RNA–Protein interactions for RNA: ENST00000560628.1

LDLR-214, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-214ENST00000560628 GPR33Q49SQ1 333 aa9.96□□□□□ -0.82
LDLR-214ENST00000560628 COLEC12Q5KU26 742 aa9.96□□□□□ -0.82
LDLR-214ENST00000560628 FAM199XQ6PEV8 388 aaPredicted RBP9.96□□□□□ -0.82
LDLR-214ENST00000560628 KLHDC8BQ8IXV7 354 aa9.96□□□□□ -0.82
LDLR-214ENST00000560628 SYCE1Q8N0S2 351 aa9.96□□□□□ -0.82
LDLR-214ENST00000560628 CLDN19Q8N6F1 224 aa9.96□□□□□ -0.82
LDLR-214ENST00000560628 SLC35B2Q8TB61 432 aa9.96□□□□□ -0.82
LDLR-214ENST00000560628 HM13Q8TCT9 377 aa9.96□□□□□ -0.82
LDLR-214ENST00000560628 CT55Q8WUE5 264 aa9.96□□□□□ -0.82
LDLR-214ENST00000560628 HEXDCQ8WVB3 486 aa9.96□□□□□ -0.82
LDLR-214ENST00000560628 ZFPM2Q8WW38 1151 aa9.96□□□□□ -0.82
LDLR-214ENST00000560628 LCN9Q8WX39 176 aa9.96□□□□□ -0.82
LDLR-214ENST00000560628 ATG4AQ8WYN0 398 aa9.96□□□□□ -0.82
LDLR-214ENST00000560628 ABHD17AQ96GS6 310 aa9.96□□□□□ -0.82
LDLR-214ENST00000560628 CDKN2AIPNLQ96HQ2 116 aa9.96□□□□□ -0.82
LDLR-214ENST00000560628 RUFY1Q96T51 708 aa9.96□□□□□ -0.82
LDLR-214ENST00000560628 CD180Q99467 661 aa9.96□□□□□ -0.82
LDLR-214ENST00000560628 CCM2Q9BSQ5 444 aa9.96□□□□□ -0.82
LDLR-214ENST00000560628 LRRC40Q9H9A6 602 aa9.96□□□□□ -0.82
LDLR-214ENST00000560628 LHX9Q9NQ69 397 aa9.96□□□□□ -0.82
LDLR-214ENST00000560628 FGF21Q9NSA1 209 aa9.96□□□□□ -0.82
LDLR-214ENST00000560628 NLE1Q9NVX2 485 aaPredicted RBP9.96□□□□□ -0.82
LDLR-214ENST00000560628 FEZ2Q9UHY8 353 aaPredicted RBP9.96□□□□□ -0.82
LDLR-214ENST00000560628 C17orf113A0A1B0GUU1 675 aa9.95□□□□□ -0.82
LDLR-214ENST00000560628 GSAPA4D1B5 854 aa9.95□□□□□ -0.82
LDLR-214ENST00000560628 CDC14CA4D256 554 aa9.95□□□□□ -0.82
LDLR-214ENST00000560628 KLHL33A6NCF5 533 aa9.95□□□□□ -0.82
LDLR-214ENST00000560628 OR51F1A6NGY5 319 aa9.95□□□□□ -0.82
LDLR-214ENST00000560628 SLC9B1P1A6NJY1 282 aa9.95□□□□□ -0.82
LDLR-214ENST00000560628 MIF4GDA9UHW6 222 aaKnown RBP9.95□□□□□ -0.82
LDLR-214ENST00000560628 TERTO14746 1132 aaKnown RBP9.95□□□□□ -0.82
LDLR-214ENST00000560628 PSMD3O43242 534 aa9.95□□□□□ -0.82
LDLR-214ENST00000560628 ZBTB11O95625 1053 aaPredicted RBP9.95□□□□□ -0.82
LDLR-214ENST00000560628 ACRV1P26436 265 aa9.95□□□□□ -0.82
LDLR-214ENST00000560628 NDUFS1P28331 727 aa9.95□□□□□ -0.82
LDLR-214ENST00000560628 PREPP48147 710 aa9.95□□□□□ -0.82
LDLR-214ENST00000560628 CSRP3P50461 194 aa9.95□□□□□ -0.82
LDLR-214ENST00000560628 PRKAA1Q13131 559 aa9.95□□□□□ -0.82
LDLR-214ENST00000560628 PRKG2Q13237 762 aa9.95□□□□□ -0.82
LDLR-214ENST00000560628 BRD3Q15059 726 aa9.95□□□□□ -0.82
LDLR-214ENST00000560628 DBN1Q16643 649 aa9.95□□□□□ -0.82
LDLR-214ENST00000560628 CCDC38Q502W7 563 aa9.95□□□□□ -0.82
LDLR-214ENST00000560628 PRAMEF17Q5VTA0 474 aa9.95□□□□□ -0.82
LDLR-214ENST00000560628 KMT5CQ86Y97 462 aa9.95□□□□□ -0.82
LDLR-214ENST00000560628 PIANPQ8IYJ0 282 aa9.95□□□□□ -0.82
LDLR-214ENST00000560628 D2HGDHQ8N465 521 aa9.95□□□□□ -0.82
LDLR-214ENST00000560628 OR52K1Q8NGK4 314 aa9.95□□□□□ -0.82
LDLR-214ENST00000560628 C9orf43Q8TAL5 461 aaPredicted RBP9.95□□□□□ -0.82
LDLR-214ENST00000560628 STYXQ8WUJ0 223 aa9.95□□□□□ -0.82
LDLR-214ENST00000560628 ALS2CR12Q96Q35 445 aa9.95□□□□□ -0.82
LDLR-214ENST00000560628 TWSG1Q9GZX9 223 aa9.95□□□□□ -0.82
LDLR-214ENST00000560628 OR52A5Q9H2C5 316 aa9.95□□□□□ -0.82
LDLR-214ENST00000560628 SRMSQ9H3Y6 488 aa9.95□□□□□ -0.82
LDLR-214ENST00000560628 XKR8Q9H6D3 395 aa9.95□□□□□ -0.82
LDLR-214ENST00000560628 COG4Q9H9E3 785 aa9.95□□□□□ -0.82
LDLR-214ENST00000560628 KCND1Q9NSA2 647 aa9.95□□□□□ -0.82
LDLR-214ENST00000560628 SOHLH2Q9NX45 425 aa9.95□□□□□ -0.82
LDLR-214ENST00000560628 SMARCAL1Q9NZC9 954 aa9.95□□□□□ -0.82
LDLR-214ENST00000560628 TUBD1Q9UJT1 453 aa9.95□□□□□ -0.82
LDLR-214ENST00000560628 KCND3Q9UK17 655 aa9.95□□□□□ -0.82
LDLR-214ENST00000560628 HEBP2Q9Y5Z4 205 aa9.95□□□□□ -0.82
LDLR-214ENST00000560628 CAPN6Q9Y6Q1 641 aa9.95□□□□□ -0.82
LDLR-214ENST00000560628 IGLV3-16A0A075B6K0 115 aa9.94□□□□□ -0.82
LDLR-214ENST00000560628 TRBV5-4A0A0C4DH59 114 aa9.94□□□□□ -0.82
LDLR-214ENST00000560628 GOLGA6L3A6NEY3 463 aa9.94□□□□□ -0.82
LDLR-214ENST00000560628 K7EM74 188 aa9.94□□□□□ -0.82
LDLR-214ENST00000560628 IFRD1O00458 451 aaPredicted RBP9.94□□□□□ -0.82
LDLR-214ENST00000560628 BTN3A3O00478 584 aa9.94□□□□□ -0.82
LDLR-214ENST00000560628 CREG1O75629 220 aa9.94□□□□□ -0.82
LDLR-214ENST00000560628 ZNF189O75820 626 aaPredicted RBP9.94□□□□□ -0.82
LDLR-214ENST00000560628 AP2A1O95782 977 aa9.94□□□□□ -0.82
LDLR-214ENST00000560628 MT-ND3P03897 115 aa9.94□□□□□ -0.82
LDLR-214ENST00000560628 ETS1P14921 441 aa9.94□□□□□ -0.82
LDLR-214ENST00000560628 NR1D1P20393 614 aa9.94□□□□□ -0.82
LDLR-214ENST00000560628 CDH3P22223 829 aa9.94□□□□□ -0.82
LDLR-214ENST00000560628 RPS18P62269 152 aaKnown RBP9.94□□□□□ -0.82
LDLR-214ENST00000560628 TUBB4BP68371 445 aa9.94□□□□□ -0.82
LDLR-214ENST00000560628 TLE1Q04724 770 aa9.94□□□□□ -0.82
LDLR-214ENST00000560628 CACNG1Q06432 222 aa9.94□□□□□ -0.82
LDLR-214ENST00000560628 SNX1Q13596 522 aa9.94□□□□□ -0.82
LDLR-214ENST00000560628 TUBB2AQ13885 445 aa9.94□□□□□ -0.82
LDLR-214ENST00000560628 P3H1Q32P28 736 aa9.94□□□□□ -0.82
LDLR-214ENST00000560628 ZNF658BQ4V348 819 aaPredicted RBP9.94□□□□□ -0.82
LDLR-214ENST00000560628 TMTC4Q5T4D3 741 aa9.94□□□□□ -0.82
LDLR-214ENST00000560628 CYB5D1Q6P9G0 228 aa9.94□□□□□ -0.82
LDLR-214ENST00000560628 ZNF449Q6P9G9 518 aa9.94□□□□□ -0.82
LDLR-214ENST00000560628 NAPRTQ6XQN6 538 aa9.94□□□□□ -0.82
LDLR-214ENST00000560628 PRUNE1Q86TP1 453 aa9.94□□□□□ -0.82
LDLR-214ENST00000560628 BPHLQ86WA6 291 aaPredicted RBP9.94□□□□□ -0.82
LDLR-214ENST00000560628 TMEM126BQ8IUX1 230 aa9.94□□□□□ -0.82
LDLR-214ENST00000560628 TXLNBQ8N3L3 684 aa9.94□□□□□ -0.82
LDLR-214ENST00000560628 DNAAF3Q8N9W5 541 aa9.94□□□□□ -0.82
LDLR-214ENST00000560628 ACVR1CQ8NER5 493 aa9.94□□□□□ -0.82
LDLR-214ENST00000560628 C1orf54Q8WWF1 131 aa9.94□□□□□ -0.82
LDLR-214ENST00000560628 TFGQ92734 400 aaPredicted RBP9.94□□□□□ -0.82
LDLR-214ENST00000560628 MR1Q95460 341 aa9.94□□□□□ -0.82
LDLR-214ENST00000560628 HES6Q96HZ4 224 aa9.94□□□□□ -0.82
LDLR-214ENST00000560628 FCRL4Q96PJ5 515 aa9.94□□□□□ -0.82
LDLR-214ENST00000560628 C19orf43Q9BQ61 176 aa9.94□□□□□ -0.82
LDLR-214ENST00000560628 HGH1Q9BTY7 390 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms