RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 EDN2P20800 178 aa2□□□□□ -2.09
RTF1-207ENST00000561076 PAICSP22234 425 aaKnown RBP2□□□□□ -2.09
RTF1-207ENST00000561076 ACP1P24666 158 aa2□□□□□ -2.09
RTF1-207ENST00000561076 NMBRP28336 390 aa2□□□□□ -2.09
RTF1-207ENST00000561076 APOBEC3AP31941 199 aaPredicted RBP2□□□□□ -2.09
RTF1-207ENST00000561076 OTX2P32243 289 aa2□□□□□ -2.09
RTF1-207ENST00000561076 CBSP35520 551 aa2□□□□□ -2.09
RTF1-207ENST00000561076 CHI3L1P36222 383 aaPredicted RBP2□□□□□ -2.09
RTF1-207ENST00000561076 ARHGAP25P42331 645 aa2□□□□□ -2.09
RTF1-207ENST00000561076 SYKP43405 635 aa2□□□□□ -2.09
RTF1-207ENST00000561076 IER3P46695 156 aa2□□□□□ -2.09
RTF1-207ENST00000561076 RAP1GAPP47736 663 aa2□□□□□ -2.09
RTF1-207ENST00000561076 CD151P48509 253 aa2□□□□□ -2.09
RTF1-207ENST00000561076 CD97P48960 835 aa2□□□□□ -2.09
RTF1-207ENST00000561076 DHPSP49366 369 aaPredicted RBP2□□□□□ -2.09
RTF1-207ENST00000561076 RGS7P49802 495 aa2□□□□□ -2.09
RTF1-207ENST00000561076 VAV2P52735 878 aa2□□□□□ -2.09
RTF1-207ENST00000561076 NAPAP54920 295 aa2□□□□□ -2.09
RTF1-207ENST00000561076 MTCP1P56278 107 aa2□□□□□ -2.09
RTF1-207ENST00000561076 P2RX3P56373 397 aa2□□□□□ -2.09
RTF1-207ENST00000561076 CLDN2P57739 230 aa2□□□□□ -2.09
RTF1-207ENST00000561076 EEFSECP57772 596 aaKnown RBP2□□□□□ -2.09
RTF1-207ENST00000561076 CXADRP78310 365 aa2□□□□□ -2.09
RTF1-207ENST00000561076 GPC5P78333 572 aa2□□□□□ -2.09
RTF1-207ENST00000561076 CDK3Q00526 305 aa2□□□□□ -2.09
RTF1-207ENST00000561076 PMP22Q01453 160 aa2□□□□□ -2.09
RTF1-207ENST00000561076 GCNT1Q02742 428 aa2□□□□□ -2.09
RTF1-207ENST00000561076 MAP2K1Q02750 393 aaPredicted RBP2□□□□□ -2.09
RTF1-207ENST00000561076 CFHR3Q02985 330 aa2□□□□□ -2.09
RTF1-207ENST00000561076 HSF2Q03933 536 aa2□□□□□ -2.09
RTF1-207ENST00000561076 OCA2Q04671 838 aa2□□□□□ -2.09
RTF1-207ENST00000561076 HGFACQ04756 655 aa2□□□□□ -2.09
RTF1-207ENST00000561076 GAD2Q05329 585 aa2□□□□□ -2.09
RTF1-207ENST00000561076 PRKCZQ05513 592 aa2□□□□□ -2.09
RTF1-207ENST00000561076 GRIK3Q13003 919 aa2□□□□□ -2.09
RTF1-207ENST00000561076 KLF10Q13118 480 aa2□□□□□ -2.09
RTF1-207ENST00000561076 CRHR2Q13324 411 aa2□□□□□ -2.09
RTF1-207ENST00000561076 TP53BP2Q13625 1128 aa2□□□□□ -2.09
RTF1-207ENST00000561076 PDE7AQ13946 482 aa2□□□□□ -2.09
RTF1-207ENST00000561076 IL18Q14116 193 aa2□□□□□ -2.09
RTF1-207ENST00000561076 BTG3Q14201 252 aaPredicted RBP2□□□□□ -2.09
RTF1-207ENST00000561076 PDK3Q15120 406 aa2□□□□□ -2.09
RTF1-207ENST00000561076 STK11Q15831 433 aa2□□□□□ -2.09
RTF1-207ENST00000561076 HSPB2Q16082 182 aa2□□□□□ -2.09
RTF1-207ENST00000561076 PKN1Q16512 942 aa2□□□□□ -2.09
RTF1-207ENST00000561076 KCNMB1Q16558 191 aa2□□□□□ -2.09
RTF1-207ENST00000561076 RNF151Q2KHN1 245 aa2□□□□□ -2.09
RTF1-207ENST00000561076 SHROOM1Q2M3G4 852 aaPredicted RBP2□□□□□ -2.09
RTF1-207ENST00000561076 FAM174BQ3ZCQ3 159 aa2□□□□□ -2.09
RTF1-207ENST00000561076 MCMDC2Q4G0Z9 681 aa2□□□□□ -2.09
RTF1-207ENST00000561076 SOWAHCQ53LP3 525 aaPredicted RBP2□□□□□ -2.09
RTF1-207ENST00000561076 TMEM41BQ5BJD5 291 aa2□□□□□ -2.09
RTF1-207ENST00000561076 RABL3Q5HYI8 236 aa2□□□□□ -2.09
RTF1-207ENST00000561076 PRAMEF19Q5SWL8 479 aa2□□□□□ -2.09
RTF1-207ENST00000561076 C9orf50Q5SZB4 431 aa2□□□□□ -2.09
RTF1-207ENST00000561076 GCNT6Q5T4J0 391 aa2□□□□□ -2.09
RTF1-207ENST00000561076 STRIP1Q5VSL9 837 aa2□□□□□ -2.09
RTF1-207ENST00000561076 ANXA8L1Q5VT79 327 aa2□□□□□ -2.09
RTF1-207ENST00000561076 PRAMEF20Q5VT98 475 aa2□□□□□ -2.09
RTF1-207ENST00000561076 AADACL4Q5VUY2 407 aa2□□□□□ -2.09
RTF1-207ENST00000561076 DCAF12L2Q5VW00 463 aa2□□□□□ -2.09
RTF1-207ENST00000561076 GGNBP1Q5YKI7 109 aa2□□□□□ -2.09
RTF1-207ENST00000561076 KCTD11Q693B1 232 aa2□□□□□ -2.09
RTF1-207ENST00000561076 SP5Q6BEB4 398 aaPredicted RBP2□□□□□ -2.09
RTF1-207ENST00000561076 TTC19Q6DKK2 380 aaPredicted RBP2□□□□□ -2.09
RTF1-207ENST00000561076 TXNRD3NBQ6F5E7 133 aa2□□□□□ -2.09
RTF1-207ENST00000561076 MFSD12Q6NUT3 480 aa2□□□□□ -2.09
RTF1-207ENST00000561076 ARMC6Q6NXE6 501 aa2□□□□□ -2.09
RTF1-207ENST00000561076 NOTUMQ6P988 496 aa2□□□□□ -2.09
RTF1-207ENST00000561076 TEX38Q6PEX7 206 aa2□□□□□ -2.09
RTF1-207ENST00000561076 PODNL1Q6PEZ8 512 aa2□□□□□ -2.09
RTF1-207ENST00000561076 KCNV1Q6PIU1 500 aa2□□□□□ -2.09
RTF1-207ENST00000561076 FBXO46Q6PJ61 603 aaPredicted RBP2□□□□□ -2.09
RTF1-207ENST00000561076 LRIG3Q6UXM1 1119 aa2□□□□□ -2.09
RTF1-207ENST00000561076 ANO5Q75V66 913 aa2□□□□□ -2.09
RTF1-207ENST00000561076 DPPA4Q7L190 304 aa2□□□□□ -2.09
RTF1-207ENST00000561076 CENPQQ7L2Z9 268 aaPredicted RBP2□□□□□ -2.09
RTF1-207ENST00000561076 EFL1Q7Z2Z2 1120 aaKnown RBP2□□□□□ -2.09
RTF1-207ENST00000561076 SPRED2Q7Z698 418 aa2□□□□□ -2.09
RTF1-207ENST00000561076 TMCO2Q7Z6W1 182 aaPredicted RBP2□□□□□ -2.09
RTF1-207ENST00000561076 TAX1BP1Q86VP1 789 aa2□□□□□ -2.09
RTF1-207ENST00000561076 SGMS1Q86VZ5 419 aa2□□□□□ -2.09
RTF1-207ENST00000561076 AMZ2Q86W34 360 aa2□□□□□ -2.09
RTF1-207ENST00000561076 ANKRD46Q86W74 232 aa2□□□□□ -2.09
RTF1-207ENST00000561076 DTX1Q86Y01 620 aa2□□□□□ -2.09
RTF1-207ENST00000561076 ZDHHC13Q8IUH4 622 aa2□□□□□ -2.09
RTF1-207ENST00000561076 SLC22A9Q8IVM8 553 aa2□□□□□ -2.09
RTF1-207ENST00000561076 SFTPA1Q8IWL2 248 aa2□□□□□ -2.09
RTF1-207ENST00000561076 DNAJC10Q8IXB1 793 aa2□□□□□ -2.09
RTF1-207ENST00000561076 KBTBD2Q8IY47 623 aa2□□□□□ -2.09
RTF1-207ENST00000561076 SRRM1Q8IYB3 904 aaKnown RBP2□□□□□ -2.09
RTF1-207ENST00000561076 KLHDC8AQ8IYD2 350 aa2□□□□□ -2.09
RTF1-207ENST00000561076 ZNF679Q8IYX0 411 aa2□□□□□ -2.09
RTF1-207ENST00000561076 ADGRF3Q8IZF5 1079 aa2□□□□□ -2.09
RTF1-207ENST00000561076 DSELQ8IZU8 1212 aa2□□□□□ -2.09
RTF1-207ENST00000561076 ARFGAP2Q8N6H7 521 aa2□□□□□ -2.09
RTF1-207ENST00000561076 TMEM217Q8N7C4 229 aa2□□□□□ -2.09
RTF1-207ENST00000561076 LINC00482Q8N8I6 264 aa2□□□□□ -2.09
RTF1-207ENST00000561076 CCDC63Q8NA47 563 aa2□□□□□ -2.09
RTF1-207ENST00000561076 DRAXINQ8NBI3 349 aaPredicted RBP2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms