RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 FOLR1P15328 257 aa14.62□□□□□ -0.07
SPG7-210ENST00000564409 F8A1P23610 371 aa14.62□□□□□ -0.07
SPG7-210ENST00000564409 PSMA3P25788 255 aa14.62□□□□□ -0.07
SPG7-210ENST00000564409 ACRV1P26436 265 aa14.62□□□□□ -0.07
SPG7-210ENST00000564409 KLF1Q13351 362 aaPredicted RBP14.62□□□□□ -0.07
SPG7-210ENST00000564409 DNASE1L3Q13609 305 aa14.62□□□□□ -0.07
SPG7-210ENST00000564409 LAMB3Q13751 1172 aa14.62□□□□□ -0.07
SPG7-210ENST00000564409 DEFB109BQ30KR1 87 aa14.62□□□□□ -0.07
SPG7-210ENST00000564409 PWWP2BQ6NUJ5 590 aa14.62□□□□□ -0.07
SPG7-210ENST00000564409 C16orf46Q6P387 395 aa14.62□□□□□ -0.07
SPG7-210ENST00000564409 ACRBPQ8NEB7 543 aa14.62□□□□□ -0.07
SPG7-210ENST00000564409 STYXQ8WUJ0 223 aa14.62□□□□□ -0.07
SPG7-210ENST00000564409 RMDN2Q96LZ7 410 aa14.62□□□□□ -0.07
SPG7-210ENST00000564409 ALS2CR12Q96Q35 445 aa14.62□□□□□ -0.07
SPG7-210ENST00000564409 FRMD8P1Q9BZ68 369 aaPredicted RBP14.62□□□□□ -0.07
SPG7-210ENST00000564409 RBSNQ9H1K0 784 aa14.62□□□□□ -0.07
SPG7-210ENST00000564409 MVB12BQ9H7P6 319 aa14.62□□□□□ -0.07
SPG7-210ENST00000564409 C1GALT1Q9NS00 363 aa14.62□□□□□ -0.07
SPG7-210ENST00000564409 KCNMB2Q9Y691 235 aa14.62□□□□□ -0.07
SPG7-210ENST00000564409 CFAP20Q9Y6A4 193 aaKnown RBP14.62□□□□□ -0.07
SPG7-210ENST00000564409 TENM4Q6N022 2769 aa14.61□□□□□ -0.07
SPG7-210ENST00000564409 CPNE3O75131 537 aaKnown RBP14.61□□□□□ -0.07
SPG7-210ENST00000564409 AP2A1O95782 977 aa14.61□□□□□ -0.07
SPG7-210ENST00000564409 POLBP06746 335 aa14.61□□□□□ -0.07
SPG7-210ENST00000564409 STIP1P31948 543 aaKnown RBP14.61□□□□□ -0.07
SPG7-210ENST00000564409 MC4RP32245 332 aa14.61□□□□□ -0.07
SPG7-210ENST00000564409 CASRP41180 1078 aa14.61□□□□□ -0.07
SPG7-210ENST00000564409 PPP1CAP62136 330 aa14.61□□□□□ -0.07
SPG7-210ENST00000564409 CACNG1Q06432 222 aa14.61□□□□□ -0.07
SPG7-210ENST00000564409 OLIG2Q13516 323 aa14.61□□□□□ -0.07
SPG7-210ENST00000564409 SKIDA1Q1XH10 827 aa14.61□□□□□ -0.07
SPG7-210ENST00000564409 RNF10Q8N5U6 811 aaKnown RBP14.61□□□□□ -0.07
SPG7-210ENST00000564409 FAM71DQ8N9W8 422 aa14.61□□□□□ -0.07
SPG7-210ENST00000564409 SPDYE1Q8NFV5 336 aaPredicted RBP14.61□□□□□ -0.07
SPG7-210ENST00000564409 SLC35B2Q8TB61 432 aa14.61□□□□□ -0.07
SPG7-210ENST00000564409 LCN9Q8WX39 176 aa14.61□□□□□ -0.07
SPG7-210ENST00000564409 ELMO2Q96JJ3 720 aa14.61□□□□□ -0.07
SPG7-210ENST00000564409 DNAJC1Q96KC8 554 aaKnown RBP14.61□□□□□ -0.07
SPG7-210ENST00000564409 LRFN5Q96NI6 719 aa14.61□□□□□ -0.07
SPG7-210ENST00000564409 FAM118BQ9BPY3 351 aa14.61□□□□□ -0.07
SPG7-210ENST00000564409 SRMSQ9H3Y6 488 aa14.61□□□□□ -0.07
SPG7-210ENST00000564409 TFB2MQ9H5Q4 396 aaKnown RBP14.61□□□□□ -0.07
SPG7-210ENST00000564409 FANCEQ9HB96 536 aa14.61□□□□□ -0.07
SPG7-210ENST00000564409 KCND1Q9NSA2 647 aa14.61□□□□□ -0.07
SPG7-210ENST00000564409 SETXQ7Z333 2677 aaKnown RBP14.6□□□□□ -0.07
SPG7-210ENST00000564409 SPTBP11277 2137 aa14.6□□□□□ -0.07
SPG7-210ENST00000564409 PIPSLA2A3N6 862 aa14.6□□□□□ -0.07
SPG7-210ENST00000564409 F8W8V4 182 aa14.6□□□□□ -0.07
SPG7-210ENST00000564409 MKRN2OSH3BPM6 223 aa14.6□□□□□ -0.07
SPG7-210ENST00000564409 KATNA1O75449 491 aa14.6□□□□□ -0.07
SPG7-210ENST00000564409 GAS8O95995 478 aa14.6□□□□□ -0.07
SPG7-210ENST00000564409 EBLN1P0CF75 366 aa14.6□□□□□ -0.07
SPG7-210ENST00000564409 GSDMDP57764 484 aa14.6□□□□□ -0.07
SPG7-210ENST00000564409 TMPRSS15P98073 1019 aa14.6□□□□□ -0.07
SPG7-210ENST00000564409 NFKB2Q00653 900 aa14.6□□□□□ -0.07
SPG7-210ENST00000564409 PLOD1Q02809 727 aaPredicted RBP14.6□□□□□ -0.07
SPG7-210ENST00000564409 ERV3-1Q14264 604 aa14.6□□□□□ -0.07
SPG7-210ENST00000564409 SPARCL1Q14515 664 aa14.6□□□□□ -0.07
SPG7-210ENST00000564409 LACTB2Q53H82 288 aaPredicted RBP14.6□□□□□ -0.07
SPG7-210ENST00000564409 ZRANB3Q5FWF4 1079 aa14.6□□□□□ -0.07
SPG7-210ENST00000564409 AADACL2Q6P093 401 aa14.6□□□□□ -0.07
SPG7-210ENST00000564409 TAS2R42Q7RTR8 314 aa14.6□□□□□ -0.07
SPG7-210ENST00000564409 SERPINA9Q86WD7 417 aa14.6□□□□□ -0.07
SPG7-210ENST00000564409 OR4E2Q8NGC2 313 aa14.6□□□□□ -0.07
SPG7-210ENST00000564409 CT55Q8WUE5 264 aa14.6□□□□□ -0.07
SPG7-210ENST00000564409 THAP4Q8WY91 577 aa14.6□□□□□ -0.07
SPG7-210ENST00000564409 ABHD17AQ96GS6 310 aa14.6□□□□□ -0.07
SPG7-210ENST00000564409 CDKN2AIPNLQ96HQ2 116 aa14.6□□□□□ -0.07
SPG7-210ENST00000564409 HES6Q96HZ4 224 aa14.6□□□□□ -0.07
SPG7-210ENST00000564409 TWSG1Q9GZX9 223 aa14.6□□□□□ -0.07
SPG7-210ENST00000564409 OR52A5Q9H2C5 316 aa14.6□□□□□ -0.07
SPG7-210ENST00000564409 FAM96AQ9H5X1 160 aa14.6□□□□□ -0.07
SPG7-210ENST00000564409 COG4Q9H9E3 785 aa14.6□□□□□ -0.07
SPG7-210ENST00000564409 FAM8A1Q9UBU6 413 aa14.6□□□□□ -0.07
SPG7-210ENST00000564409 POMT2Q9UKY4 750 aa14.6□□□□□ -0.07
SPG7-210ENST00000564409 MRPS18BQ9Y676 258 aaKnown RBP14.6□□□□□ -0.07
SPG7-210ENST00000564409 MROH6A6NGR9 719 aa14.59□□□□□ -0.07
SPG7-210ENST00000564409 LIN7AO14910 233 aaPredicted RBP14.59□□□□□ -0.07
SPG7-210ENST00000564409 DDX3YO15523 660 aaKnown RBP14.59□□□□□ -0.07
SPG7-210ENST00000564409 SCRG1O75711 98 aa14.59□□□□□ -0.07
SPG7-210ENST00000564409 METTL18O95568 372 aa14.59□□□□□ -0.07
SPG7-210ENST00000564409 KLK3P07288 261 aaPredicted RBP14.59□□□□□ -0.07
SPG7-210ENST00000564409 PTPN4P29074 926 aa14.59□□□□□ -0.07
SPG7-210ENST00000564409 NSG1P42857 185 aa14.59□□□□□ -0.07
SPG7-210ENST00000564409 KPNA2P52292 529 aaKnown RBP14.59□□□□□ -0.07
SPG7-210ENST00000564409 PMS2P54278 862 aa14.59□□□□□ -0.07
SPG7-210ENST00000564409 RPS15P62841 145 aaKnown RBP14.59□□□□□ -0.07
SPG7-210ENST00000564409 TLE1Q04724 770 aa14.59□□□□□ -0.07
SPG7-210ENST00000564409 ITIH4Q14624 930 aa14.59□□□□□ -0.07
SPG7-210ENST00000564409 KCNAB1Q14722 419 aa14.59□□□□□ -0.07
SPG7-210ENST00000564409 ZNF658BQ4V348 819 aaPredicted RBP14.59□□□□□ -0.07
SPG7-210ENST00000564409 LYPLAL1Q5VWZ2 237 aa14.59□□□□□ -0.07
SPG7-210ENST00000564409 TCTN3Q6NUS6 607 aa14.59□□□□□ -0.07
SPG7-210ENST00000564409 DUS1LQ6P1R4 473 aaKnown RBP14.59□□□□□ -0.07
SPG7-210ENST00000564409 PACS1Q6VY07 963 aa14.59□□□□□ -0.07
SPG7-210ENST00000564409 ZNF517Q6ZMY9 492 aaPredicted RBP14.59□□□□□ -0.07
SPG7-210ENST00000564409 SYVN1Q86TM6 617 aa14.59□□□□□ -0.07
SPG7-210ENST00000564409 TMEM126BQ8IUX1 230 aa14.59□□□□□ -0.07
SPG7-210ENST00000564409 TMEM139Q8IV31 216 aa14.59□□□□□ -0.07
SPG7-210ENST00000564409 APLFQ8IW19 511 aaPredicted RBP14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms