ULC6 663 aa19.37■□□□□ 0.69
CLN6-206ENST00000565471 PCDHGA6Q9Y5G7 932 aa19.37■□□□□ 0.69
CLN6-206ENST00000565471 OR6C74A6NCV1 312 aa19.36■□□□□ 0.69
CLN6-206ENST00000565471 MROH6A6NGR9 719 aa19.36■□□□□ 0.69
CLN6-206ENST00000565471 ERI2A8K979 691 aaKnown RBP19.36■□□□□ 0.69
CLN6-206ENST00000565471 MATN2O00339 956 aa19.36■□□□□ 0.69
CLN6-206ENST00000565471 SUV39H1O43463 412 aa19.36■□□□□ 0.69
CLN6-206ENST00000565471 AP2A2O94973 939 aa19.36■□□□□ 0.69
CLN6-206ENST00000565471 ZIC2O95409 532 aaPredicted RBP19.36■□□□□ 0.69
CLN6-206ENST00000565471 ZBTB11O95625 1053 aaPredicted RBP19.36■□□□□ 0.69
CLN6-206ENST00000565471 CCNYL3P0C7X3 344 aa19.36■□□□□ 0.69
CLN6-206ENST00000565471 EBLN1P0CF75 366 aa19.36■□□□□ 0.69
CLN6-206ENST00000565471 STIP1P31948 543 aaKnown RBP19.36■□□□□ 0.69
CLN6-206ENST00000565471 CD151P48509 253 aa19.36■□□□□ 0.69
CLN6-206ENST00000565471 RPA4Q13156 261 aa19.36■□□□□ 0.69
CLN6-206ENST00000565471 SEPT6Q14141 434 aa19.36■□□□□ 0.69
CLN6-206ENST00000565471 KRT33BQ14525 404 aa19.36■□□□□ 0.69
CLN6-206ENST00000565471 KCNAB1Q14722 419 aa19.36■□□□□ 0.69
CLN6-206ENST00000565471 POU6F1Q14863 301 aa19.36■□□□□ 0.69
CLN6-206ENST00000565471 ATG14Q6ZNE5 492 aa19.36■□□□□ 0.69
CLN6-206ENST00000565471 SPC24Q8NBT2 197 aa19.36■□□□□ 0.69
CLN6-206ENST00000565471 APOBEC4Q8WW27 367 aaKnown RBP19.36■□□□□ 0.69
CLN6-206ENST00000565471 TSGA10Q9BZW7 698 aa19.36■□□□□ 0.69
CLN6-206ENST00000565471 OR52A5Q9H2C5 316 aa19.36■□□□□ 0.69
CLN6-206ENST00000565471 FGF21Q9NSA1 209 aa19.36■□□□□ 0.69
CLN6-206ENST00000565471 PCDHB3Q9Y5E6 796 aa19.36■□□□□ 0.69
CLN6-206ENST00000565471 MRPS18BQ9Y676 258 aaKnown RBP19.36■□□□□ 0.69
CLN6-206ENST00000565471 TLN1Q9Y490 2541 aaKnown RBP19.35■□□□□ 0.69
CLN6-206ENST00000565471 TIAF1O95411 115 aa19.35■□□□□ 0.69
CLN6-206ENST00000565471 RECKO95980 971 aa19.35■□□□□ 0.69
CLN6-206ENST00000565471 KPNA2P52292 529 aaKnown RBP19.35■□□□□ 0.69
CLN6-206ENST00000565471 TUBB4BP68371 445 aa19.35■□□□□ 0.69
CLN6-206ENST00000565471 NFKB2Q00653 900 aa19.35■□□□□ 0.69
CLN6-206ENST00000565471 PRKAA1Q13131 559 aa19.35■□□□□ 0.69
CLN6-206ENST00000565471 TUBB2AQ13885 445 aa19.35■□□□□ 0.69
CLN6-206ENST00000565471 OASLQ15646 514 aaKnown RBP19.35■□□□□ 0.69
CLN6-206ENST00000565471 SEL1L2Q5TEA6 688 aa19.35■□□□□ 0.69
CLN6-206ENST00000565471 PWWP2BQ6NUJ5 590 aa19.35■□□□□ 0.69
CLN6-206ENST00000565471 C16orf46Q6P387 395 aa19.35■□□□□ 0.69
CLN6-206ENST00000565471 ZNF449Q6P9G9 518 aa19.35■□□□□ 0.69
CLN6-206ENST00000565471 CERS6Q6ZMG9 384 aa19.35■□□□□ 0.69
CLN6-206ENST00000565471 TAS2R42Q7RTR8 314 aa19.35■□□□□ 0.69
CLN6-206ENST00000565471 OR8K5Q8NH50 307 aa19.35■□□□□ 0.69
CLN6-206ENST00000565471 RNF31Q96EP0 1072 aa19.35■□□□□ 0.69
CLN6-206ENST00000565471 ALS2CR12Q96Q35 445 aa19.35■□□□□ 0.69
CLN6-206ENST00000565471 TUBB2BQ9BVA1 445 aa19.35■□□□□ 0.69
CLN6-206ENST00000565471 LHX9Q9NQ69 397 aa19.35■□□□□ 0.69
CLN6-206ENST00000565471 POMT2Q9UKY4 750 aa19.35■□□□□ 0.69
CLN6-206ENST00000565471 BTRCQ9Y297 605 aa19.35■□□□□ 0.69
CLN6-206ENST00000565471 SPTA1P02549 2419 aa19.34■□□□□ 0.69
CLN6-206ENST00000565471 GOLGA6L6A8MZA4 724 aa19.34■□□□□ 0.69
CLN6-206ENST00000565471 C21orf140B9A014 251 aa19.34■□□□□ 0.69
CLN6-206ENST00000565471 IFRD1O00458 451 aaPredicted RBP19.34■□□□□ 0.69
CLN6-206ENST00000565471 LIASO43766 372 aa19.34■□□□□ 0.69
CLN6-206ENST00000565471 ITIH4Q14624 930 aa19.34■□□□□ 0.69
CLN6-206ENST00000565471 DBN1Q16643 649 aa19.34■□□□□ 0.69
CLN6-206ENST00000565471 SKIDA1Q1XH10 827 aa19.34■□□□□ 0.69
CLN6-206ENST00000565471 DEFB109BQ30KR1 87 aa19.34■□□□□ 0.69
CLN6-206ENST00000565471 TMTC4Q5T4D3 741 aa19.34■□□□□ 0.69
CLN6-206ENST00000565471 PIANPQ8IYJ0 282 aa19.34■□□□□ 0.69
CLN6-206ENST00000565471 OR4E2Q8NGC2 313 aa19.34■□□□□ 0.69
CLN6-206ENST00000565471 ATG4AQ8WYN0 398 aa19.34■□□□□ 0.69
CLN6-206ENST00000565471 FERD3LQ96RJ6 166 aa19.34■□□□□ 0.69
CLN6-206ENST00000565471 SRMSQ9H3Y6 488 aa19.34■□□□□ 0.69
CLN6-206ENST00000565471 MVB12BQ9H7P6 319 aa19.34■□□□□ 0.69
CLN6-206ENST00000565471 PIH1D1Q9NWS0 290 aaKnown RBP19.34■□□□□ 0.69
CLN6-206ENST00000565471 QSOX1O00391 747 aa19.33■□□□□ 0.68
CLN6-206ENST00000565471 WISP1O95388 367 aa19.33■□□□□ 0.68
CLN6-206ENST00000565471 PRSS56P0CW18 603 aa19.33■□□□□ 0.68
CLN6-206ENST00000565471 POLR2CP19387 275 aaPredicted RBP19.33■□□□□ 0.68
CLN6-206ENST00000565471 FDFT1P37268 417 aa19.33■□□□□ 0.68
CLN6-206ENST00000565471 NSG1P42857 185 aa19.33■□□□□ 0.68
CLN6-206ENST00000565471 CDH17Q12864 832 aa19.33■□□□□ 0.68
CLN6-206ENST00000565471 DNASE1L3Q13609 305 aa19.33■□□□□ 0.68
CLN6-206ENST00000565471 ATP1A1-AS1Q5TC04 95 aa19.33■□□□□ 0.68
CLN6-206ENST00000565471 PACS1Q6VY07 963 aa19.33■□□□□ 0.68
CLN6-206ENST00000565471 CLDN19Q8N6F1 224 aa19.33■□□□□ 0.68
CLN6-206ENST00000565471 OR52K1Q8NGK4 314 aa19.33■□□□□ 0.68
CLN6-206ENST00000565471 CT55Q8WUE5 264 aa19.33■□□□□ 0.68
CLN6-206ENST00000565471 LCN9Q8WX39 176 aa19.33■□□□□ 0.68
CLN6-206ENST00000565471 ZNF501Q96CX3 271 aaPredicted RBP19.33■□□□□ 0.68
CLN6-206ENST00000565471 TFB2MQ9H5Q4 396 aaKnown RBP19.33■□□□□ 0.68
CLN6-206ENST00000565471 LATS2Q9NRM7 1088 aa19.33■□□□□ 0.68
CLN6-206ENST00000565471 C1GALT1Q9NS00 363 aa19.33■□□□□ 0.68
CLN6-206ENST00000565471 LIN7AO14910 233 aaPredicted RBP19.32■□□□□ 0.68
CLN6-206ENST00000565471 KRT86O43790 486 aa19.32■□□□□ 0.68
CLN6-206ENST00000565471 CPNE3O75131 537 aaKnown RBP19.32■□□□□ 0.68
CLN6-206ENST00000565471 KATNA1O75449 491 aa19.32■□□□□ 0.68
CLN6-206ENST00000565471 CREG1O75629 220 aa19.32■□□□□ 0.68
CLN6-206ENST00000565471 SUN1O94901 812 aa19.32■□□□□ 0.68
CLN6-206ENST00000565471 GAS8O95995 478 aa19.32■□□□□ 0.68
CLN6-206ENST00000565471 MSNP26038 577 aaKnown RBP19.32■□□□□ 0.68
CLN6-206ENST00000565471 FOXN2P32314 431 aa19.32■□□□□ 0.68
CLN6-206ENST00000565471 ARCN1P48444 511 aaKnown RBP19.32■□□□□ 0.68
CLN6-206ENST00000565471 LAMB3Q13751 1172 aa19.32■□□□□ 0.68
CLN6-206ENST00000565471 BOP1Q14137 746 aaKnown RBP19.32■□□□□ 0.68
CLN6-206ENST00000565471 MICALCLQ6ZW33 695 aa19.32■□□□□ 0.68
CLN6-206ENST00000565471 SLC13A5Q86YT5 568 aaPredicted RBP19.32■□□□□ 0.68
CLN6-206ENST00000565471 TAB3Q8N5C8 712 aaPredicted RBP19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms