RNA–Protein interactions for RNA: ENST00000563939.2

CBFB-204, Transcript of core-binding factor subunit beta, humanhuman

TSL 4

Gene CBFB, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBFB-204ENST00000563939 CCDC137Q6PK04 289 aaKnown RBP18.73■□□□□ 0.59
CBFB-204ENST00000563939 PACS1Q6VY07 963 aa18.73■□□□□ 0.59
CBFB-204ENST00000563939 DTX1Q86Y01 620 aa18.73■□□□□ 0.59
CBFB-204ENST00000563939 ELMO1Q92556 727 aa18.73■□□□□ 0.59
CBFB-204ENST00000563939 PEX13Q92968 403 aa18.73■□□□□ 0.59
CBFB-204ENST00000563939 RAB33BQ9H082 229 aa18.73■□□□□ 0.59
CBFB-204ENST00000563939 OR52A5Q9H2C5 316 aa18.73■□□□□ 0.59
CBFB-204ENST00000563939 APMAPQ9HDC9 416 aa18.73■□□□□ 0.59
CBFB-204ENST00000563939 ZNF106Q9H2Y7 1883 aaKnown RBP18.72■□□□□ 0.59
CBFB-204ENST00000563939 UBA6A0AVT1 1052 aaPredicted RBP18.72■□□□□ 0.59
CBFB-204ENST00000563939 EIF4E1BA6NMX2 242 aaKnown RBP18.72■□□□□ 0.59
CBFB-204ENST00000563939 K7ENP7 123 aa18.72■□□□□ 0.59
CBFB-204ENST00000563939 ZNF185O15231 689 aa18.72■□□□□ 0.59
CBFB-204ENST00000563939 CD3EAPO15446 510 aaKnown RBP18.72■□□□□ 0.59
CBFB-204ENST00000563939 EFSO43281 561 aa18.72■□□□□ 0.59
CBFB-204ENST00000563939 TPSB2P20231 275 aa18.72■□□□□ 0.59
CBFB-204ENST00000563939 NMBRP28336 390 aa18.72■□□□□ 0.59
CBFB-204ENST00000563939 CD151P48509 253 aa18.72■□□□□ 0.59
CBFB-204ENST00000563939 ARL4DP49703 201 aa18.72■□□□□ 0.59
CBFB-204ENST00000563939 ATP1A2P50993 1020 aa18.72■□□□□ 0.59
CBFB-204ENST00000563939 SH3BP2P78314 561 aa18.72■□□□□ 0.59
CBFB-204ENST00000563939 TPSAB1Q15661 275 aa18.72■□□□□ 0.59
CBFB-204ENST00000563939 SOWAHCQ53LP3 525 aaPredicted RBP18.72■□□□□ 0.59
CBFB-204ENST00000563939 AARS2Q5JTZ9 985 aaKnown RBP18.72■□□□□ 0.59
CBFB-204ENST00000563939 INO80CQ6PI98 192 aaPredicted RBP18.72■□□□□ 0.59
CBFB-204ENST00000563939 NAPRTQ6XQN6 538 aa18.72■□□□□ 0.59
CBFB-204ENST00000563939 ZNF534Q76KX8 674 aa18.72■□□□□ 0.59
CBFB-204ENST00000563939 PRSS42Q7Z5A4 293 aa18.72■□□□□ 0.59
CBFB-204ENST00000563939 LDB1Q86U70 411 aaPredicted RBP18.72■□□□□ 0.59
CBFB-204ENST00000563939 OOSP2Q86WS3 158 aa18.72■□□□□ 0.59
CBFB-204ENST00000563939 IL22RA1Q8N6P7 574 aa18.72■□□□□ 0.59
CBFB-204ENST00000563939 ACVR1CQ8NER5 493 aa18.72■□□□□ 0.59
CBFB-204ENST00000563939 ACTRT1Q8TDG2 376 aa18.72■□□□□ 0.59
CBFB-204ENST00000563939 LCN9Q8WX39 176 aa18.72■□□□□ 0.59
CBFB-204ENST00000563939 TFGQ92734 400 aaPredicted RBP18.72■□□□□ 0.59
CBFB-204ENST00000563939 NKD1Q969G9 470 aa18.72■□□□□ 0.59
CBFB-204ENST00000563939 ELMO2Q96JJ3 720 aa18.72■□□□□ 0.59
CBFB-204ENST00000563939 OR6C1Q96RD1 312 aa18.72■□□□□ 0.59
CBFB-204ENST00000563939 UBL7Q96S82 380 aaPredicted RBP18.72■□□□□ 0.59
CBFB-204ENST00000563939 ZPBPQ9BS86 351 aa18.72■□□□□ 0.59
CBFB-204ENST00000563939 SRMSQ9H3Y6 488 aa18.72■□□□□ 0.59
CBFB-204ENST00000563939 ZNF768Q9H5H4 540 aaKnown RBP18.72■□□□□ 0.59
CBFB-204ENST00000563939 CATSPERZQ9NTU4 200 aa18.72■□□□□ 0.59
CBFB-204ENST00000563939 SNX12Q9UMY4 172 aa18.72■□□□□ 0.59
CBFB-204ENST00000563939 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.71■□□□□ 0.59
CBFB-204ENST00000563939 GOLGA6L10A0A0M3HER8 536 aa18.71■□□□□ 0.59
CBFB-204ENST00000563939 OR5K3A6NET4 321 aa18.71■□□□□ 0.59
CBFB-204ENST00000563939 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.71■□□□□ 0.59
CBFB-204ENST00000563939 LIN7AO14910 233 aaPredicted RBP18.71■□□□□ 0.59
CBFB-204ENST00000563939 AVILO75366 819 aa18.71■□□□□ 0.59
CBFB-204ENST00000563939 ITGB6P18564 788 aa18.71■□□□□ 0.59
CBFB-204ENST00000563939 POLR2CP19387 275 aaPredicted RBP18.71■□□□□ 0.59
CBFB-204ENST00000563939 ARCN1P48444 511 aaKnown RBP18.71■□□□□ 0.59
CBFB-204ENST00000563939 PRKG2Q13237 762 aa18.71■□□□□ 0.59
CBFB-204ENST00000563939 BOP1Q14137 746 aaKnown RBP18.71■□□□□ 0.59
CBFB-204ENST00000563939 SEMA3AQ14563 771 aa18.71■□□□□ 0.59
CBFB-204ENST00000563939 CYP1B1Q16678 543 aa18.71■□□□□ 0.59
CBFB-204ENST00000563939 ZNF658BQ4V348 819 aaPredicted RBP18.71■□□□□ 0.59
CBFB-204ENST00000563939 SYTL3Q4VX76 610 aa18.71■□□□□ 0.59
CBFB-204ENST00000563939 DNTTIP2Q5QJE6 756 aaKnown RBP18.71■□□□□ 0.59
CBFB-204ENST00000563939 CASC4Q6P4E1 433 aa18.71■□□□□ 0.59
CBFB-204ENST00000563939 CES3Q6UWW8 571 aa18.71■□□□□ 0.59
CBFB-204ENST00000563939 CACNA2D3Q8IZS8 1091 aa18.71■□□□□ 0.59
CBFB-204ENST00000563939 OTUD6BQ8N6M0 293 aa18.71■□□□□ 0.59
CBFB-204ENST00000563939 KLHL6Q8WZ60 621 aa18.71■□□□□ 0.59
CBFB-204ENST00000563939 UBXN4Q92575 508 aa18.71■□□□□ 0.59
CBFB-204ENST00000563939 SGSM3Q96HU1 749 aa18.71■□□□□ 0.59
CBFB-204ENST00000563939 MAP3K3Q99759 626 aa18.71■□□□□ 0.59
CBFB-204ENST00000563939 MVB12BQ9H7P6 319 aa18.71■□□□□ 0.59
CBFB-204ENST00000563939 SYBUQ9NX95 663 aa18.71■□□□□ 0.59
CBFB-204ENST00000563939 IGHV5-51A0A0C4DH38 117 aa18.7■□□□□ 0.58
CBFB-204ENST00000563939 USP27XA6NNY8 438 aa18.7■□□□□ 0.58
CBFB-204ENST00000563939 TTPAP49638 278 aa18.7■□□□□ 0.58
CBFB-204ENST00000563939 CSE1LP55060 971 aaKnown RBP18.7■□□□□ 0.58
CBFB-204ENST00000563939 GNG11P61952 73 aa18.7■□□□□ 0.58
CBFB-204ENST00000563939 PRKAA1Q13131 559 aa18.7■□□□□ 0.58
CBFB-204ENST00000563939 KCNJ11Q14654 390 aa18.7■□□□□ 0.58
CBFB-204ENST00000563939 ZSCAN1Q8NBB4 408 aa18.7■□□□□ 0.58
CBFB-204ENST00000563939 SIDT2Q8NBJ9 832 aaKnown RBP18.7■□□□□ 0.58
CBFB-204ENST00000563939 RNF31Q96EP0 1072 aa18.7■□□□□ 0.58
CBFB-204ENST00000563939 KIFC1Q9BW19 673 aa18.7■□□□□ 0.58
CBFB-204ENST00000563939 TSSK1BQ9BXA7 367 aa18.7■□□□□ 0.58
CBFB-204ENST00000563939 TREX1Q9NSU2 369 aa18.7■□□□□ 0.58
CBFB-204ENST00000563939 SIDT1Q9NXL6 827 aaKnown RBP18.7■□□□□ 0.58
CBFB-204ENST00000563939 MARCH4Q9P2E8 410 aaPredicted RBP18.7■□□□□ 0.58
CBFB-204ENST00000563939 GOLGA8MH3BSY2 632 aa18.69■□□□□ 0.58
CBFB-204ENST00000563939 RAD1O60671 282 aa18.69■□□□□ 0.58
CBFB-204ENST00000563939 PHF2O75151 1096 aa18.69■□□□□ 0.58
CBFB-204ENST00000563939 NDUFS3O75489 264 aa18.69■□□□□ 0.58
CBFB-204ENST00000563939 STK17BO94768 372 aa18.69■□□□□ 0.58
CBFB-204ENST00000563939 VAPBO95292 243 aa18.69■□□□□ 0.58
CBFB-204ENST00000563939 NELFEP18615 380 aaKnown RBP18.69■□□□□ 0.58
CBFB-204ENST00000563939 RHDQ02161 417 aa18.69■□□□□ 0.58
CBFB-204ENST00000563939 PLOD1Q02809 727 aaPredicted RBP18.69■□□□□ 0.58
CBFB-204ENST00000563939 IL11RAQ14626 422 aa18.69■□□□□ 0.58
CBFB-204ENST00000563939 TAF1BQ53T94 588 aaPredicted RBP18.69■□□□□ 0.58
CBFB-204ENST00000563939 ANKRD22Q5VYY1 191 aa18.69■□□□□ 0.58
CBFB-204ENST00000563939 KIAA1614Q5VZ46 1190 aa18.69■□□□□ 0.58
CBFB-204ENST00000563939 PTRHD1Q6GMV3 140 aaKnown RBP18.69■□□□□ 0.58
CBFB-204ENST00000563939 SDCCAG8Q86SQ7 713 aaPredicted RBP18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms