RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 TEFMQ96QE5 360 aaKnown RBP17.91■□□□□ 0.46
SYNGR3-204ENST00000564642 FERD3LQ96RJ6 166 aa17.91■□□□□ 0.46
SYNGR3-204ENST00000564642 KIR3DX1Q9H7L2 352 aa17.91■□□□□ 0.46
SYNGR3-204ENST00000564642 FBXO8Q9NRD0 319 aa17.91■□□□□ 0.46
SYNGR3-204ENST00000564642 SSUH2Q9Y2M2 353 aa17.91■□□□□ 0.46
SYNGR3-204ENST00000564642 PRSS21Q9Y6M0 314 aa17.91■□□□□ 0.46
SYNGR3-204ENST00000564642 TCRBV7S3A2A0A539 114 aa17.9■□□□□ 0.46
SYNGR3-204ENST00000564642 LIN7AO14910 233 aaPredicted RBP17.9■□□□□ 0.46
SYNGR3-204ENST00000564642 POLR1CO15160 346 aaPredicted RBP17.9■□□□□ 0.46
SYNGR3-204ENST00000564642 MGAT1P26572 445 aa17.9■□□□□ 0.46
SYNGR3-204ENST00000564642 CD151P48509 253 aa17.9■□□□□ 0.46
SYNGR3-204ENST00000564642 VAC14Q08AM6 782 aa17.9■□□□□ 0.46
SYNGR3-204ENST00000564642 AARS2Q5JTZ9 985 aaKnown RBP17.9■□□□□ 0.46
SYNGR3-204ENST00000564642 ANKS6Q68DC2 871 aa17.9■□□□□ 0.46
SYNGR3-204ENST00000564642 OOSP2Q86WS3 158 aa17.9■□□□□ 0.46
SYNGR3-204ENST00000564642 ELMO1Q92556 727 aa17.9■□□□□ 0.46
SYNGR3-204ENST00000564642 PMEPA1Q969W9 287 aa17.9■□□□□ 0.46
SYNGR3-204ENST00000564642 CTRCQ99895 268 aa17.9■□□□□ 0.46
SYNGR3-204ENST00000564642 ZPBPQ9BS86 351 aa17.9■□□□□ 0.46
SYNGR3-204ENST00000564642 OR52A5Q9H2C5 316 aa17.9■□□□□ 0.46
SYNGR3-204ENST00000564642 ZNF768Q9H5H4 540 aaKnown RBP17.9■□□□□ 0.46
SYNGR3-204ENST00000564642 CATSPERZQ9NTU4 200 aa17.9■□□□□ 0.46
SYNGR3-204ENST00000564642 SLC24A2Q9UI40 661 aa17.9■□□□□ 0.46
SYNGR3-204ENST00000564642 ITPR1Q14643 2758 aa17.89■□□□□ 0.45
SYNGR3-204ENST00000564642 TEX51A0A1B0GUA7 166 aa17.89■□□□□ 0.45
SYNGR3-204ENST00000564642 ZNF185O15231 689 aa17.89■□□□□ 0.45
SYNGR3-204ENST00000564642 OR1I1O60431 355 aa17.89■□□□□ 0.45
SYNGR3-204ENST00000564642 PHF2O75151 1096 aa17.89■□□□□ 0.45
SYNGR3-204ENST00000564642 TCP1P17987 556 aaKnown RBP17.89■□□□□ 0.45
SYNGR3-204ENST00000564642 NMBRP28336 390 aa17.89■□□□□ 0.45
SYNGR3-204ENST00000564642 PDHA2P29803 388 aa17.89■□□□□ 0.45
SYNGR3-204ENST00000564642 PREPP48147 710 aa17.89■□□□□ 0.45
SYNGR3-204ENST00000564642 FOXM1Q08050 763 aa17.89■□□□□ 0.45
SYNGR3-204ENST00000564642 BRD3Q15059 726 aa17.89■□□□□ 0.45
SYNGR3-204ENST00000564642 ZNF658BQ4V348 819 aaPredicted RBP17.89■□□□□ 0.45
SYNGR3-204ENST00000564642 MANEAQ5SRI9 462 aa17.89■□□□□ 0.45
SYNGR3-204ENST00000564642 ZNF534Q76KX8 674 aa17.89■□□□□ 0.45
SYNGR3-204ENST00000564642 PRSS42Q7Z5A4 293 aa17.89■□□□□ 0.45
SYNGR3-204ENST00000564642 DTX1Q86Y01 620 aa17.89■□□□□ 0.45
SYNGR3-204ENST00000564642 ACVR1CQ8NER5 493 aa17.89■□□□□ 0.45
SYNGR3-204ENST00000564642 TSSK1BQ9BXA7 367 aa17.89■□□□□ 0.45
SYNGR3-204ENST00000564642 TREX1Q9NSU2 369 aa17.89■□□□□ 0.45
SYNGR3-204ENST00000564642 HRASLS2Q9NWW9 162 aa17.89■□□□□ 0.45
SYNGR3-204ENST00000564642 SYBUQ9NX95 663 aa17.89■□□□□ 0.45
SYNGR3-204ENST00000564642 SDK2Q58EX2 2172 aa17.89■□□□□ 0.45
SYNGR3-204ENST00000564642 OR6C74A6NCV1 312 aa17.88■□□□□ 0.45
SYNGR3-204ENST00000564642 OR5K3A6NET4 321 aa17.88■□□□□ 0.45
SYNGR3-204ENST00000564642 USP27XA6NNY8 438 aa17.88■□□□□ 0.45
SYNGR3-204ENST00000564642 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.88■□□□□ 0.45
SYNGR3-204ENST00000564642 CD3EAPO15446 510 aaKnown RBP17.88■□□□□ 0.45
SYNGR3-204ENST00000564642 KIF1CO43896 1103 aaKnown RBP17.88■□□□□ 0.45
SYNGR3-204ENST00000564642 TTPAP49638 278 aa17.88■□□□□ 0.45
SYNGR3-204ENST00000564642 ATP1A2P50993 1020 aa17.88■□□□□ 0.45
SYNGR3-204ENST00000564642 PLOD1Q02809 727 aaPredicted RBP17.88■□□□□ 0.45
SYNGR3-204ENST00000564642 SEMA3AQ14563 771 aa17.88■□□□□ 0.45
SYNGR3-204ENST00000564642 KCNJ11Q14654 390 aa17.88■□□□□ 0.45
SYNGR3-204ENST00000564642 SYTL3Q4VX76 610 aa17.88■□□□□ 0.45
SYNGR3-204ENST00000564642 PHC3Q8NDX5 983 aa17.88■□□□□ 0.45
SYNGR3-204ENST00000564642 OR4E2Q8NGC2 313 aa17.88■□□□□ 0.45
SYNGR3-204ENST00000564642 TFGQ92734 400 aaPredicted RBP17.88■□□□□ 0.45
SYNGR3-204ENST00000564642 KIFC1Q9BW19 673 aa17.88■□□□□ 0.45
SYNGR3-204ENST00000564642 MVB12BQ9H7P6 319 aa17.88■□□□□ 0.45
SYNGR3-204ENST00000564642 MRM3Q9HC36 420 aaKnown RBP17.88■□□□□ 0.45
SYNGR3-204ENST00000564642 UBA6A0AVT1 1052 aaPredicted RBP17.87■□□□□ 0.45
SYNGR3-204ENST00000564642 K7ENP7 123 aa17.87■□□□□ 0.45
SYNGR3-204ENST00000564642 MAGEA6P43360 314 aa17.87■□□□□ 0.45
SYNGR3-204ENST00000564642 FNTAP49354 379 aa17.87■□□□□ 0.45
SYNGR3-204ENST00000564642 GNG11P61952 73 aa17.87■□□□□ 0.45
SYNGR3-204ENST00000564642 PPP1CAP62136 330 aa17.87■□□□□ 0.45
SYNGR3-204ENST00000564642 PRKAA1Q13131 559 aa17.87■□□□□ 0.45
SYNGR3-204ENST00000564642 BOP1Q14137 746 aaKnown RBP17.87■□□□□ 0.45
SYNGR3-204ENST00000564642 DNTTIP2Q5QJE6 756 aaKnown RBP17.87■□□□□ 0.45
SYNGR3-204ENST00000564642 CASC4Q6P4E1 433 aa17.87■□□□□ 0.45
SYNGR3-204ENST00000564642 CYB5D1Q6P9G0 228 aa17.87■□□□□ 0.45
SYNGR3-204ENST00000564642 INO80CQ6PI98 192 aaPredicted RBP17.87■□□□□ 0.45
SYNGR3-204ENST00000564642 LDB1Q86U70 411 aaPredicted RBP17.87■□□□□ 0.45
SYNGR3-204ENST00000564642 OTUD6BQ8N6M0 293 aa17.87■□□□□ 0.45
SYNGR3-204ENST00000564642 IL22RA1Q8N6P7 574 aa17.87■□□□□ 0.45
SYNGR3-204ENST00000564642 LCN9Q8WX39 176 aa17.87■□□□□ 0.45
SYNGR3-204ENST00000564642 KLHL6Q8WZ60 621 aa17.87■□□□□ 0.45
SYNGR3-204ENST00000564642 CPT1BQ92523 772 aa17.87■□□□□ 0.45
SYNGR3-204ENST00000564642 UBXN4Q92575 508 aa17.87■□□□□ 0.45
SYNGR3-204ENST00000564642 MFSD3Q96ES6 412 aa17.87■□□□□ 0.45
SYNGR3-204ENST00000564642 UBL7Q96S82 380 aaPredicted RBP17.87■□□□□ 0.45
SYNGR3-204ENST00000564642 CD180Q99467 661 aa17.87■□□□□ 0.45
SYNGR3-204ENST00000564642 SRMSQ9H3Y6 488 aa17.87■□□□□ 0.45
SYNGR3-204ENST00000564642 APMAPQ9HDC9 416 aa17.87■□□□□ 0.45
SYNGR3-204ENST00000564642 SAMD15Q9P1V8 674 aa17.87■□□□□ 0.45
SYNGR3-204ENST00000564642 SOX13Q9UN79 622 aa17.87■□□□□ 0.45
SYNGR3-204ENST00000564642 NBEAQ8NFP9 2946 aa17.87■□□□□ 0.45
SYNGR3-204ENST00000564642 AVILO75366 819 aa17.86■□□□□ 0.45
SYNGR3-204ENST00000564642 VAPBO95292 243 aa17.86■□□□□ 0.45
SYNGR3-204ENST00000564642 ITGB6P18564 788 aa17.86■□□□□ 0.45
SYNGR3-204ENST00000564642 ARL4DP49703 201 aa17.86■□□□□ 0.45
SYNGR3-204ENST00000564642 PPP1R7Q15435 360 aa17.86■□□□□ 0.45
SYNGR3-204ENST00000564642 ANKRD22Q5VYY1 191 aa17.86■□□□□ 0.45
SYNGR3-204ENST00000564642 ARMC3Q5W041 872 aa17.86■□□□□ 0.45
SYNGR3-204ENST00000564642 CES3Q6UWW8 571 aa17.86■□□□□ 0.45
SYNGR3-204ENST00000564642 NAPRTQ6XQN6 538 aa17.86■□□□□ 0.45
SYNGR3-204ENST00000564642 SIDT2Q8NBJ9 832 aaKnown RBP17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms