RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 CCDC114Q96M63 670 aa3.58□□□□□ -1.84
SPG11-218ENST00000559754 ZNF583Q96ND8 569 aa3.58□□□□□ -1.84
SPG11-218ENST00000559754 MYCBPQ99417 103 aaPredicted RBP3.58□□□□□ -1.84
SPG11-218ENST00000559754 SYT17Q9BSW7 474 aa3.58□□□□□ -1.84
SPG11-218ENST00000559754 SLC25A23Q9BV35 468 aa3.58□□□□□ -1.84
SPG11-218ENST00000559754 CCDC106Q9BWC9 280 aa3.58□□□□□ -1.84
SPG11-218ENST00000559754 ACAT2Q9BWD1 397 aa3.58□□□□□ -1.84
SPG11-218ENST00000559754 ABCG4Q9H172 646 aa3.58□□□□□ -1.84
SPG11-218ENST00000559754 ST6GALNAC4Q9H4F1 302 aa3.58□□□□□ -1.84
SPG11-218ENST00000559754 PDZD7Q9H5P4 517 aa3.58□□□□□ -1.84
SPG11-218ENST00000559754 DENND2DQ9H6A0 471 aaPredicted RBP3.58□□□□□ -1.84
SPG11-218ENST00000559754 MMP25Q9NPA2 562 aa3.58□□□□□ -1.84
SPG11-218ENST00000559754 TRMT1Q9NXH9 659 aaKnown RBP3.58□□□□□ -1.84
SPG11-218ENST00000559754 DNAJB9Q9UBS3 223 aa3.58□□□□□ -1.84
SPG11-218ENST00000559754 AGTPBP1Q9UPW5 1226 aa3.58□□□□□ -1.84
SPG11-218ENST00000559754 KLHL20Q9Y2M5 609 aa3.58□□□□□ -1.84
SPG11-218ENST00000559754 TRAV34A0A0B4J273 112 aa3.57□□□□□ -1.84
SPG11-218ENST00000559754 HCRTR2O43614 444 aa3.57□□□□□ -1.84
SPG11-218ENST00000559754 MITFO75030 526 aaPredicted RBP3.57□□□□□ -1.84
SPG11-218ENST00000559754 AVILO75366 819 aa3.57□□□□□ -1.84
SPG11-218ENST00000559754 SIX3O95343 332 aaPredicted RBP3.57□□□□□ -1.84
SPG11-218ENST00000559754 FTCDO95954 541 aa3.57□□□□□ -1.84
SPG11-218ENST00000559754 IGHDP01880 384 aa3.57□□□□□ -1.84
SPG11-218ENST00000559754 SRPRAP08240 638 aaKnown RBP3.57□□□□□ -1.84
SPG11-218ENST00000559754 ITGA2P17301 1181 aa3.57□□□□□ -1.84
SPG11-218ENST00000559754 ERCC2P18074 760 aa3.57□□□□□ -1.84
SPG11-218ENST00000559754 CDAP32320 146 aa3.57□□□□□ -1.84
SPG11-218ENST00000559754 FASLGP48023 281 aa3.57□□□□□ -1.84
SPG11-218ENST00000559754 CAMPP49913 170 aa3.57□□□□□ -1.84
SPG11-218ENST00000559754 ATP12AP54707 1039 aa3.57□□□□□ -1.84
SPG11-218ENST00000559754 ERVK11-1P61568 191 aa3.57□□□□□ -1.84
SPG11-218ENST00000559754 SCN1BQ07699 218 aa3.57□□□□□ -1.84
SPG11-218ENST00000559754 FOXM1Q08050 763 aa3.57□□□□□ -1.84
SPG11-218ENST00000559754 GAGE5Q13069 117 aa3.57□□□□□ -1.84
SPG11-218ENST00000559754 GAGE6Q13070 117 aa3.57□□□□□ -1.84
SPG11-218ENST00000559754 IKQ13123 557 aaPredicted RBP3.57□□□□□ -1.84
SPG11-218ENST00000559754 GRAPQ13588 217 aa3.57□□□□□ -1.84
SPG11-218ENST00000559754 GTF2H2Q13888 395 aa3.57□□□□□ -1.84
SPG11-218ENST00000559754 NFE2L1Q14494 772 aa3.57□□□□□ -1.84
SPG11-218ENST00000559754 HYAL4Q2M3T9 481 aa3.57□□□□□ -1.84
SPG11-218ENST00000559754 SMU1Q2TAY7 513 aa3.57□□□□□ -1.84
SPG11-218ENST00000559754 PCGF3Q3KNV8 242 aa3.57□□□□□ -1.84
SPG11-218ENST00000559754 MPP7Q5T2T1 576 aa3.57□□□□□ -1.84
SPG11-218ENST00000559754 FRG2Q64ET8 278 aa3.57□□□□□ -1.84
SPG11-218ENST00000559754 GTF2H2CQ6P1K8 395 aa3.57□□□□□ -1.84
SPG11-218ENST00000559754 SUSD1Q6UWL2 747 aa3.57□□□□□ -1.84
SPG11-218ENST00000559754 RBPMS2Q6ZRY4 209 aaKnown RBP3.57□□□□□ -1.84
SPG11-218ENST00000559754 KCTD8Q6ZWB6 473 aa3.57□□□□□ -1.84
SPG11-218ENST00000559754 LCA5Q86VQ0 697 aa3.57□□□□□ -1.84
SPG11-218ENST00000559754 XXYLT1Q8NBI6 393 aa3.57□□□□□ -1.84
SPG11-218ENST00000559754 SLC24A4Q8NFF2 622 aa3.57□□□□□ -1.84
SPG11-218ENST00000559754 FIBINQ8TAL6 211 aa3.57□□□□□ -1.84
SPG11-218ENST00000559754 KRT35Q92764 455 aa3.57□□□□□ -1.84
SPG11-218ENST00000559754 QRFPRQ96P65 431 aa3.57□□□□□ -1.84
SPG11-218ENST00000559754 OR2A14Q96R47 310 aa3.57□□□□□ -1.84
SPG11-218ENST00000559754 CMKLR1Q99788 373 aa3.57□□□□□ -1.84
SPG11-218ENST00000559754 NEURL2Q9BR09 285 aa3.57□□□□□ -1.84
SPG11-218ENST00000559754 SRSF8Q9BRL6 282 aaKnown RBP3.57□□□□□ -1.84
SPG11-218ENST00000559754 C1QTNF1Q9BXJ1 281 aa3.57□□□□□ -1.84
SPG11-218ENST00000559754 GLIS2Q9BZE0 524 aaPredicted RBP3.57□□□□□ -1.84
SPG11-218ENST00000559754 KCNN2Q9H2S1 579 aa3.57□□□□□ -1.84
SPG11-218ENST00000559754 MMADHCQ9H3L0 296 aaPredicted RBP3.57□□□□□ -1.84
SPG11-218ENST00000559754 HRH4Q9H3N8 390 aa3.57□□□□□ -1.84
SPG11-218ENST00000559754 ARHGEF38Q9NXL2 777 aa3.57□□□□□ -1.84
SPG11-218ENST00000559754 DDX43Q9NXZ2 648 aaKnown RBP3.57□□□□□ -1.84
SPG11-218ENST00000559754 COQ3Q9NZJ6 369 aa3.57□□□□□ -1.84
SPG11-218ENST00000559754 ABI3Q9P2A4 366 aa3.57□□□□□ -1.84
SPG11-218ENST00000559754 CACNG4Q9UBN1 327 aa3.57□□□□□ -1.84
SPG11-218ENST00000559754 AAR2Q9Y312 384 aaKnown RBP3.57□□□□□ -1.84
SPG11-218ENST00000559754 POMT1Q9Y6A1 747 aa3.57□□□□□ -1.84
SPG11-218ENST00000559754 CCDC69A6NI79 296 aa3.56□□□□□ -1.84
SPG11-218ENST00000559754 A6NL46 340 aa3.56□□□□□ -1.84
SPG11-218ENST00000559754 DNM1LO00429 736 aa3.56□□□□□ -1.84
SPG11-218ENST00000559754 ZBTB14O43829 449 aa3.56□□□□□ -1.84
SPG11-218ENST00000559754 ZG16O60844 167 aa3.56□□□□□ -1.84
SPG11-218ENST00000559754 KERAO60938 352 aa3.56□□□□□ -1.84
SPG11-218ENST00000559754 SLC25A12O75746 678 aa3.56□□□□□ -1.84
SPG11-218ENST00000559754 TPPPO94811 219 aa3.56□□□□□ -1.84
SPG11-218ENST00000559754 PNPP00491 289 aa3.56□□□□□ -1.84
SPG11-218ENST00000559754 AMBPP02760 352 aa3.56□□□□□ -1.84
SPG11-218ENST00000559754 MYOD1P15172 320 aa3.56□□□□□ -1.84
SPG11-218ENST00000559754 CASTP20810 708 aaKnown RBP3.56□□□□□ -1.84
SPG11-218ENST00000559754 PON1P27169 355 aa3.56□□□□□ -1.84
SPG11-218ENST00000559754 CORO1AP31146 461 aaKnown RBP3.56□□□□□ -1.84
SPG11-218ENST00000559754 HPDP32754 393 aaPredicted RBP3.56□□□□□ -1.84
SPG11-218ENST00000559754 CD86P42081 329 aa3.56□□□□□ -1.84
SPG11-218ENST00000559754 CCR3P51677 355 aa3.56□□□□□ -1.84
SPG11-218ENST00000559754 CSE1LP55060 971 aaKnown RBP3.56□□□□□ -1.84
SPG11-218ENST00000559754 F2RL1P55085 397 aa3.56□□□□□ -1.84
SPG11-218ENST00000559754 EVCP57679 992 aa3.56□□□□□ -1.84
SPG11-218ENST00000559754 CSNK2A1P68400 391 aaPredicted RBP3.56□□□□□ -1.84
SPG11-218ENST00000559754 PMP22Q01453 160 aa3.56□□□□□ -1.84
SPG11-218ENST00000559754 IL1RL1Q01638 556 aa3.56□□□□□ -1.84
SPG11-218ENST00000559754 ACTN3Q08043 901 aaPredicted RBP3.56□□□□□ -1.84
SPG11-218ENST00000559754 SREBF2Q12772 1141 aa3.56□□□□□ -1.84
SPG11-218ENST00000559754 ZNF234Q14588 700 aa3.56□□□□□ -1.84
SPG11-218ENST00000559754 PTPN14Q15678 1187 aa3.56□□□□□ -1.84
SPG11-218ENST00000559754 MEP1BQ16820 701 aa3.56□□□□□ -1.84
SPG11-218ENST00000559754 USP41Q3LFD5 358 aa3.56□□□□□ -1.84
SPG11-218ENST00000559754 C6orf141Q5SZD1 244 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms