RNA–Protein interactions for RNA: ENST00000563525.2

USP31-202, Transcript of ubiquitin specific peptidase 31, humanhuman

TSL 5

Gene USP31, Length 1,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP31-202ENST00000563525 PANX3Q96QZ0 392 aa11.96□□□□□ -0.49
USP31-202ENST00000563525 SYNDIG1Q9H7V2 258 aa11.96□□□□□ -0.49
USP31-202ENST00000563525 NINJ2Q9NZG7 142 aa11.96□□□□□ -0.49
USP31-202ENST00000563525 ZFATQ9P243 1243 aa11.96□□□□□ -0.49
USP31-202ENST00000563525 VPS9D1Q9Y2B5 631 aa11.96□□□□□ -0.49
USP31-202ENST00000563525 MED19A0JLT2 244 aaPredicted RBP11.96□□□□□ -0.5
USP31-202ENST00000563525 GPC4O75487 556 aa11.96□□□□□ -0.5
USP31-202ENST00000563525 SLU7O95391 586 aaKnown RBP11.96□□□□□ -0.5
USP31-202ENST00000563525 RPLP0P05388 317 aaKnown RBP11.96□□□□□ -0.5
USP31-202ENST00000563525 PNLIPP16233 465 aa11.96□□□□□ -0.5
USP31-202ENST00000563525 SPINK2P20155 84 aa11.96□□□□□ -0.5
USP31-202ENST00000563525 CHRM3P20309 590 aa11.96□□□□□ -0.5
USP31-202ENST00000563525 PGGT1BP53609 377 aa11.96□□□□□ -0.5
USP31-202ENST00000563525 TIAL1Q01085 375 aaKnown RBP eCLIP11.96□□□□□ -0.5
USP31-202ENST00000563525 RPA4Q13156 261 aa11.96□□□□□ -0.5
USP31-202ENST00000563525 GPR18Q14330 331 aa11.96□□□□□ -0.5
USP31-202ENST00000563525 EFTUD2Q15029 972 aaKnown RBP eCLIP11.96□□□□□ -0.52e-6■■■■■ 54.8
USP31-202ENST00000563525 AMZ1Q400G9 498 aa11.96□□□□□ -0.5
USP31-202ENST00000563525 HES3Q5TGS1 186 aa11.96□□□□□ -0.5
USP31-202ENST00000563525 NKAIN2Q5VXU1 208 aa11.96□□□□□ -0.5
USP31-202ENST00000563525 KIAA0408Q6ZU52 694 aa11.96□□□□□ -0.5
USP31-202ENST00000563525 TMPRSS9Q7Z410 1059 aa11.96□□□□□ -0.5
USP31-202ENST00000563525 RAB44Q7Z6P3 723 aaPredicted RBP11.96□□□□□ -0.5
USP31-202ENST00000563525 PDZD3Q86UT5 571 aa11.96□□□□□ -0.5
USP31-202ENST00000563525 TRIM48Q8IWZ4 208 aa11.96□□□□□ -0.5
USP31-202ENST00000563525 SIDT2Q8NBJ9 832 aaKnown RBP11.96□□□□□ -0.5
USP31-202ENST00000563525 FBF1Q8TES7 1133 aa11.96□□□□□ -0.5
USP31-202ENST00000563525 TMEM159Q96B96 161 aa11.96□□□□□ -0.5
USP31-202ENST00000563525 ATXN7L3BQ96GX2 97 aa11.96□□□□□ -0.5
USP31-202ENST00000563525 SLC38A3Q99624 504 aa11.96□□□□□ -0.5
USP31-202ENST00000563525 NRTNQ99748 197 aa11.96□□□□□ -0.5
USP31-202ENST00000563525 AARSD1Q9BTE6 412 aaKnown RBP11.96□□□□□ -0.5
USP31-202ENST00000563525 TSSK1BQ9BXA7 367 aa11.96□□□□□ -0.5
USP31-202ENST00000563525 TBC1D10AQ9BXI6 508 aa11.96□□□□□ -0.5
USP31-202ENST00000563525 CDC42EP4Q9H3Q1 356 aaKnown RBP11.96□□□□□ -0.5
USP31-202ENST00000563525 ANKZF1Q9H8Y5 726 aa11.96□□□□□ -0.5
USP31-202ENST00000563525 SLC40A1Q9NP59 571 aa11.96□□□□□ -0.5
USP31-202ENST00000563525 POT1Q9NUX5 634 aa11.96□□□□□ -0.5
USP31-202ENST00000563525 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.96□□□□□ -0.5
USP31-202ENST00000563525 TSR3Q9UJK0 312 aaKnown RBP11.96□□□□□ -0.5
USP31-202ENST00000563525 ATXN7L1Q9ULK2 861 aaPredicted RBP11.96□□□□□ -0.5
USP31-202ENST00000563525 WASF3Q9UPY6 502 aa11.96□□□□□ -0.5
USP31-202ENST00000563525 V9GYY5 206 aaPredicted RBP11.96□□□□□ -0.5
USP31-202ENST00000563525 COL27A1Q8IZC6 1860 aaPredicted RBP11.95□□□□□ -0.5
USP31-202ENST00000563525 IGHV1OR21-1A0A087WYE8 117 aa11.95□□□□□ -0.5
USP31-202ENST00000563525 FAM149AA5PLN7 773 aa11.95□□□□□ -0.5
USP31-202ENST00000563525 FAM159BA6NKW6 160 aa11.95□□□□□ -0.5
USP31-202ENST00000563525 E5RI56 91 aa11.95□□□□□ -0.5
USP31-202ENST00000563525 F8W8V4 182 aa11.95□□□□□ -0.5
USP31-202ENST00000563525 H3BMM5 538 aa11.95□□□□□ -0.5
USP31-202ENST00000563525 NTN3O00634 580 aaPredicted RBP11.95□□□□□ -0.5
USP31-202ENST00000563525 ADRB1P08588 477 aa11.95□□□□□ -0.5
USP31-202ENST00000563525 FAM153BP0C7A2 387 aa11.95□□□□□ -0.5
USP31-202ENST00000563525 ACADLP28330 430 aa11.95□□□□□ -0.5
USP31-202ENST00000563525 CD151P48509 253 aa11.95□□□□□ -0.5
USP31-202ENST00000563525 CLCN7P51798 805 aa11.95□□□□□ -0.5
USP31-202ENST00000563525 PDX1P52945 283 aa11.95□□□□□ -0.5
USP31-202ENST00000563525 E2F1Q01094 437 aa11.95□□□□□ -0.5
USP31-202ENST00000563525 KBTBD12Q3ZCT8 623 aa11.95□□□□□ -0.5
USP31-202ENST00000563525 FAM153CQ494X1 144 aa11.95□□□□□ -0.5
USP31-202ENST00000563525 TMEM26Q6ZUK4 368 aa11.95□□□□□ -0.5
USP31-202ENST00000563525 OTOAQ7RTW8 1153 aa11.95□□□□□ -0.5
USP31-202ENST00000563525 STRA8Q7Z7C7 330 aa11.95□□□□□ -0.5
USP31-202ENST00000563525 GALNT7Q86SF2 657 aa11.95□□□□□ -0.5
USP31-202ENST00000563525 PIM3Q86V86 326 aa11.95□□□□□ -0.5
USP31-202ENST00000563525 RELL1Q8IUW5 271 aa11.95□□□□□ -0.5
USP31-202ENST00000563525 SLC22A15Q8IZD6 547 aa11.95□□□□□ -0.5
USP31-202ENST00000563525 PHC3Q8NDX5 983 aa11.95□□□□□ -0.5
USP31-202ENST00000563525 ACVR1CQ8NER5 493 aa11.95□□□□□ -0.5
USP31-202ENST00000563525 ASZ1Q8WWH4 475 aa11.95□□□□□ -0.5
USP31-202ENST00000563525 KCNJ9Q92806 393 aa11.95□□□□□ -0.5
USP31-202ENST00000563525 GPR21Q99679 349 aa11.95□□□□□ -0.5
USP31-202ENST00000563525 ABCG4Q9H172 646 aa11.95□□□□□ -0.5
USP31-202ENST00000563525 CCDC68Q9H2F9 335 aa11.95□□□□□ -0.5
USP31-202ENST00000563525 LRRN3Q9H3W5 708 aa11.95□□□□□ -0.5
USP31-202ENST00000563525 STN1Q9H668 368 aaKnown RBP11.95□□□□□ -0.5
USP31-202ENST00000563525 RDH14Q9HBH5 336 aa11.95□□□□□ -0.5
USP31-202ENST00000563525 KCNK4Q9NYG8 393 aa11.95□□□□□ -0.5
USP31-202ENST00000563525 RUVBL2Q9Y230 463 aaKnown RBP11.95□□□□□ -0.5
USP31-202ENST00000563525 IFRD1O00458 451 aaPredicted RBP11.94□□□□□ -0.5
USP31-202ENST00000563525 SLCO2B1O94956 709 aa11.94□□□□□ -0.5
USP31-202ENST00000563525 ACSL3O95573 720 aa11.94□□□□□ -0.5
USP31-202ENST00000563525 APOA4P06727 396 aa11.94□□□□□ -0.5
USP31-202ENST00000563525 GSTA2P09210 222 aa11.94□□□□□ -0.5
USP31-202ENST00000563525 CD1CP29017 333 aa11.94□□□□□ -0.5
USP31-202ENST00000563525 CSF2RBP32927 897 aa11.94□□□□□ -0.5
USP31-202ENST00000563525 GPR3P46089 330 aa11.94□□□□□ -0.5
USP31-202ENST00000563525 CDKN2DP55273 166 aa11.94□□□□□ -0.5
USP31-202ENST00000563525 CFHR1Q03591 330 aa11.94□□□□□ -0.5
USP31-202ENST00000563525 GBX1Q14549 363 aa11.94□□□□□ -0.5
USP31-202ENST00000563525 ACSBG2Q5FVE4 666 aa11.94□□□□□ -0.5
USP31-202ENST00000563525 CDCP2Q5VXM1 449 aa11.94□□□□□ -0.5
USP31-202ENST00000563525 USP53Q70EK8 1073 aa11.94□□□□□ -0.5
USP31-202ENST00000563525 CYS1Q717R9 158 aa11.94□□□□□ -0.5
USP31-202ENST00000563525 ZC3HC1Q86WB0 502 aaKnown RBP11.94□□□□□ -0.5
USP31-202ENST00000563525 ZBTB2Q8N680 514 aa11.94□□□□□ -0.5
USP31-202ENST00000563525 GPATCH11Q8N954 259 aa11.94□□□□□ -0.5
USP31-202ENST00000563525 OR5AR1Q8NGP9 310 aa11.94□□□□□ -0.5
USP31-202ENST00000563525 GABPB2Q8TAK5 448 aaPredicted RBP11.94□□□□□ -0.5
USP31-202ENST00000563525 CD200R1Q8TD46 325 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms