RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, human

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRC28-222	ENST00000561431	C10orf53	Q8N6V4	93 aa		4.11	□□□□□ -1.75
LRRC28-222	ENST00000561431	C11orf65	Q8NCR3	313 aa		4.11	□□□□□ -1.75
LRRC28-222	ENST00000561431	OR6C4	Q8NGE1	309 aa		4.11	□□□□□ -1.75
LRRC28-222	ENST00000561431	KLHL29	Q96CT2	875 aa		4.11	□□□□□ -1.75
LRRC28-222	ENST00000561431	KLHL15	Q96M94	604 aa		4.11	□□□□□ -1.75
LRRC28-222	ENST00000561431	AK8	Q96MA6	479 aa		4.11	□□□□□ -1.75
LRRC28-222	ENST00000561431	SPX	Q9BT56	116 aa		4.11	□□□□□ -1.75
LRRC28-222	ENST00000561431	NUF2	Q9BZD4	464 aa		4.11	□□□□□ -1.75
LRRC28-222	ENST00000561431	STMN4	Q9H169	189 aa	Predicted RBP	4.11	□□□□□ -1.75
LRRC28-222	ENST00000561431	PORCN	Q9H237	461 aa		4.11	□□□□□ -1.75
LRRC28-222	ENST00000561431	PNRC2	Q9NPJ4	139 aa	Known RBP	4.11	□□□□□ -1.75
LRRC28-222	ENST00000561431	SEMA4B	Q9NPR2	832 aa	Predicted RBP	4.11	□□□□□ -1.75
LRRC28-222	ENST00000561431	PCDHB16	Q9NRJ7	776 aa		4.11	□□□□□ -1.75
LRRC28-222	ENST00000561431	SNTG1	Q9NSN8	517 aa		4.11	□□□□□ -1.75
LRRC28-222	ENST00000561431	DDX18	Q9NVP1	670 aa	Known RBP	4.11	□□□□□ -1.75
LRRC28-222	ENST00000561431	ZDHHC7	Q9NXF8	308 aa		4.11	□□□□□ -1.75
LRRC28-222	ENST00000561431	MSRB1	Q9NZV6	116 aa		4.11	□□□□□ -1.75
LRRC28-222	ENST00000561431	MPP6	Q9NZW5	540 aa		4.11	□□□□□ -1.75
LRRC28-222	ENST00000561431	ACTR3B	Q9P1U1	418 aa		4.11	□□□□□ -1.75
LRRC28-222	ENST00000561431	CTNNAL1	Q9UBT7	734 aa		4.11	□□□□□ -1.75
LRRC28-222	ENST00000561431	TEKT2	Q9UIF3	430 aa		4.11	□□□□□ -1.75
LRRC28-222	ENST00000561431	SARDH	Q9UL12	918 aa		4.11	□□□□□ -1.75
LRRC28-222	ENST00000561431	PCDHGB4	Q9UN71	923 aa		4.11	□□□□□ -1.75
LRRC28-222	ENST00000561431	NAALADL1	Q9UQQ1	740 aa		4.11	□□□□□ -1.75
LRRC28-222	ENST00000561431	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	4.11	□□□□□ -1.75
LRRC28-222	ENST00000561431	SESN1	Q9Y6P5	492 aa		4.11	□□□□□ -1.75
LRRC28-222	ENST00000561431	BRCA2	P51587	3418 aa		4.11	□□□□□ -1.75
LRRC28-222	ENST00000561431	ZMYM6	O95789	1325 aa		4.11	□□□□□ -1.75
LRRC28-222	ENST00000561431		A0A0A0MQY5	61 aa		4.1	□□□□□ -1.75
LRRC28-222	ENST00000561431	TRBV5-3	A0A0A0MS03	114 aa		4.1	□□□□□ -1.75
LRRC28-222	ENST00000561431	AGAP14	A8MT82	685 aa		4.1	□□□□□ -1.75
LRRC28-222	ENST00000561431	FAM157A	C9JC47	383 aa		4.1	□□□□□ -1.75
LRRC28-222	ENST00000561431		E5RJQ4	531 aa		4.1	□□□□□ -1.75
LRRC28-222	ENST00000561431		L7N2F9	121 aa		4.1	□□□□□ -1.75
LRRC28-222	ENST00000561431	SH2B2	O14492	632 aa	Predicted RBP	4.1	□□□□□ -1.75
LRRC28-222	ENST00000561431	AP3D1	O14617	1153 aa		4.1	□□□□□ -1.75
LRRC28-222	ENST00000561431	KIN	O60870	393 aa	Known RBP	4.1	□□□□□ -1.75
LRRC28-222	ENST00000561431	TACC1	O75410	805 aa		4.1	□□□□□ -1.75
LRRC28-222	ENST00000561431	PRDM1	O75626	825 aa		4.1	□□□□□ -1.75
LRRC28-222	ENST00000561431	CSPG5	O95196	566 aa		4.1	□□□□□ -1.75
LRRC28-222	ENST00000561431	YEATS4	O95619	227 aa		4.1	□□□□□ -1.75
LRRC28-222	ENST00000561431	ADCY5	O95622	1261 aa		4.1	□□□□□ -1.75
LRRC28-222	ENST00000561431	SYF2	O95926	243 aa	Known RBP	4.1	□□□□□ -1.75
LRRC28-222	ENST00000561431	TFPI	P10646	304 aa		4.1	□□□□□ -1.75
LRRC28-222	ENST00000561431	IRF1	P10914	325 aa		4.1	□□□□□ -1.75
LRRC28-222	ENST00000561431	PDHB	P11177	359 aa		4.1	□□□□□ -1.75
LRRC28-222	ENST00000561431	CHRNB1	P11230	501 aa		4.1	□□□□□ -1.75
LRRC28-222	ENST00000561431	CDK4	P11802	303 aa		4.1	□□□□□ -1.75
LRRC28-222	ENST00000561431	PDGFRA	P16234	1089 aa		4.1	□□□□□ -1.75
LRRC28-222	ENST00000561431	PSMA4	P25789	261 aa	Known RBP	4.1	□□□□□ -1.75
LRRC28-222	ENST00000561431	MLH1	P40692	756 aa		4.1	□□□□□ -1.75
LRRC28-222	ENST00000561431	HNMT	P50135	292 aa		4.1	□□□□□ -1.75
LRRC28-222	ENST00000561431	EIF3B	P55884	814 aa	Known RBP	4.1	□□□□□ -1.75
LRRC28-222	ENST00000561431	YBEY	P58557	167 aa	Predicted RBP	4.1	□□□□□ -1.75
LRRC28-222	ENST00000561431	BEX3	Q00994	111 aa		4.1	□□□□□ -1.75
LRRC28-222	ENST00000561431	STK4	Q13043	487 aa		4.1	□□□□□ -1.75
LRRC28-222	ENST00000561431	TRDN	Q13061	729 aa		4.1	□□□□□ -1.75
LRRC28-222	ENST00000561431	IK	Q13123	557 aa	Predicted RBP	4.1	□□□□□ -1.75
LRRC28-222	ENST00000561431	MAMLD1	Q13495	774 aa		4.1	□□□□□ -1.75
LRRC28-222	ENST00000561431	ARHGEF6	Q15052	776 aa		4.1	□□□□□ -1.75
LRRC28-222	ENST00000561431	DUSP28	Q4G0W2	176 aa		4.1	□□□□□ -1.75
LRRC28-222	ENST00000561431	CCDC40	Q4G0X9	1142 aa		4.1	□□□□□ -1.75
LRRC28-222	ENST00000561431	TCP11X2	Q5H9J9	407 aa		4.1	□□□□□ -1.75
LRRC28-222	ENST00000561431	KCNT1	Q5JUK3	1230 aa		4.1	□□□□□ -1.75
LRRC28-222	ENST00000561431	DNTTIP2	Q5QJE6	756 aa	Known RBP	4.1	□□□□□ -1.75
LRRC28-222	ENST00000561431	PIK3CD-AS1	Q5SR53	167 aa		4.1	□□□□□ -1.75
LRRC28-222	ENST00000561431	SERTAD4-AS1	Q5TG53	156 aa		4.1	□□□□□ -1.75
LRRC28-222	ENST00000561431	MORN5	Q5VZ52	161 aa		4.1	□□□□□ -1.75
LRRC28-222	ENST00000561431	SHQ1	Q6PI26	577 aa	Known RBP	4.1	□□□□□ -1.75
LRRC28-222	ENST00000561431	PACS1	Q6VY07	963 aa		4.1	□□□□□ -1.75
LRRC28-222	ENST00000561431	RGS9BP	Q6ZS82	235 aa		4.1	□□□□□ -1.75
LRRC28-222	ENST00000561431	IKBIP	Q70UQ0	350 aa		4.1	□□□□□ -1.75
LRRC28-222	ENST00000561431	TRAPPC11	Q7Z392	1133 aa		4.1	□□□□□ -1.75
LRRC28-222	ENST00000561431	SERPINA11	Q86U17	422 aa		4.1	□□□□□ -1.75
LRRC28-222	ENST00000561431	TMC8	Q8IU68	726 aa		4.1	□□□□□ -1.75
LRRC28-222	ENST00000561431	THNSL1	Q8IYQ7	743 aa		4.1	□□□□□ -1.75
LRRC28-222	ENST00000561431	KIAA2013	Q8IYS2	634 aa		4.1	□□□□□ -1.75
LRRC28-222	ENST00000561431	PLD5	Q8N7P1	536 aa		4.1	□□□□□ -1.75
LRRC28-222	ENST00000561431	OR52K1	Q8NGK4	314 aa		4.1	□□□□□ -1.75
LRRC28-222	ENST00000561431	METTL6	Q8TCB7	284 aa		4.1	□□□□□ -1.75
LRRC28-222	ENST00000561431	GRK7	Q8WTQ7	553 aa		4.1	□□□□□ -1.75
LRRC28-222	ENST00000561431	RNF139	Q8WU17	664 aa		4.1	□□□□□ -1.75
LRRC28-222	ENST00000561431	HDAC7	Q8WUI4	952 aa		4.1	□□□□□ -1.75
LRRC28-222	ENST00000561431	TMEM174	Q8WUU8	243 aa		4.1	□□□□□ -1.75
LRRC28-222	ENST00000561431	DEPDC1B	Q8WUY9	529 aa		4.1	□□□□□ -1.75
LRRC28-222	ENST00000561431	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	4.1	□□□□□ -1.75
LRRC28-222	ENST00000561431	LPAR1	Q92633	364 aa		4.1	□□□□□ -1.75
LRRC28-222	ENST00000561431	SMARCE1	Q969G3	411 aa		4.1	□□□□□ -1.75
LRRC28-222	ENST00000561431	TUBGCP3	Q96CW5	907 aa		4.1	□□□□□ -1.75
LRRC28-222	ENST00000561431	NRBF2	Q96F24	287 aa		4.1	□□□□□ -1.75
LRRC28-222	ENST00000561431	CALML4	Q96GE6	196 aa		4.1	□□□□□ -1.75
LRRC28-222	ENST00000561431	ZC3HAV1L	Q96H79	300 aa	Known RBP	4.1	□□□□□ -1.75
LRRC28-222	ENST00000561431	DHTKD1	Q96HY7	919 aa	Predicted RBP	4.1	□□□□□ -1.75
LRRC28-222	ENST00000561431	EPSTI1	Q96J88	318 aa		4.1	□□□□□ -1.75
LRRC28-222	ENST00000561431	TXN2	Q99757	166 aa		4.1	□□□□□ -1.75
LRRC28-222	ENST00000561431	WDR83	Q9BRX9	315 aa	Known RBP	4.1	□□□□□ -1.75
LRRC28-222	ENST00000561431	TBCD	Q9BTW9	1192 aa		4.1	□□□□□ -1.75
LRRC28-222	ENST00000561431	TRMO	Q9BU70	441 aa		4.1	□□□□□ -1.75
LRRC28-222	ENST00000561431	HEMGN	Q9BXL5	484 aa		4.1	□□□□□ -1.75
LRRC28-222	ENST00000561431	LHPP	Q9H008	270 aa		4.1	□□□□□ -1.75

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