RNA–Protein interactions for RNA: ENST00000563367.1

NME3-203, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 3

Gene NME3, Length 891 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-203ENST00000563367 BRD3Q15059 726 aa27.59■■■□□ 2.01
NME3-203ENST00000563367 TGIF1Q15583 401 aa27.59■■■□□ 2.01
NME3-203ENST00000563367 NAT8LQ8N9F0 302 aa27.59■■■□□ 2.01
NME3-203ENST00000563367 PHC3Q8NDX5 983 aa27.59■■■□□ 2.01
NME3-203ENST00000563367 RAB33BQ9H082 229 aa27.59■■■□□ 2.01
NME3-203ENST00000563367 EPHA6Q9UF33 1036 aa27.59■■■□□ 2.01
NME3-203ENST00000563367 ANAPC5Q9UJX4 755 aa27.59■■■□□ 2.01
NME3-203ENST00000563367 PCDHGA3Q9Y5H0 932 aa27.59■■■□□ 2.01
NME3-203ENST00000563367 B3GALT1Q9Y5Z6 326 aa27.59■■■□□ 2.01
NME3-203ENST00000563367 SAR1BQ9Y6B6 198 aa27.59■■■□□ 2.01
NME3-203ENST00000563367 COLEC10Q9Y6Z7 277 aa27.59■■■□□ 2.01
NME3-203ENST00000563367 VAPBO95292 243 aa27.58■■■□□ 2.01
NME3-203ENST00000563367 MLNP12872 115 aa27.58■■■□□ 2.01
NME3-203ENST00000563367 PTGIRP43119 386 aa27.58■■■□□ 2.01
NME3-203ENST00000563367 CD151P48509 253 aa27.58■■■□□ 2.01
NME3-203ENST00000563367 PPP1R7Q15435 360 aa27.58■■■□□ 2.01
NME3-203ENST00000563367 AARS2Q5JTZ9 985 aaKnown RBP27.58■■■□□ 2.01
NME3-203ENST00000563367 TMEM164Q5U3C3 297 aa27.58■■■□□ 2.01
NME3-203ENST00000563367 IRGCQ6NXR0 463 aa27.58■■■□□ 2.01
NME3-203ENST00000563367 FAM92BQ6ZTR7 304 aa27.58■■■□□ 2.01
NME3-203ENST00000563367 PDZD3Q86UT5 571 aa27.58■■■□□ 2.01
NME3-203ENST00000563367 C17orf53Q8N3J3 647 aaPredicted RBP27.58■■■□□ 2.01
NME3-203ENST00000563367 SERPINB12Q96P63 405 aa27.58■■■□□ 2.01
NME3-203ENST00000563367 FERD3LQ96RJ6 166 aa27.58■■■□□ 2.01
NME3-203ENST00000563367 PCYOX1Q9UHG3 505 aa27.58■■■□□ 2.01
NME3-203ENST00000563367 HEBP2Q9Y5Z4 205 aa27.58■■■□□ 2.01
NME3-203ENST00000563367 CTAGE9A4FU28 777 aa27.57■■■□□ 2
NME3-203ENST00000563367 LIN7AO14910 233 aaPredicted RBP27.57■■■□□ 2
NME3-203ENST00000563367 ITGB6P18564 788 aa27.57■■■□□ 2
NME3-203ENST00000563367 SEPHS1P49903 392 aa27.57■■■□□ 2
NME3-203ENST00000563367 MC2RQ01718 297 aa27.57■■■□□ 2
NME3-203ENST00000563367 KRT33BQ14525 404 aa27.57■■■□□ 2
NME3-203ENST00000563367 ANKS6Q68DC2 871 aa27.57■■■□□ 2
NME3-203ENST00000563367 AGGF1Q8N302 714 aaeCLIP27.57■■■□□ 2
NME3-203ENST00000563367 LKAAEAR1Q8TD35 194 aa27.57■■■□□ 2
NME3-203ENST00000563367 SLCO2A1Q92959 643 aa27.57■■■□□ 2
NME3-203ENST00000563367 ZDHHC12Q96GR4 267 aa27.57■■■□□ 2
NME3-203ENST00000563367 NRTNQ99748 197 aa27.57■■■□□ 2
NME3-203ENST00000563367 DDA1Q9BW61 102 aa27.57■■■□□ 2
NME3-203ENST00000563367 PRORYQ9H606 182 aa27.57■■■□□ 2
NME3-203ENST00000563367 XAB2Q9HCS7 855 aaKnown RBP27.57■■■□□ 2
NME3-203ENST00000563367 SLC5A10A0PJK1 596 aa27.56■■■□□ 2
NME3-203ENST00000563367 IQCF5A8MTL0 148 aa27.56■■■□□ 2
NME3-203ENST00000563367 GOLGA8KD6RF30 607 aa27.56■■■□□ 2
NME3-203ENST00000563367 GOLGA8TH3BQL2 631 aa27.56■■■□□ 2
NME3-203ENST00000563367 IFRD1O00458 451 aaPredicted RBP27.56■■■□□ 2
NME3-203ENST00000563367 PPARGP37231 505 aaPredicted RBP27.56■■■□□ 2
NME3-203ENST00000563367 TTPAP49638 278 aa27.56■■■□□ 2
NME3-203ENST00000563367 CACHD1Q5VU97 1274 aa27.56■■■□□ 2
NME3-203ENST00000563367 CASC4Q6P4E1 433 aa27.56■■■□□ 2
NME3-203ENST00000563367 ZNF449Q6P9G9 518 aa27.56■■■□□ 2
NME3-203ENST00000563367 PRSS42Q7Z5A4 293 aa27.56■■■□□ 2
NME3-203ENST00000563367 TFGQ92734 400 aaPredicted RBP27.56■■■□□ 2
NME3-203ENST00000563367 FCRL3Q96P31 734 aaPredicted RBP27.56■■■□□ 2
NME3-203ENST00000563367 CTRCQ99895 268 aa27.56■■■□□ 2
NME3-203ENST00000563367 ZNF768Q9H5H4 540 aaKnown RBP27.56■■■□□ 2
NME3-203ENST00000563367 SIDT1Q9NXL6 827 aaKnown RBP27.56■■■□□ 2
NME3-203ENST00000563367 EIF2AK3Q9NZJ5 1116 aaKnown RBP27.56■■■□□ 2
NME3-203ENST00000563367 OR5K3A6NET4 321 aa27.55■■■□□ 2
NME3-203ENST00000563367 SDR42E2A6NKP2 422 aa27.55■■■□□ 2
NME3-203ENST00000563367 BHMG1C9JSJ3 638 aaPredicted RBP27.55■■■□□ 2
NME3-203ENST00000563367 TOX3O15405 576 aaPredicted RBP27.55■■■□□ 2
NME3-203ENST00000563367 RASSF9O75901 435 aa27.55■■■□□ 2
NME3-203ENST00000563367 LIPCP11150 499 aa27.55■■■□□ 2
NME3-203ENST00000563367 NDUFS1P28331 727 aa27.55■■■□□ 2
NME3-203ENST00000563367 CCR7P32248 378 aa27.55■■■□□ 2
NME3-203ENST00000563367 MAGEA3P43357 314 aa27.55■■■□□ 2
NME3-203ENST00000563367 ARCN1P48444 511 aaKnown RBP27.55■■■□□ 2
NME3-203ENST00000563367 PTK6Q13882 451 aa27.55■■■□□ 2
NME3-203ENST00000563367 BOP1Q14137 746 aaKnown RBP27.55■■■□□ 2
NME3-203ENST00000563367 RNASEH2BQ5TBB1 312 aaKnown RBP27.55■■■□□ 2
NME3-203ENST00000563367 BROXQ5VW32 411 aa27.55■■■□□ 2
NME3-203ENST00000563367 KLHL35Q6PF15 583 aa27.55■■■□□ 2
NME3-203ENST00000563367 PPIL6Q8IXY8 311 aa27.55■■■□□ 2
NME3-203ENST00000563367 ACVR1CQ8NER5 493 aa27.55■■■□□ 2
NME3-203ENST00000563367 OR4E2Q8NGC2 313 aa27.55■■■□□ 2
NME3-203ENST00000563367 P2RY12Q9H244 342 aa27.55■■■□□ 2
NME3-203ENST00000563367 CPNE5Q9HCH3 593 aa27.55■■■□□ 2
NME3-203ENST00000563367 APMAPQ9HDC9 416 aa27.55■■■□□ 2
NME3-203ENST00000563367 FBXO8Q9NRD0 319 aa27.55■■■□□ 2
NME3-203ENST00000563367 KCND1Q9NSA2 647 aa27.55■■■□□ 2
NME3-203ENST00000563367 HRASLS2Q9NWW9 162 aa27.55■■■□□ 2
NME3-203ENST00000563367 OR6C74A6NCV1 312 aa27.54■■■□□ 2
NME3-203ENST00000563367 PRMT5O14744 637 aaPredicted RBP27.54■■■□□ 2
NME3-203ENST00000563367 ACADLP28330 430 aa27.54■■■□□ 2
NME3-203ENST00000563367 CSE1LP55060 971 aaKnown RBP27.54■■■□□ 2
NME3-203ENST00000563367 DCAF12Q5T6F0 453 aa27.54■■■□□ 2
NME3-203ENST00000563367 ARMC3Q5W041 872 aa27.54■■■□□ 2
NME3-203ENST00000563367 KIAA0930Q6ICG6 404 aaPredicted RBP27.54■■■□□ 2
NME3-203ENST00000563367 DTX1Q86Y01 620 aa27.54■■■□□ 2
NME3-203ENST00000563367 MGAQ8IWI9 3026 aa27.54■■■□□ 2
NME3-203ENST00000563367 KLHL7Q8IXQ5 586 aa27.54■■■□□ 2
NME3-203ENST00000563367 KRT222Q8N1A0 295 aa27.54■■■□□ 2
NME3-203ENST00000563367 KLHL6Q8WZ60 621 aa27.54■■■□□ 2
NME3-203ENST00000563367 CARD6Q9BX69 1037 aa27.54■■■□□ 2
NME3-203ENST00000563367 ASIC3Q9UHC3 531 aa27.54■■■□□ 2
NME3-203ENST00000563367 FAM237BA0A1B0GVD1 139 aa27.53■■■□□ 2
NME3-203ENST00000563367 IQCJ-SCHIP1C9J366 451 aaPredicted RBP27.53■■■□□ 2
NME3-203ENST00000563367 CD82P27701 267 aa27.53■■■□□ 2
NME3-203ENST00000563367 RAB15P59190 212 aa27.53■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms